Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14440

Experiment: Phloretic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phloretic Acid 2 mM (C)
3,234,785	+		PFLU_RS14435	0.52	-1.1
3,234,785	+		PFLU_RS14435	0.52	+2.3
3,234,785	+		PFLU_RS14435	0.52	+1.7
3,234,785	+		PFLU_RS14435	0.52	+2.1
3,234,786	-		PFLU_RS14435	0.52	+1.7
3,234,786	-		PFLU_RS14435	0.52	-0.9
3,234,786	-		PFLU_RS14435	0.52	+2.3
3,234,834	+		PFLU_RS14435	0.56	-1.2
3,234,834	+		PFLU_RS14435	0.56	+1.6
3,234,834	+		PFLU_RS14435	0.56	-0.1
3,234,834	+		PFLU_RS14435	0.56	+0.9
3,234,834	+		PFLU_RS14435	0.56	+1.6
3,234,835	-		PFLU_RS14435	0.56	+2.2
3,234,878	+		PFLU_RS14435	0.59	-2.1
3,234,878	+		PFLU_RS14435	0.59	-2.3
3,234,902	+		PFLU_RS14435	0.61	-0.5
3,234,902	+		PFLU_RS14435	0.61	+1.2
3,234,918	+		PFLU_RS14435	0.62	+2.1
3,234,919	-		PFLU_RS14435	0.62	+0.4
3,234,919	-		PFLU_RS14435	0.62	+0.5
3,235,110	+		PFLU_RS14435	0.77	+0.7
3,235,110	+		PFLU_RS14435	0.77	-1.9
3,235,110	+		PFLU_RS14435	0.77	-1.5
3,235,110	+		PFLU_RS14435	0.77	+2.3
3,235,110	+		PFLU_RS14435	0.77	+3.3
3,235,110	+		PFLU_RS14435	0.77	-2.7
3,235,110	+		PFLU_RS14435	0.77	-0.5
3,235,110	+		PFLU_RS14435	0.77	+0.1
3,235,110	+		PFLU_RS14435	0.77	+3.5
3,235,110	+		PFLU_RS14435	0.77	+1.5
3,235,110	+		PFLU_RS14435	0.77	-1.9
3,235,110	+		PFLU_RS14435	0.77	+1.7
3,235,110	+		PFLU_RS14435	0.77	+0.5
3,235,110	+		PFLU_RS14435	0.77	-0.1
3,235,110	+		PFLU_RS14435	0.77	-2.1
3,235,110	+		PFLU_RS14435	0.77	+1.6
3,235,110	+		PFLU_RS14435	0.77	+1.3
3,235,111	-		PFLU_RS14435	0.77	+1.5
3,235,111	-		PFLU_RS14435	0.77	+2.0
3,235,111	-		PFLU_RS14435	0.77	-2.2
3,235,111	-		PFLU_RS14435	0.77	+1.2
3,235,111	-		PFLU_RS14435	0.77	+0.5
3,235,111	-		PFLU_RS14435	0.77	-1.9
3,235,111	-		PFLU_RS14435	0.77	+1.3
3,235,111	-		PFLU_RS14435	0.77	-0.4
3,235,111	-		PFLU_RS14435	0.77	+0.5
3,235,111	-		PFLU_RS14435	0.77	+2.8
3,235,111	-		PFLU_RS14435	0.77	-2.4
3,235,111	-		PFLU_RS14435	0.77	-2.0
3,235,111	-		PFLU_RS14435	0.77	-1.0
3,235,111	-		PFLU_RS14435	0.77	+0.9
3,235,111	-		PFLU_RS14435	0.77	-0.2
3,235,112	+		PFLU_RS14435	0.77	-0.0
3,235,112	+		PFLU_RS14435	0.77	-1.3
3,235,112	+		PFLU_RS14435	0.77	+3.4
3,235,112	+		PFLU_RS14435	0.77	+2.6
3,235,112	+		PFLU_RS14435	0.77	-0.9
3,235,112	+		PFLU_RS14435	0.77	-0.3
3,235,112	+		PFLU_RS14435	0.77	+1.5
3,235,112	+		PFLU_RS14435	0.77	+1.5
3,235,112	+		PFLU_RS14435	0.77	-2.6
3,235,112	+		PFLU_RS14435	0.77	-1.9
3,235,113	-		PFLU_RS14435	0.77	-1.1
3,235,113	-		PFLU_RS14435	0.77	+2.0
3,235,113	-		PFLU_RS14435	0.77	+1.7
3,235,113	-		PFLU_RS14435	0.77	-1.5
3,235,113	-		PFLU_RS14435	0.77	-1.7
3,235,113	-		PFLU_RS14435	0.77	+3.0
3,235,113	-		PFLU_RS14435	0.77	-1.7
3,235,113	-		PFLU_RS14435	0.77	-2.2
3,235,113	-		PFLU_RS14435	0.77	+1.2
3,235,113	-		PFLU_RS14435	0.77	-0.1
3,235,113	-		PFLU_RS14435	0.77	-0.3
3,235,113	-		PFLU_RS14435	0.77	-0.0
3,235,113	-		PFLU_RS14435	0.77	+1.5
3,235,113	-		PFLU_RS14435	0.77	-2.0
3,235,113	-		PFLU_RS14435	0.77	-1.3
3,235,113	-		PFLU_RS14435	0.77	-1.9
3,235,113	-		PFLU_RS14435	0.77	-1.9
3,235,113	-		PFLU_RS14435	0.77	-2.2
3,235,113	-		PFLU_RS14435	0.77	-0.5
3,235,113	-		PFLU_RS14435	0.77	-0.5
3,235,113	-		PFLU_RS14435	0.77	+1.8
3,235,113	-		PFLU_RS14435	0.77	-1.9
3,235,113	-		PFLU_RS14435	0.77	-0.9
3,235,113	-		PFLU_RS14435	0.77	+0.3
3,235,364	-				-0.1
3,235,448	+				+0.8
3,235,448	+				+2.5
3,235,448	+				+2.1
3,235,449	-				-0.9
3,235,449	-				-1.7
3,235,449	-				-0.9
3,235,449	-				-2.1
3,235,449	-				+1.5
3,235,449	-				-1.2
3,235,449	-				-2.1
3,235,525	+				-0.3
3,235,525	+				-0.9
3,235,526	-				-1.7
3,235,526	-				-2.1
3,235,541	+				+0.5
3,235,594	-				-1.7
3,235,614	+				+2.2
3,235,614	+				+1.7
3,235,705	+		PFLU_RS14440	0.25	-0.7
3,235,784	-		PFLU_RS14440	0.61	-1.5
3,235,945	-				-0.9
3,235,952	+				-0.1
3,235,952	+				+3.3
3,235,961	-				-2.5
3,236,200	+		PFLU_RS14445	0.38	+3.4
3,236,302	+		PFLU_RS14445	0.52	-0.5
3,236,329	+		PFLU_RS14445	0.56	-1.5
3,236,329	+		PFLU_RS14445	0.56	+2.6
3,236,356	+		PFLU_RS14445	0.60	+1.9
3,236,356	+		PFLU_RS14445	0.60	+0.0
3,236,356	+		PFLU_RS14445	0.60	-0.5
3,236,356	+		PFLU_RS14445	0.60	+0.8
3,236,356	+		PFLU_RS14445	0.60	+0.7
3,236,356	+		PFLU_RS14445	0.60	+0.5
3,236,356	+		PFLU_RS14445	0.60	-0.5
3,236,357	-		PFLU_RS14445	0.60	-2.1
3,236,357	-		PFLU_RS14445	0.60	+3.0
3,236,357	-		PFLU_RS14445	0.60	+1.0
3,236,357	-		PFLU_RS14445	0.60	-0.3
3,236,357	-		PFLU_RS14445	0.60	-1.9
3,236,359	-		PFLU_RS14445	0.60	+1.9
3,236,359	-		PFLU_RS14445	0.60	+1.3
3,236,400	+		PFLU_RS14445	0.66	-0.5
3,236,599	+				+2.8
3,236,600	-				-1.4
3,236,600	-				-0.1
3,236,637	+				+0.5
3,236,637	+				-0.4
3,236,637	+				-2.5
3,236,637	+				+0.5
3,236,637	+				-2.1
3,236,637	+				-1.4
3,236,637	+				-0.1
3,236,637	+				+1.5
3,236,637	+				-2.4
3,236,637	+				+1.5
3,236,637	+				+0.5
3,236,638	-				+1.8
3,236,638	-				+4.0
3,236,638	-				+1.6
3,236,638	-				-0.5
3,236,638	-				+3.2
3,236,638	-				-1.1
3,236,638	-				-2.4
3,236,638	-				-2.2
3,236,690	+		PFLU_RS14450	0.19	-1.7
3,236,811	-		PFLU_RS14450	0.58	+4.5
3,236,832	+		PFLU_RS14450	0.64	-1.4
3,236,832	+		PFLU_RS14450	0.64	-1.5
3,236,833	-		PFLU_RS14450	0.65	-2.5
3,236,833	-		PFLU_RS14450	0.65	+4.6