Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14200

Experiment: 2-Deoxy-D-Ribose 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxy-D-Ribose 10 mM (C)
3,175,239	-		PFLU_RS14190	0.55	-0.1
3,175,248	+		PFLU_RS14190	0.56	-1.2
3,175,249	-		PFLU_RS14190	0.56	-0.8
3,175,249	-		PFLU_RS14190	0.56	-0.2
3,175,284	+		PFLU_RS14190	0.60	+0.8
3,175,284	+		PFLU_RS14190	0.60	-0.2
3,175,284	+		PFLU_RS14190	0.60	+0.3
3,175,284	+		PFLU_RS14190	0.60	-0.2
3,175,285	-		PFLU_RS14190	0.60	+0.3
3,175,325	+		PFLU_RS14190	0.65	-1.0
3,175,325	+		PFLU_RS14190	0.65	-0.8
3,175,401	+		PFLU_RS14190	0.74	-0.2
3,175,401	+		PFLU_RS14190	0.74	+0.6
3,175,401	+		PFLU_RS14190	0.74	-0.5
3,175,402	-		PFLU_RS14190	0.74	+0.3
3,175,402	-		PFLU_RS14190	0.74	+0.4
3,175,402	-		PFLU_RS14190	0.74	-0.2
3,175,456	+		PFLU_RS14190	0.81	-1.5
3,175,483	-		PFLU_RS14190	0.84	-0.7
3,175,568	-				+0.3
3,175,615	+				+1.7
3,175,615	+				+1.8
3,175,615	+				-1.7
3,175,615	+				+0.3
3,175,615	+				-1.0
3,175,615	+				+0.8
3,175,615	+				+0.3
3,175,615	+				-1.3
3,175,615	+				+0.3
3,175,616	-				-0.1
3,175,616	-				+1.0
3,175,616	-				-1.0
3,175,616	-				-0.5
3,175,616	-				-1.3
3,175,616	-				+0.5
3,175,616	-				+1.3
3,175,616	-				-0.8
3,175,629	+				+0.5
3,175,629	+				+1.6
3,175,629	+				-0.3
3,175,629	+				+1.2
3,175,629	+				+0.9
3,175,629	+				+1.3
3,175,629	+				-1.4
3,175,629	+				+0.9
3,175,630	-				-0.4
3,175,630	-				-0.2
3,175,633	+				+1.9
3,175,633	+				-2.0
3,175,633	+				-1.4
3,175,633	+				-0.2
3,175,633	+				-1.9
3,175,633	+				+1.9
3,175,633	+				+0.3
3,175,633	+				-0.1
3,175,634	-				-0.7
3,175,634	-				-0.2
3,175,634	-				+0.0
3,175,665	-				-0.5
3,175,705	+				+0.4
3,175,706	-				-1.1
3,175,706	-				+0.0
3,175,706	-				+0.2
3,175,722	+				+0.0
3,175,722	+				+0.9
3,175,723	-				+0.1
3,175,723	-				+1.2
3,175,723	-				-1.4
3,175,723	-				+1.3
3,175,726	+				-1.9
3,175,726	+				-0.4
3,175,726	+				-0.8
3,175,727	-				-0.5
3,175,727	-				+1.5
3,175,727	-				+1.1
3,175,747	-				+1.3
3,175,747	-				+2.3
3,175,752	+				+1.3
3,175,753	-				-0.7
3,175,774	-				+1.3
3,175,774	-				-1.7
3,175,805	-				+0.3
3,175,810	+				-0.4
3,175,927	+		PFLU_RS14195	0.41	-0.1
3,175,927	+		PFLU_RS14195	0.41	+0.0
3,175,928	-		PFLU_RS14195	0.41	+0.6
3,175,928	-		PFLU_RS14195	0.41	-0.7
3,175,928	-		PFLU_RS14195	0.41	-0.7
3,176,087	+				-0.8
3,176,087	+				-0.2
3,176,087	+				-0.5
3,176,087	+				-0.7
3,176,087	+				+0.9
3,176,087	+				+0.8
3,176,087	+				+1.6
3,176,087	+				-0.7
3,176,087	+				-1.6
3,176,087	+				-1.1
3,176,087	+				+0.5
3,176,087	+				+0.8
3,176,087	+				+0.0
3,176,087	+				-1.7
3,176,087	+				+0.0
3,176,087	+				-0.1
3,176,087	+				-0.7
3,176,087	+				+0.8
3,176,087	+				+1.3
3,176,087	+				-0.4
3,176,087	+				+0.8
3,176,087	+				-0.7
3,176,088	-				+0.0
3,176,088	-				+0.4
3,176,088	-				-0.1
3,176,088	-				-1.7
3,176,088	-				-1.8
3,176,088	-				-1.5
3,176,088	-				-1.4
3,176,088	-				+0.1
3,176,088	-				-0.7
3,176,088	-				-1.0
3,176,088	-				+0.8
3,176,125	+				+0.9
3,176,125	+				+0.0
3,176,125	+				-0.9
3,176,125	+				-0.4
3,176,125	+				+0.1
3,176,126	-				+0.2
3,176,126	-				-0.2
3,176,126	-				+0.3
3,176,126	-				+0.3
3,176,126	-				+0.6
3,176,126	-				-0.5
3,176,126	-				-2.3
3,176,134	-				-0.5
3,176,148	+				-0.2
3,176,148	+				+0.8
3,176,149	-				-1.5
3,176,149	-				+0.0
3,176,391	+		PFLU_RS14200	0.23	+0.8
3,176,391	+		PFLU_RS14200	0.23	-1.7
3,176,391	+		PFLU_RS14200	0.23	+0.8
3,176,391	+		PFLU_RS14200	0.23	-1.6
3,176,391	+		PFLU_RS14200	0.23	-0.2
3,176,391	+		PFLU_RS14200	0.23	+0.5
3,176,391	+		PFLU_RS14200	0.23	-0.2
3,176,392	-		PFLU_RS14200	0.23	+0.3
3,176,392	-		PFLU_RS14200	0.23	+0.5
3,176,392	-		PFLU_RS14200	0.23	-0.5
3,176,392	-		PFLU_RS14200	0.23	-1.0
3,176,462	+		PFLU_RS14200	0.29	-1.2
3,176,462	+		PFLU_RS14200	0.29	-0.2
3,176,462	+		PFLU_RS14200	0.29	-0.5
3,176,462	+		PFLU_RS14200	0.29	-0.5
3,176,462	+		PFLU_RS14200	0.29	-0.2
3,176,463	-		PFLU_RS14200	0.29	+0.3
3,176,463	-		PFLU_RS14200	0.29	+1.8
3,176,463	-		PFLU_RS14200	0.29	-1.1
3,176,463	-		PFLU_RS14200	0.29	-1.4
3,176,639	+		PFLU_RS14200	0.44	-1.1
3,176,640	-		PFLU_RS14200	0.44	+1.1
3,176,640	-		PFLU_RS14200	0.44	-0.5
3,176,723	+		PFLU_RS14200	0.52	-0.2
3,176,723	+		PFLU_RS14200	0.52	-1.1
3,176,724	-		PFLU_RS14200	0.52	-1.7
3,176,912	+		PFLU_RS14200	0.68	-1.0
3,176,912	+		PFLU_RS14200	0.68	-0.1
3,176,912	+		PFLU_RS14200	0.68	-0.4
3,176,912	+		PFLU_RS14200	0.68	+0.8
3,176,912	+		PFLU_RS14200	0.68	-1.6
3,176,912	+		PFLU_RS14200	0.68	-0.7
3,176,912	+		PFLU_RS14200	0.68	-1.5
3,176,913	-		PFLU_RS14200	0.68	+0.5
3,176,913	-		PFLU_RS14200	0.68	+0.8
3,176,913	-		PFLU_RS14200	0.68	+1.3
3,176,913	-		PFLU_RS14200	0.68	+1.9
3,176,913	-		PFLU_RS14200	0.68	+0.3
3,176,913	-		PFLU_RS14200	0.68	-2.0
3,176,913	-		PFLU_RS14200	0.68	+0.3
3,176,945	+		PFLU_RS14200	0.71	-0.9
3,176,945	+		PFLU_RS14200	0.71	+0.0
3,176,946	-		PFLU_RS14200	0.71	+0.3
3,176,946	-		PFLU_RS14200	0.71	-1.4
3,177,031	+		PFLU_RS14200	0.78	-0.1
3,177,040	+		PFLU_RS14200	0.79	-1.0
3,177,050	+		PFLU_RS14200	0.80	+2.3
3,177,050	+		PFLU_RS14200	0.80	+1.2
3,177,051	-		PFLU_RS14200	0.80	-1.1
3,177,051	-		PFLU_RS14200	0.80	+0.3
3,177,224	+				-1.5
3,177,224	+				+0.5
3,177,224	+				+0.5
3,177,224	+				+0.0
3,177,224	+				+0.2
3,177,224	+				+0.0
3,177,224	+				-0.5
3,177,224	+				-0.1
3,177,224	+				+1.8
3,177,224	+				-1.7
3,177,224	+				+0.0
3,177,224	+				-2.0
3,177,225	-				+1.6
3,177,225	-				+1.3
3,177,225	-				+1.8
3,177,225	-				+0.5
3,177,225	-				+2.3
3,177,225	-				+1.0
3,177,225	-				-0.1
3,177,225	-				+1.0
3,177,225	-				+0.3
3,177,225	-				+0.8
3,177,225	-				+0.8
3,177,258	-				+0.8
3,177,353	+				+1.6
3,177,353	+				-1.6
3,177,353	+				+0.0
3,177,354	-				-0.8
3,177,509	+		PFLU_RS14205	0.33	+2.8
3,177,509	+		PFLU_RS14205	0.33	+0.0
3,177,509	+		PFLU_RS14205	0.33	-1.7
3,177,510	-		PFLU_RS14205	0.33	+0.8
3,177,548	+		PFLU_RS14205	0.41	+1.2
3,177,548	+		PFLU_RS14205	0.41	-1.2
3,177,548	+		PFLU_RS14205	0.41	-0.8
3,177,548	+		PFLU_RS14205	0.41	+1.1
3,177,548	+		PFLU_RS14205	0.41	+1.8
3,177,549	-		PFLU_RS14205	0.41	-0.7
3,177,549	-		PFLU_RS14205	0.41	+0.5
3,177,554	+		PFLU_RS14205	0.42	-2.0
3,177,555	-		PFLU_RS14205	0.42	+0.3
3,177,665	+		PFLU_RS14205	0.65	+1.3
3,177,665	+		PFLU_RS14205	0.65	+0.0
3,177,707	+		PFLU_RS14205	0.74	+1.3
3,177,707	+		PFLU_RS14205	0.74	+1.3
3,177,708	-		PFLU_RS14205	0.74	+1.0
3,177,708	-		PFLU_RS14205	0.74	+0.2
3,177,708	-		PFLU_RS14205	0.74	+0.3
3,177,708	-		PFLU_RS14205	0.74	-0.5
3,177,852	+				+0.8
3,177,852	+				-1.0
3,177,853	-				-1.7
3,177,853	-				-0.5
3,178,052	-		PFLU_RS14210	0.29	-2.6
3,178,134	-		PFLU_RS14210	0.44	+1.3