Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17150

Experiment: Phloretic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phloretic Acid 2 mM (C)
3,893,225	+				-2.5
3,893,226	-				-0.5
3,893,443	+		PFLU_RS17145	0.40	-1.1
3,893,510	+		PFLU_RS17145	0.51	+0.8
3,893,510	+		PFLU_RS17145	0.51	-0.1
3,893,510	+		PFLU_RS17145	0.51	-0.1
3,893,510	+		PFLU_RS17145	0.51	+0.5
3,893,511	-		PFLU_RS17145	0.51	+0.4
3,893,511	-		PFLU_RS17145	0.51	+2.0
3,893,511	-		PFLU_RS17145	0.51	-0.1
3,893,511	-		PFLU_RS17145	0.51	-0.1
3,893,511	-		PFLU_RS17145	0.51	-2.0
3,893,525	+		PFLU_RS17145	0.54	-0.9
3,893,525	+		PFLU_RS17145	0.54	-0.5
3,893,525	+		PFLU_RS17145	0.54	-2.4
3,893,526	-		PFLU_RS17145	0.54	+2.0
3,893,526	-		PFLU_RS17145	0.54	-2.6
3,893,531	+		PFLU_RS17145	0.55	+2.3
3,893,531	+		PFLU_RS17145	0.55	+3.5
3,893,531	+		PFLU_RS17145	0.55	+1.6
3,893,532	-		PFLU_RS17145	0.55	-1.4
3,893,532	-		PFLU_RS17145	0.55	+0.6
3,893,532	-		PFLU_RS17145	0.55	+1.5
3,893,532	-		PFLU_RS17145	0.55	-2.8
3,893,532	-		PFLU_RS17145	0.55	+0.4
3,893,627	+		PFLU_RS17145	0.71	-0.9
3,893,628	-		PFLU_RS17145	0.71	+1.0
3,893,817	-				-2.4
3,893,817	-				+2.2
3,893,817	-				-0.4
3,893,817	-				-1.5
3,893,832	+				+1.3
3,893,903	+				-1.1
3,893,904	-				-1.0
3,893,904	-				-2.0
3,893,904	-				-2.4
3,893,971	-				+0.2
3,894,019	-				-1.0
3,894,100	+				+1.4
3,894,101	-				-1.6
3,894,130	+		PFLU_RS17150	0.17	-2.1
3,894,130	+		PFLU_RS17150	0.17	-1.1
3,894,131	-		PFLU_RS17150	0.18	-1.9
3,894,154	+		PFLU_RS17150	0.31	-0.2
3,894,155	-		PFLU_RS17150	0.31	-3.1
3,894,155	-		PFLU_RS17150	0.31	+2.4
3,894,155	-		PFLU_RS17150	0.31	-2.7
3,894,166	+		PFLU_RS17150	0.37	+0.9
3,894,166	+		PFLU_RS17150	0.37	-0.6
3,894,166	+		PFLU_RS17150	0.37	-2.5
3,894,166	+		PFLU_RS17150	0.37	+1.4
3,894,166	+		PFLU_RS17150	0.37	+0.4
3,894,167	-		PFLU_RS17150	0.38	+0.4
3,894,293	+				-0.1
3,894,293	+				-1.9
3,894,293	+				+1.7
3,894,294	-				+0.6
3,894,294	-				-1.6
3,894,294	-				-0.4
3,894,294	-				+1.4
3,894,337	+				-1.4
3,894,338	-				-0.9
3,894,338	-				+1.8
3,894,338	-				+0.4
3,894,338	-				-2.0
3,894,386	+				-2.5
3,894,389	+				-0.6
3,894,390	-				-2.9
3,894,390	-				+1.4
3,894,390	-				-1.1
3,894,390	-				+0.7
3,894,395	+				-1.1
3,894,395	+				+0.3
3,894,396	-				+1.6
3,894,396	-				+2.1
3,894,437	-				-2.0
3,894,710	-		PFLU_RS17155	0.23	-2.4
3,894,710	-		PFLU_RS17155	0.23	+1.3
3,894,738	+		PFLU_RS17155	0.26	-2.4
3,894,738	+		PFLU_RS17155	0.26	-0.6
3,894,738	+		PFLU_RS17155	0.26	+1.0
3,894,739	-		PFLU_RS17155	0.26	-1.7
3,894,739	-		PFLU_RS17155	0.26	-2.3
3,894,821	-		PFLU_RS17155	0.33	-3.1
3,894,821	-		PFLU_RS17155	0.33	-1.7
3,894,980	-		PFLU_RS17155	0.46	-2.0
3,894,985	+		PFLU_RS17155	0.47	-0.8
3,895,027	+		PFLU_RS17155	0.50	-0.3
3,895,027	+		PFLU_RS17155	0.50	+0.7
3,895,027	+		PFLU_RS17155	0.50	+1.0
3,895,027	+		PFLU_RS17155	0.50	-0.9
3,895,027	+		PFLU_RS17155	0.50	+1.9
3,895,027	+		PFLU_RS17155	0.50	+0.9
3,895,028	-		PFLU_RS17155	0.50	-1.6
3,895,028	-		PFLU_RS17155	0.50	+1.9
3,895,028	-		PFLU_RS17155	0.50	-3.0
3,895,028	-		PFLU_RS17155	0.50	+2.2
3,895,028	-		PFLU_RS17155	0.50	+1.3
3,895,195	+		PFLU_RS17155	0.65	+1.1
3,895,195	+		PFLU_RS17155	0.65	-1.9
3,895,213	+		PFLU_RS17155	0.66	-2.4
3,895,214	-		PFLU_RS17155	0.66	-0.1