Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07550

Experiment: Phloretic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phloretic Acid 2 mM (C)
1,675,419	+		PFLU_RS07540	0.70	-0.9
1,675,419	+		PFLU_RS07540	0.70	-0.6
1,675,419	+		PFLU_RS07540	0.70	+0.3
1,675,653	+				+0.9
1,675,673	+				+3.4
1,675,674	-				-1.4
1,675,674	-				+1.1
1,675,732	+		PFLU_RS07545	0.13	-0.7
1,675,733	-		PFLU_RS07545	0.13	-0.9
1,675,733	-		PFLU_RS07545	0.13	+2.7
1,675,733	-		PFLU_RS07545	0.13	+0.3
1,675,733	-		PFLU_RS07545	0.13	-0.4
1,675,742	+		PFLU_RS07545	0.15	+2.1
1,675,742	+		PFLU_RS07545	0.15	+1.9
1,675,853	+		PFLU_RS07545	0.35	+0.9
1,675,854	-		PFLU_RS07545	0.36	+2.4
1,675,854	-		PFLU_RS07545	0.36	-0.4
1,675,964	+		PFLU_RS07545	0.56	-0.4
1,675,964	+		PFLU_RS07545	0.56	-2.6
1,675,964	+		PFLU_RS07545	0.56	+0.5
1,675,964	+		PFLU_RS07545	0.56	+0.2
1,675,965	-		PFLU_RS07545	0.56	-0.1
1,675,965	-		PFLU_RS07545	0.56	+1.9
1,675,965	-		PFLU_RS07545	0.56	-0.2
1,675,965	-		PFLU_RS07545	0.56	+0.4
1,675,965	-		PFLU_RS07545	0.56	-0.1
1,676,030	+		PFLU_RS07545	0.68	+0.5
1,676,030	+		PFLU_RS07545	0.68	+2.0
1,676,030	+		PFLU_RS07545	0.68	-1.6
1,676,031	-		PFLU_RS07545	0.68	-0.9
1,676,031	-		PFLU_RS07545	0.68	+0.5
1,676,036	+		PFLU_RS07545	0.69	-1.3
1,676,036	+		PFLU_RS07545	0.69	+1.1
1,676,036	+		PFLU_RS07545	0.69	+0.1
1,676,036	+		PFLU_RS07545	0.69	+2.0
1,676,036	+		PFLU_RS07545	0.69	+0.2
1,676,036	+		PFLU_RS07545	0.69	-0.4
1,676,036	+		PFLU_RS07545	0.69	-0.7
1,676,036	+		PFLU_RS07545	0.69	-0.9
1,676,036	+		PFLU_RS07545	0.69	-0.9
1,676,037	-		PFLU_RS07545	0.69	+1.9
1,676,037	-		PFLU_RS07545	0.69	+0.5
1,676,037	-		PFLU_RS07545	0.69	+0.8
1,676,139	+		PFLU_RS07545	0.88	-1.3
1,676,139	+		PFLU_RS07545	0.88	-1.7
1,676,140	-		PFLU_RS07545	0.88	-2.1
1,676,140	-		PFLU_RS07545	0.88	-0.9
1,676,202	-				+0.1
1,676,264	+				+0.4
1,676,264	+				-1.7
1,676,264	+				+0.9
1,676,264	+				+2.5
1,676,264	+				-0.7
1,676,264	+				+1.5
1,676,264	+				+0.9
1,676,264	+				+1.4
1,676,264	+				-1.8
1,676,265	-				+0.3
1,676,265	-				+1.9
1,676,265	-				+0.7
1,676,265	-				+2.6
1,676,265	-				+2.4
1,676,265	-				-2.0
1,676,265	-				-2.7
1,676,265	-				-0.4
1,676,265	-				-2.9
1,676,265	-				+2.5
1,676,265	-				-0.7
1,676,265	-				-1.9
1,676,316	+				+0.6
1,676,316	+				-2.0
1,676,380	+				+2.9
1,676,645	+		PFLU_RS07550	0.34	-2.0
1,676,646	-		PFLU_RS07550	0.34	-1.3
1,676,677	+		PFLU_RS07550	0.38	-0.4
1,676,678	-		PFLU_RS07550	0.38	-2.3
1,676,678	-		PFLU_RS07550	0.38	+0.3
1,676,678	-		PFLU_RS07550	0.38	+0.3
1,676,719	+		PFLU_RS07550	0.42	-2.3
1,676,719	+		PFLU_RS07550	0.42	+0.3
1,676,720	-		PFLU_RS07550	0.42	+0.7
1,676,720	-		PFLU_RS07550	0.42	+0.6
1,676,731	+		PFLU_RS07550	0.44	-2.3
1,676,731	+		PFLU_RS07550	0.44	+1.7
1,676,731	+		PFLU_RS07550	0.44	+0.9
1,676,731	+		PFLU_RS07550	0.44	+2.4
1,676,731	+		PFLU_RS07550	0.44	+3.5
1,676,731	+		PFLU_RS07550	0.44	+3.4
1,676,731	+		PFLU_RS07550	0.44	+1.0
1,676,731	+		PFLU_RS07550	0.44	-2.5
1,676,732	-		PFLU_RS07550	0.44	+2.0
1,676,732	-		PFLU_RS07550	0.44	+1.5
1,676,732	-		PFLU_RS07550	0.44	+2.0
1,676,732	-		PFLU_RS07550	0.44	-1.8
1,676,732	-		PFLU_RS07550	0.44	+0.3
1,677,052	+		PFLU_RS07550	0.78	+3.1
1,677,268	+				+0.8
1,677,268	+				+2.1
1,677,269	-				-0.7
1,677,269	-				+0.9
1,677,287	-				+1.1
1,677,289	+				-0.4
1,677,289	+				-0.4
1,677,289	+				-1.7
1,677,289	+				-1.3
1,677,338	+				+2.9
1,677,339	-				-0.1
1,677,339	-				+1.8
1,677,380	-				-1.0
1,677,394	+				-0.2
1,677,394	+				+0.3
1,677,394	+				+0.2
1,677,394	+				-0.4
1,677,394	+				-2.2
1,677,394	+				+1.5
1,677,394	+				+1.1
1,677,395	-				+0.5
1,677,395	-				+1.8
1,677,395	-				+4.0
1,677,395	-				-0.1
1,677,395	-				-0.2
1,677,395	-				-0.9
1,677,411	+				-0.3
1,677,412	-				-1.9
1,677,472	+				+1.1
1,677,473	-				+1.1
1,677,623	+		PFLU_RS07555	0.26	+0.8
1,677,623	+		PFLU_RS07555	0.26	-0.4
1,677,662	+		PFLU_RS07555	0.32	-0.1
1,677,662	+		PFLU_RS07555	0.32	-0.7
1,677,662	+		PFLU_RS07555	0.32	-1.8
1,677,663	-		PFLU_RS07555	0.32	-1.6
1,677,663	-		PFLU_RS07555	0.32	+1.8
1,677,663	-		PFLU_RS07555	0.32	+1.3
1,677,663	-		PFLU_RS07555	0.32	-0.1
1,677,663	-		PFLU_RS07555	0.32	-1.8
1,677,663	-		PFLU_RS07555	0.32	+4.6
1,677,696	-		PFLU_RS07555	0.36	-0.4
1,677,702	+		PFLU_RS07555	0.37	-1.7
1,677,702	+		PFLU_RS07555	0.37	-0.0
1,677,702	+		PFLU_RS07555	0.37	+2.6
1,677,702	+		PFLU_RS07555	0.37	-0.3
1,677,702	+		PFLU_RS07555	0.37	+3.6
1,677,702	+		PFLU_RS07555	0.37	-1.9
1,677,702	+		PFLU_RS07555	0.37	-2.0
1,677,702	+		PFLU_RS07555	0.37	+1.5
1,677,702	+		PFLU_RS07555	0.37	+0.4
1,677,702	+		PFLU_RS07555	0.37	+1.8
1,677,702	+		PFLU_RS07555	0.37	-0.9
1,677,703	-		PFLU_RS07555	0.37	-2.0
1,677,703	-		PFLU_RS07555	0.37	-0.2
1,677,703	-		PFLU_RS07555	0.37	+0.3
1,677,703	-		PFLU_RS07555	0.37	-0.4
1,677,703	-		PFLU_RS07555	0.37	-0.7
1,677,718	+		PFLU_RS07555	0.39	-0.2
1,677,718	+		PFLU_RS07555	0.39	-0.6
1,677,719	-		PFLU_RS07555	0.39	-1.1
1,677,719	-		PFLU_RS07555	0.39	-0.1
1,677,749	+		PFLU_RS07555	0.43	+0.3
1,677,749	+		PFLU_RS07555	0.43	-0.6
1,677,749	+		PFLU_RS07555	0.43	-0.7
1,677,749	+		PFLU_RS07555	0.43	+3.7
1,677,749	+		PFLU_RS07555	0.43	-1.5
1,677,749	+		PFLU_RS07555	0.43	-1.1
1,677,749	+		PFLU_RS07555	0.43	-0.9
1,677,749	+		PFLU_RS07555	0.43	+2.7
1,677,749	+		PFLU_RS07555	0.43	-1.3
1,677,750	-		PFLU_RS07555	0.43	+0.3
1,677,750	-		PFLU_RS07555	0.43	-0.9
1,677,750	-		PFLU_RS07555	0.43	+0.5
1,677,750	-		PFLU_RS07555	0.43	-1.3
1,677,750	-		PFLU_RS07555	0.43	-0.1
1,677,750	-		PFLU_RS07555	0.43	+0.2
1,677,750	-		PFLU_RS07555	0.43	-1.8
1,677,750	-		PFLU_RS07555	0.43	+0.4
1,677,773	+		PFLU_RS07555	0.47	+0.7
1,677,773	+		PFLU_RS07555	0.47	-1.6
1,677,773	+		PFLU_RS07555	0.47	-0.1
1,677,773	+		PFLU_RS07555	0.47	+0.8
1,677,773	+		PFLU_RS07555	0.47	-0.1
1,677,773	+		PFLU_RS07555	0.47	-1.3
1,677,773	+		PFLU_RS07555	0.47	+0.9
1,677,773	+		PFLU_RS07555	0.47	-0.9
1,677,773	+		PFLU_RS07555	0.47	-0.2
1,677,773	+		PFLU_RS07555	0.47	+2.2
1,677,773	+		PFLU_RS07555	0.47	-0.4
1,677,774	-		PFLU_RS07555	0.47	+1.8
1,677,774	-		PFLU_RS07555	0.47	+0.7
1,677,774	-		PFLU_RS07555	0.47	+0.3
1,677,774	-		PFLU_RS07555	0.47	+0.9
1,677,774	-		PFLU_RS07555	0.47	-1.1
1,677,774	-		PFLU_RS07555	0.47	+0.3
1,677,774	-		PFLU_RS07555	0.47	+2.2
1,677,833	+		PFLU_RS07555	0.55	-0.7
1,677,903	-		PFLU_RS07555	0.64	+1.8
1,677,903	-		PFLU_RS07555	0.64	-0.8
1,677,903	-		PFLU_RS07555	0.64	+0.5
1,677,909	+		PFLU_RS07555	0.65	-0.7
1,677,909	+		PFLU_RS07555	0.65	-1.7
1,677,909	+		PFLU_RS07555	0.65	-0.4
1,677,910	-		PFLU_RS07555	0.65	+0.3
1,677,945	-		PFLU_RS07555	0.70	-0.9
1,677,945	-		PFLU_RS07555	0.70	-0.3
1,677,978	+		PFLU_RS07555	0.74	-1.4
1,677,978	+		PFLU_RS07555	0.74	-1.3
1,677,979	-		PFLU_RS07555	0.74	+1.2
1,678,090	+		PFLU_RS07555	0.89	-1.7
1,678,090	+		PFLU_RS07555	0.89	+2.2
1,678,090	+		PFLU_RS07555	0.89	+1.5
1,678,090	+		PFLU_RS07555	0.89	-1.9
1,678,090	+		PFLU_RS07555	0.89	-2.1
1,678,090	+		PFLU_RS07555	0.89	+1.3
1,678,091	-		PFLU_RS07555	0.89	+0.9
1,678,091	-		PFLU_RS07555	0.89	+2.3
1,678,091	-		PFLU_RS07555	0.89	-2.6
1,678,091	-		PFLU_RS07555	0.89	-2.9
1,678,091	-		PFLU_RS07555	0.89	-0.7
1,678,101	+				-0.4
1,678,101	+				+0.9
1,678,101	+				-1.2
1,678,101	+				-0.1
1,678,101	+				-0.4
1,678,101	+				-1.3
1,678,102	-				+1.1
1,678,102	-				+0.3