Experiment: Phloretic Acid 2 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS23915 and PFLU_RS23920 are separated by 87 nucleotides PFLU_RS23920 and PFLU_RS23925 are separated by 1 nucleotides PFLU_RS23925 and PFLU_RS23930 are separated by 107 nucleotides PFLU_RS23930 and PFLU_RS23935 are separated by 7 nucleotides
PFLU_RS23915: PFLU_RS23915 - PHP domain-containing protein, at 5,358,418 to 5,359,281
_RS23915
PFLU_RS23920: PFLU_RS23920 - septation protein A, at 5,359,369 to 5,359,965
_RS23920
PFLU_RS23925: PFLU_RS23925 - YciI family protein, at 5,359,967 to 5,360,266
_RS23925
PFLU_RS23930: PFLU_RS23930 - translation initiation factor 2, at 5,360,374 to 5,360,781
_RS23930
PFLU_RS23935: PFLU_RS23935 - response regulator transcription factor, at 5,360,789 to 5,361,466
_RS23935
Position (kb) 5359
5360
5361 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5358.967 kb on + strand, within PFLU_RS23915 at 5358.967 kb on + strand, within PFLU_RS23915 at 5358.967 kb on + strand, within PFLU_RS23915 at 5358.967 kb on + strand, within PFLU_RS23915 at 5358.967 kb on + strand, within PFLU_RS23915 at 5358.968 kb on - strand, within PFLU_RS23915 at 5358.968 kb on - strand, within PFLU_RS23915 at 5358.968 kb on - strand, within PFLU_RS23915 at 5359.291 kb on + strand at 5359.291 kb on + strand at 5359.291 kb on + strand at 5359.291 kb on + strand at 5359.292 kb on - strand at 5359.292 kb on - strand at 5359.292 kb on - strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.334 kb on + strand at 5359.334 kb on + strand at 5359.334 kb on + strand at 5359.334 kb on + strand at 5359.334 kb on + strand at 5359.334 kb on + strand at 5359.334 kb on + strand at 5359.335 kb on - strand at 5359.335 kb on - strand at 5359.335 kb on - strand at 5359.335 kb on - strand at 5359.335 kb on - strand at 5359.335 kb on - strand at 5359.335 kb on - strand at 5359.335 kb on - strand at 5359.335 kb on - strand at 5359.335 kb on - strand at 5359.335 kb on - strand at 5359.337 kb on + strand at 5359.337 kb on + strand at 5359.337 kb on + strand at 5359.337 kb on + strand at 5359.337 kb on + strand at 5359.337 kb on + strand at 5359.337 kb on + strand at 5359.337 kb on + strand at 5359.337 kb on + strand at 5359.337 kb on + strand at 5359.337 kb on + strand at 5359.338 kb on - strand at 5359.338 kb on - strand at 5359.365 kb on + strand at 5359.365 kb on + strand at 5359.365 kb on + strand at 5359.365 kb on + strand at 5359.366 kb on - strand at 5359.366 kb on - strand at 5359.905 kb on + strand, within PFLU_RS23920 at 5359.905 kb on + strand, within PFLU_RS23920 at 5359.905 kb on + strand, within PFLU_RS23920 at 5359.905 kb on + strand, within PFLU_RS23920 at 5359.905 kb on + strand, within PFLU_RS23920 at 5359.906 kb on - strand at 5359.906 kb on - strand at 5359.909 kb on + strand at 5359.910 kb on - strand at 5359.973 kb on + strand at 5359.973 kb on + strand at 5359.973 kb on + strand at 5359.973 kb on + strand at 5359.974 kb on - strand at 5359.974 kb on - strand at 5359.974 kb on - strand at 5360.074 kb on + strand, within PFLU_RS23925 at 5360.074 kb on + strand, within PFLU_RS23925 at 5360.074 kb on + strand, within PFLU_RS23925 at 5360.074 kb on + strand, within PFLU_RS23925 at 5360.074 kb on + strand, within PFLU_RS23925 at 5360.074 kb on + strand, within PFLU_RS23925 at 5360.074 kb on + strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.204 kb on + strand, within PFLU_RS23925 at 5360.204 kb on + strand, within PFLU_RS23925 at 5360.204 kb on + strand, within PFLU_RS23925 at 5360.204 kb on + strand, within PFLU_RS23925 at 5360.204 kb on + strand, within PFLU_RS23925 at 5360.204 kb on + strand, within PFLU_RS23925 at 5360.205 kb on - strand, within PFLU_RS23925 at 5360.205 kb on - strand, within PFLU_RS23925 at 5360.205 kb on - strand, within PFLU_RS23925 at 5360.205 kb on - strand, within PFLU_RS23925 at 5360.205 kb on - strand, within PFLU_RS23925 at 5360.205 kb on - strand, within PFLU_RS23925 at 5360.205 kb on - strand, within PFLU_RS23925 at 5360.286 kb on + strand at 5360.286 kb on + strand at 5360.286 kb on + strand at 5360.287 kb on - strand at 5360.287 kb on - strand at 5360.287 kb on - strand at 5360.287 kb on - strand at 5360.306 kb on + strand at 5360.306 kb on + strand at 5360.306 kb on + strand at 5360.306 kb on + strand at 5360.306 kb on + strand at 5360.306 kb on + strand at 5360.306 kb on + strand at 5360.307 kb on - strand at 5360.307 kb on - strand at 5360.307 kb on - strand at 5360.307 kb on - strand at 5360.317 kb on + strand at 5360.317 kb on + strand at 5360.317 kb on + strand at 5360.318 kb on - strand at 5360.318 kb on - strand at 5360.349 kb on + strand at 5360.350 kb on - strand at 5360.350 kb on - strand at 5360.381 kb on + strand at 5360.381 kb on + strand at 5360.381 kb on + strand at 5360.381 kb on + strand at 5360.381 kb on + strand at 5360.381 kb on + strand at 5360.381 kb on + strand at 5360.382 kb on - strand at 5360.382 kb on - strand at 5360.382 kb on - strand at 5360.382 kb on - strand at 5360.382 kb on - strand at 5360.382 kb on - strand at 5360.382 kb on - strand at 5360.382 kb on - strand at 5360.382 kb on - strand at 5360.382 kb on - strand at 5360.408 kb on + strand at 5360.409 kb on - strand at 5360.571 kb on + strand, within PFLU_RS23930 at 5360.775 kb on - strand at 5360.775 kb on - strand at 5360.803 kb on - strand at 5360.803 kb on - strand at 5360.803 kb on - strand at 5360.808 kb on + strand at 5360.808 kb on + strand at 5360.808 kb on + strand at 5360.808 kb on + strand at 5360.808 kb on + strand at 5360.808 kb on + strand at 5360.808 kb on + strand at 5360.808 kb on + strand at 5360.808 kb on + strand at 5360.809 kb on - strand at 5360.809 kb on - strand at 5360.809 kb on - strand at 5360.809 kb on - strand at 5360.809 kb on - strand at 5360.809 kb on - strand at 5360.809 kb on - strand at 5360.809 kb on - strand at 5360.809 kb on - strand at 5360.809 kb on - strand at 5360.809 kb on - strand at 5360.809 kb on - strand at 5360.809 kb on - strand at 5360.946 kb on + strand, within PFLU_RS23935 at 5360.946 kb on + strand, within PFLU_RS23935 at 5360.946 kb on + strand, within PFLU_RS23935 at 5360.946 kb on + strand, within PFLU_RS23935 at 5360.946 kb on + strand, within PFLU_RS23935 at 5360.946 kb on + strand, within PFLU_RS23935 at 5360.946 kb on + strand, within PFLU_RS23935 at 5360.946 kb on + strand, within PFLU_RS23935 at 5360.947 kb on - strand, within PFLU_RS23935 at 5360.947 kb on - strand, within PFLU_RS23935 at 5360.947 kb on - strand, within PFLU_RS23935 at 5360.947 kb on - strand, within PFLU_RS23935 at 5360.947 kb on - strand, within PFLU_RS23935 at 5360.947 kb on - strand, within PFLU_RS23935 at 5360.947 kb on - strand, within PFLU_RS23935 at 5360.947 kb on - strand, within PFLU_RS23935 at 5360.947 kb on - strand, within PFLU_RS23935 at 5360.947 kb on - strand, within PFLU_RS23935 at 5360.947 kb on - strand, within PFLU_RS23935 at 5360.947 kb on - strand, within PFLU_RS23935 at 5361.052 kb on + strand, within PFLU_RS23935 at 5361.083 kb on + strand, within PFLU_RS23935 at 5361.083 kb on + strand, within PFLU_RS23935 at 5361.083 kb on + strand, within PFLU_RS23935 at 5361.084 kb on - strand, within PFLU_RS23935 at 5361.084 kb on - strand, within PFLU_RS23935 at 5361.167 kb on - strand, within PFLU_RS23935
Per-strain Table
Position Strand Gene LocusTag Fraction Phloretic Acid 2 mM (C) remove 5,358,967 + PFLU_RS23915 0.64 +2.6 5,358,967 + PFLU_RS23915 0.64 -0.0 5,358,967 + PFLU_RS23915 0.64 +1.0 5,358,967 + PFLU_RS23915 0.64 -0.8 5,358,967 + PFLU_RS23915 0.64 -2.7 5,358,968 - PFLU_RS23915 0.64 +1.1 5,358,968 - PFLU_RS23915 0.64 -2.2 5,358,968 - PFLU_RS23915 0.64 +0.6 5,359,291 + -0.5 5,359,291 + -1.0 5,359,291 + -2.6 5,359,291 + -1.4 5,359,292 - +2.9 5,359,292 - -1.8 5,359,292 - +0.5 5,359,322 + -2.1 5,359,322 + +3.8 5,359,322 + -1.5 5,359,322 + +0.9 5,359,322 + +3.6 5,359,322 + -1.9 5,359,322 + -0.5 5,359,322 + +1.4 5,359,322 + +1.5 5,359,322 + -2.4 5,359,322 + +0.3 5,359,323 - +0.4 5,359,323 - +0.7 5,359,323 - -2.1 5,359,323 - -2.6 5,359,323 - -0.8 5,359,323 - -1.7 5,359,323 - -1.0 5,359,323 - -0.6 5,359,323 - -1.6 5,359,323 - +2.3 5,359,323 - -1.6 5,359,323 - -0.8 5,359,323 - -1.4 5,359,323 - -1.2 5,359,323 - -0.5 5,359,323 - -1.0 5,359,323 - +1.7 5,359,323 - +0.8 5,359,334 + -1.0 5,359,334 + +1.2 5,359,334 + -1.2 5,359,334 + +1.7 5,359,334 + -1.3 5,359,334 + -2.2 5,359,334 + +2.0 5,359,335 - +0.2 5,359,335 - +2.2 5,359,335 - -0.0 5,359,335 - -0.6 5,359,335 - -0.8 5,359,335 - +0.4 5,359,335 - +1.0 5,359,335 - -0.4 5,359,335 - -2.8 5,359,335 - -1.4 5,359,335 - -0.4 5,359,337 + +0.8 5,359,337 + -0.8 5,359,337 + +0.3 5,359,337 + +1.8 5,359,337 + +0.4 5,359,337 + -2.6 5,359,337 + -1.4 5,359,337 + +1.0 5,359,337 + +0.3 5,359,337 + -1.0 5,359,337 + -2.5 5,359,338 - -0.6 5,359,338 - -0.6 5,359,365 + -0.0 5,359,365 + -0.0 5,359,365 + -0.4 5,359,365 + +1.0 5,359,366 - +1.0 5,359,366 - +2.0 5,359,905 + PFLU_RS23920 0.90 +2.7 5,359,905 + PFLU_RS23920 0.90 -0.8 5,359,905 + PFLU_RS23920 0.90 -1.2 5,359,905 + PFLU_RS23920 0.90 +0.4 5,359,905 + PFLU_RS23920 0.90 -0.8 5,359,906 - +2.0 5,359,906 - +2.0 5,359,909 + +2.0 5,359,910 - +2.0 5,359,973 + -1.4 5,359,973 + -0.6 5,359,973 + -0.4 5,359,973 + +2.0 5,359,974 - -1.2 5,359,974 - +3.0 5,359,974 - +3.0 5,360,074 + PFLU_RS23925 0.36 -1.4 5,360,074 + PFLU_RS23925 0.36 +0.1 5,360,074 + PFLU_RS23925 0.36 +2.6 5,360,074 + PFLU_RS23925 0.36 -0.4 5,360,074 + PFLU_RS23925 0.36 -0.7 5,360,074 + PFLU_RS23925 0.36 +2.0 5,360,074 + PFLU_RS23925 0.36 -0.0 5,360,075 - PFLU_RS23925 0.36 -2.1 5,360,075 - PFLU_RS23925 0.36 -2.4 5,360,075 - PFLU_RS23925 0.36 -1.2 5,360,075 - PFLU_RS23925 0.36 +1.6 5,360,075 - PFLU_RS23925 0.36 +2.0 5,360,075 - PFLU_RS23925 0.36 -1.4 5,360,075 - PFLU_RS23925 0.36 +2.8 5,360,075 - PFLU_RS23925 0.36 +0.1 5,360,075 - PFLU_RS23925 0.36 +1.1 5,360,075 - PFLU_RS23925 0.36 +2.2 5,360,204 + PFLU_RS23925 0.79 +0.5 5,360,204 + PFLU_RS23925 0.79 +2.5 5,360,204 + PFLU_RS23925 0.79 -0.7 5,360,204 + PFLU_RS23925 0.79 +2.9 5,360,204 + PFLU_RS23925 0.79 +2.3 5,360,204 + PFLU_RS23925 0.79 -1.4 5,360,205 - PFLU_RS23925 0.79 -1.8 5,360,205 - PFLU_RS23925 0.79 -2.4 5,360,205 - PFLU_RS23925 0.79 +0.8 5,360,205 - PFLU_RS23925 0.79 +2.2 5,360,205 - PFLU_RS23925 0.79 +3.1 5,360,205 - PFLU_RS23925 0.79 +2.9 5,360,205 - PFLU_RS23925 0.79 +3.0 5,360,286 + +1.0 5,360,286 + -0.4 5,360,286 + -1.5 5,360,287 - -1.0 5,360,287 - +2.0 5,360,287 - +1.8 5,360,287 - +0.4 5,360,306 + +1.0 5,360,306 + -0.8 5,360,306 + +1.0 5,360,306 + +1.7 5,360,306 + +1.0 5,360,306 + +1.7 5,360,306 + -0.6 5,360,307 - -3.1 5,360,307 - -3.4 5,360,307 - -2.7 5,360,307 - -2.4 5,360,317 + +2.3 5,360,317 + -1.2 5,360,317 + +3.6 5,360,318 - +1.2 5,360,318 - -1.0 5,360,349 + +1.2 5,360,350 - +2.1 5,360,350 - +1.5 5,360,381 + +1.2 5,360,381 + +1.3 5,360,381 + +1.3 5,360,381 + -3.0 5,360,381 + +1.7 5,360,381 + -1.2 5,360,381 + +2.0 5,360,382 - -2.6 5,360,382 - +0.4 5,360,382 - -1.6 5,360,382 - -0.0 5,360,382 - -0.0 5,360,382 - +2.0 5,360,382 - +2.0 5,360,382 - +2.9 5,360,382 - -2.1 5,360,382 - +0.3 5,360,408 + -1.7 5,360,409 - -1.6 5,360,571 + PFLU_RS23930 0.48 -0.8 5,360,775 - +2.0 5,360,775 - -1.6 5,360,803 - +2.0 5,360,803 - -2.2 5,360,803 - -1.4 5,360,808 + -1.9 5,360,808 + +2.0 5,360,808 + -1.5 5,360,808 + -2.1 5,360,808 + -1.2 5,360,808 + -1.6 5,360,808 + -2.2 5,360,808 + -3.2 5,360,808 + -2.1 5,360,809 - -0.0 5,360,809 - +0.6 5,360,809 - +2.9 5,360,809 - +1.6 5,360,809 - -1.4 5,360,809 - +2.1 5,360,809 - -3.2 5,360,809 - +0.6 5,360,809 - -2.4 5,360,809 - -0.4 5,360,809 - +0.3 5,360,809 - -1.6 5,360,809 - +2.7 5,360,946 + PFLU_RS23935 0.23 +0.4 5,360,946 + PFLU_RS23935 0.23 +1.4 5,360,946 + PFLU_RS23935 0.23 +1.6 5,360,946 + PFLU_RS23935 0.23 +2.3 5,360,946 + PFLU_RS23935 0.23 +0.2 5,360,946 + PFLU_RS23935 0.23 -0.8 5,360,946 + PFLU_RS23935 0.23 -3.3 5,360,946 + PFLU_RS23935 0.23 +0.6 5,360,947 - PFLU_RS23935 0.23 +1.6 5,360,947 - PFLU_RS23935 0.23 +0.4 5,360,947 - PFLU_RS23935 0.23 +0.4 5,360,947 - PFLU_RS23935 0.23 +2.5 5,360,947 - PFLU_RS23935 0.23 +3.6 5,360,947 - PFLU_RS23935 0.23 -2.1 5,360,947 - PFLU_RS23935 0.23 -1.4 5,360,947 - PFLU_RS23935 0.23 +2.2 5,360,947 - PFLU_RS23935 0.23 +1.2 5,360,947 - PFLU_RS23935 0.23 -1.4 5,360,947 - PFLU_RS23935 0.23 -1.5 5,360,947 - PFLU_RS23935 0.23 -0.4 5,361,052 + PFLU_RS23935 0.39 +1.5 5,361,083 + PFLU_RS23935 0.43 -0.6 5,361,083 + PFLU_RS23935 0.43 -1.0 5,361,083 + PFLU_RS23935 0.43 +1.3 5,361,084 - PFLU_RS23935 0.44 -0.6 5,361,084 - PFLU_RS23935 0.44 +1.4 5,361,167 - PFLU_RS23935 0.56 +0.2
Or see this region's nucleotide sequence