Experiment: 2-Deoxy-D-Ribose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS01160 and PFLU_RS01165 are separated by 116 nucleotides PFLU_RS01165 and PFLU_RS01170 are separated by 40 nucleotides PFLU_RS01170 and PFLU_RS01175 overlap by 11 nucleotides
PFLU_RS01160: PFLU_RS01160 - glycoside hydrolase, at 256,515 to 258,692
_RS01160
PFLU_RS01165: PFLU_RS01165 - class I SAM-dependent methyltransferase, at 258,809 to 259,435
_RS01165
PFLU_RS01170: PFLU_RS01170 - ABC transporter permease, at 259,476 to 260,120
_RS01170
PFLU_RS01175: PFLU_RS01175 - ATP-binding cassette domain-containing protein, at 260,110 to 261,225
_RS01175
Position (kb) 259
260
261 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 258.599 kb on + strand at 258.599 kb on + strand at 258.627 kb on + strand at 258.627 kb on + strand at 258.679 kb on - strand at 258.679 kb on - strand at 258.690 kb on + strand at 258.690 kb on + strand at 258.690 kb on + strand at 258.690 kb on + strand at 258.690 kb on + strand at 258.691 kb on - strand at 258.691 kb on - strand at 258.691 kb on - strand at 258.691 kb on - strand at 258.691 kb on - strand at 258.736 kb on + strand at 258.736 kb on + strand at 258.736 kb on + strand at 258.736 kb on + strand at 258.736 kb on + strand at 258.736 kb on + strand at 258.736 kb on + strand at 258.736 kb on + strand at 258.736 kb on + strand at 258.736 kb on + strand at 258.736 kb on + strand at 258.737 kb on - strand at 258.737 kb on - strand at 258.737 kb on - strand at 258.737 kb on - strand at 258.737 kb on - strand at 258.737 kb on - strand at 258.737 kb on - strand at 258.737 kb on - strand at 258.737 kb on - strand at 258.746 kb on - strand at 258.746 kb on - strand at 258.746 kb on - strand at 258.746 kb on - strand at 258.746 kb on - strand at 258.746 kb on - strand at 258.746 kb on - strand at 258.746 kb on - strand at 258.746 kb on - strand at 258.746 kb on - strand at 258.811 kb on - strand at 258.873 kb on + strand, within PFLU_RS01165 at 258.874 kb on - strand, within PFLU_RS01165 at 258.876 kb on + strand, within PFLU_RS01165 at 258.876 kb on + strand, within PFLU_RS01165 at 258.876 kb on + strand, within PFLU_RS01165 at 258.876 kb on + strand, within PFLU_RS01165 at 258.876 kb on + strand, within PFLU_RS01165 at 258.876 kb on + strand, within PFLU_RS01165 at 258.876 kb on + strand, within PFLU_RS01165 at 258.876 kb on + strand, within PFLU_RS01165 at 258.876 kb on + strand, within PFLU_RS01165 at 258.877 kb on - strand, within PFLU_RS01165 at 258.877 kb on - strand, within PFLU_RS01165 at 258.877 kb on - strand, within PFLU_RS01165 at 258.877 kb on - strand, within PFLU_RS01165 at 258.877 kb on - strand, within PFLU_RS01165 at 258.877 kb on - strand, within PFLU_RS01165 at 258.877 kb on - strand, within PFLU_RS01165 at 258.877 kb on - strand, within PFLU_RS01165 at 258.877 kb on - strand, within PFLU_RS01165 at 258.877 kb on - strand, within PFLU_RS01165 at 258.877 kb on - strand, within PFLU_RS01165 at 258.877 kb on - strand, within PFLU_RS01165 at 258.877 kb on - strand, within PFLU_RS01165 at 258.939 kb on + strand, within PFLU_RS01165 at 258.940 kb on - strand, within PFLU_RS01165 at 258.940 kb on - strand, within PFLU_RS01165 at 259.070 kb on - strand, within PFLU_RS01165 at 259.076 kb on + strand, within PFLU_RS01165 at 259.076 kb on + strand, within PFLU_RS01165 at 259.076 kb on + strand, within PFLU_RS01165 at 259.076 kb on + strand, within PFLU_RS01165 at 259.076 kb on + strand, within PFLU_RS01165 at 259.076 kb on + strand, within PFLU_RS01165 at 259.077 kb on - strand, within PFLU_RS01165 at 259.077 kb on - strand, within PFLU_RS01165 at 259.077 kb on - strand, within PFLU_RS01165 at 259.077 kb on - strand, within PFLU_RS01165 at 259.077 kb on - strand, within PFLU_RS01165 at 259.077 kb on - strand, within PFLU_RS01165 at 259.077 kb on - strand, within PFLU_RS01165 at 259.077 kb on - strand, within PFLU_RS01165 at 259.077 kb on - strand, within PFLU_RS01165 at 259.077 kb on - strand, within PFLU_RS01165 at 259.077 kb on - strand, within PFLU_RS01165 at 259.077 kb on - strand, within PFLU_RS01165 at 259.209 kb on - strand, within PFLU_RS01165 at 259.209 kb on - strand, within PFLU_RS01165 at 259.300 kb on + strand, within PFLU_RS01165 at 259.300 kb on + strand, within PFLU_RS01165 at 259.300 kb on + strand, within PFLU_RS01165 at 259.300 kb on + strand, within PFLU_RS01165 at 259.380 kb on + strand at 259.380 kb on + strand at 259.380 kb on + strand at 259.380 kb on + strand at 259.381 kb on - strand at 259.381 kb on - strand at 259.381 kb on - strand at 259.381 kb on - strand at 259.381 kb on - strand at 259.426 kb on + strand at 259.427 kb on - strand at 259.427 kb on - strand at 259.470 kb on + strand at 259.470 kb on + strand at 259.471 kb on - strand at 259.471 kb on - strand at 259.471 kb on - strand at 259.472 kb on + strand at 259.472 kb on + strand at 259.472 kb on + strand at 259.472 kb on + strand at 259.472 kb on + strand at 259.472 kb on + strand at 259.472 kb on + strand at 259.473 kb on - strand at 259.473 kb on - strand at 259.574 kb on + strand, within PFLU_RS01170 at 259.588 kb on + strand, within PFLU_RS01170 at 259.600 kb on + strand, within PFLU_RS01170 at 259.863 kb on + strand, within PFLU_RS01170 at 259.870 kb on + strand, within PFLU_RS01170 at 259.870 kb on + strand, within PFLU_RS01170 at 259.870 kb on + strand, within PFLU_RS01170 at 259.871 kb on - strand, within PFLU_RS01170 at 259.871 kb on - strand, within PFLU_RS01170 at 259.871 kb on - strand, within PFLU_RS01170 at 259.871 kb on - strand, within PFLU_RS01170 at 259.874 kb on + strand, within PFLU_RS01170 at 259.874 kb on + strand, within PFLU_RS01170 at 259.874 kb on + strand, within PFLU_RS01170 at 259.874 kb on + strand, within PFLU_RS01170 at 259.874 kb on + strand, within PFLU_RS01170 at 259.875 kb on - strand, within PFLU_RS01170 at 259.875 kb on - strand, within PFLU_RS01170 at 259.875 kb on - strand, within PFLU_RS01170 at 259.875 kb on - strand, within PFLU_RS01170 at 259.875 kb on - strand, within PFLU_RS01170 at 259.875 kb on - strand, within PFLU_RS01170 at 259.875 kb on - strand, within PFLU_RS01170 at 259.991 kb on - strand, within PFLU_RS01170 at 259.991 kb on - strand, within PFLU_RS01170 at 259.991 kb on - strand, within PFLU_RS01170 at 259.991 kb on - strand, within PFLU_RS01170 at 259.991 kb on - strand, within PFLU_RS01170 at 260.103 kb on + strand at 260.104 kb on - strand at 260.104 kb on - strand at 260.120 kb on + strand at 260.120 kb on + strand at 260.120 kb on + strand at 260.120 kb on + strand at 260.121 kb on - strand at 260.121 kb on - strand at 260.121 kb on - strand at 260.121 kb on - strand at 260.121 kb on - strand at 260.121 kb on - strand at 260.121 kb on - strand at 260.121 kb on - strand at 260.338 kb on + strand, within PFLU_RS01175 at 260.338 kb on + strand, within PFLU_RS01175 at 260.338 kb on + strand, within PFLU_RS01175 at 260.339 kb on - strand, within PFLU_RS01175 at 260.339 kb on - strand, within PFLU_RS01175 at 260.339 kb on - strand, within PFLU_RS01175 at 260.377 kb on + strand, within PFLU_RS01175 at 260.378 kb on - strand, within PFLU_RS01175 at 260.378 kb on - strand, within PFLU_RS01175 at 260.973 kb on + strand, within PFLU_RS01175 at 260.973 kb on + strand, within PFLU_RS01175 at 260.973 kb on + strand, within PFLU_RS01175 at 260.973 kb on + strand, within PFLU_RS01175 at 260.973 kb on + strand, within PFLU_RS01175 at 260.973 kb on + strand, within PFLU_RS01175 at 260.973 kb on + strand, within PFLU_RS01175 at 260.974 kb on - strand, within PFLU_RS01175 at 260.974 kb on - strand, within PFLU_RS01175 at 260.974 kb on - strand, within PFLU_RS01175 at 261.104 kb on + strand, within PFLU_RS01175 at 261.104 kb on + strand, within PFLU_RS01175 at 261.104 kb on + strand, within PFLU_RS01175 at 261.105 kb on - strand, within PFLU_RS01175 at 261.105 kb on - strand, within PFLU_RS01175 at 261.105 kb on - strand, within PFLU_RS01175 at 261.105 kb on - strand, within PFLU_RS01175 at 261.105 kb on - strand, within PFLU_RS01175 at 261.105 kb on - strand, within PFLU_RS01175 at 261.105 kb on - strand, within PFLU_RS01175
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose 10 mM (C) remove 258,599 + -2.1 258,599 + -2.2 258,627 + +0.2 258,627 + -1.1 258,679 - -0.1 258,679 - +0.3 258,690 + +0.9 258,690 + -0.5 258,690 + +1.7 258,690 + -0.6 258,690 + +0.9 258,691 - +0.6 258,691 - -0.4 258,691 - +0.6 258,691 - +0.1 258,691 - -1.0 258,736 + +1.3 258,736 + -0.3 258,736 + -2.4 258,736 + +0.7 258,736 + +0.8 258,736 + +1.4 258,736 + +0.1 258,736 + +1.3 258,736 + -0.7 258,736 + -0.2 258,736 + -2.0 258,737 - -0.8 258,737 - -1.3 258,737 - -2.2 258,737 - -0.4 258,737 - +1.4 258,737 - -0.8 258,737 - -1.7 258,737 - -0.0 258,737 - -0.9 258,746 - -0.4 258,746 - +0.3 258,746 - +1.4 258,746 - -1.0 258,746 - +1.6 258,746 - +1.3 258,746 - +0.3 258,746 - +1.9 258,746 - +1.3 258,746 - +1.5 258,811 - -0.5 258,873 + PFLU_RS01165 0.10 +1.3 258,874 - PFLU_RS01165 0.10 +1.9 258,876 + PFLU_RS01165 0.11 +0.1 258,876 + PFLU_RS01165 0.11 +1.6 258,876 + PFLU_RS01165 0.11 +1.1 258,876 + PFLU_RS01165 0.11 +0.9 258,876 + PFLU_RS01165 0.11 +0.4 258,876 + PFLU_RS01165 0.11 +0.9 258,876 + PFLU_RS01165 0.11 +0.2 258,876 + PFLU_RS01165 0.11 -0.0 258,876 + PFLU_RS01165 0.11 -1.6 258,877 - PFLU_RS01165 0.11 +0.8 258,877 - PFLU_RS01165 0.11 -0.0 258,877 - PFLU_RS01165 0.11 -2.0 258,877 - PFLU_RS01165 0.11 +1.7 258,877 - PFLU_RS01165 0.11 -1.0 258,877 - PFLU_RS01165 0.11 +0.2 258,877 - PFLU_RS01165 0.11 -1.6 258,877 - PFLU_RS01165 0.11 +0.6 258,877 - PFLU_RS01165 0.11 -0.4 258,877 - PFLU_RS01165 0.11 -0.9 258,877 - PFLU_RS01165 0.11 +0.3 258,877 - PFLU_RS01165 0.11 +0.9 258,877 - PFLU_RS01165 0.11 -0.1 258,939 + PFLU_RS01165 0.21 +0.6 258,940 - PFLU_RS01165 0.21 +1.0 258,940 - PFLU_RS01165 0.21 -1.1 259,070 - PFLU_RS01165 0.42 +0.1 259,076 + PFLU_RS01165 0.43 -0.3 259,076 + PFLU_RS01165 0.43 -1.5 259,076 + PFLU_RS01165 0.43 -0.4 259,076 + PFLU_RS01165 0.43 +0.3 259,076 + PFLU_RS01165 0.43 -0.1 259,076 + PFLU_RS01165 0.43 -0.9 259,077 - PFLU_RS01165 0.43 +0.9 259,077 - PFLU_RS01165 0.43 -2.3 259,077 - PFLU_RS01165 0.43 +0.9 259,077 - PFLU_RS01165 0.43 +0.6 259,077 - PFLU_RS01165 0.43 +0.4 259,077 - PFLU_RS01165 0.43 +1.3 259,077 - PFLU_RS01165 0.43 +1.0 259,077 - PFLU_RS01165 0.43 +0.6 259,077 - PFLU_RS01165 0.43 -0.9 259,077 - PFLU_RS01165 0.43 +0.9 259,077 - PFLU_RS01165 0.43 -0.5 259,077 - PFLU_RS01165 0.43 +0.6 259,209 - PFLU_RS01165 0.64 +1.9 259,209 - PFLU_RS01165 0.64 +0.9 259,300 + PFLU_RS01165 0.78 -0.8 259,300 + PFLU_RS01165 0.78 -0.1 259,300 + PFLU_RS01165 0.78 +1.6 259,300 + PFLU_RS01165 0.78 -1.1 259,380 + -0.4 259,380 + -0.3 259,380 + +0.6 259,380 + -1.0 259,381 - -0.1 259,381 - +0.1 259,381 - +0.5 259,381 - +1.5 259,381 - -0.6 259,426 + -0.6 259,427 - -0.7 259,427 - +1.1 259,470 + -0.1 259,470 + -1.8 259,471 - -1.3 259,471 - +0.6 259,471 - -0.6 259,472 + -1.1 259,472 + +0.7 259,472 + +0.6 259,472 + -1.2 259,472 + +1.5 259,472 + +2.9 259,472 + -2.0 259,473 - -0.2 259,473 - -2.0 259,574 + PFLU_RS01170 0.15 -0.7 259,588 + PFLU_RS01170 0.17 -0.9 259,600 + PFLU_RS01170 0.19 -0.6 259,863 + PFLU_RS01170 0.60 +2.0 259,870 + PFLU_RS01170 0.61 +1.0 259,870 + PFLU_RS01170 0.61 -1.2 259,870 + PFLU_RS01170 0.61 +0.2 259,871 - PFLU_RS01170 0.61 -1.3 259,871 - PFLU_RS01170 0.61 +2.9 259,871 - PFLU_RS01170 0.61 +1.7 259,871 - PFLU_RS01170 0.61 -1.4 259,874 + PFLU_RS01170 0.62 +1.8 259,874 + PFLU_RS01170 0.62 +1.9 259,874 + PFLU_RS01170 0.62 -1.1 259,874 + PFLU_RS01170 0.62 +2.5 259,874 + PFLU_RS01170 0.62 +1.3 259,875 - PFLU_RS01170 0.62 -1.7 259,875 - PFLU_RS01170 0.62 -1.0 259,875 - PFLU_RS01170 0.62 +0.2 259,875 - PFLU_RS01170 0.62 +0.3 259,875 - PFLU_RS01170 0.62 -0.4 259,875 - PFLU_RS01170 0.62 -0.8 259,875 - PFLU_RS01170 0.62 +0.3 259,991 - PFLU_RS01170 0.80 -1.9 259,991 - PFLU_RS01170 0.80 -1.8 259,991 - PFLU_RS01170 0.80 +0.6 259,991 - PFLU_RS01170 0.80 +1.1 259,991 - PFLU_RS01170 0.80 -2.0 260,103 + -0.5 260,104 - -1.1 260,104 - +0.2 260,120 + -0.9 260,120 + +1.0 260,120 + +0.1 260,120 + -0.2 260,121 - +0.6 260,121 - +0.6 260,121 - +0.6 260,121 - -1.3 260,121 - -0.3 260,121 - +0.9 260,121 - -0.1 260,121 - -1.1 260,338 + PFLU_RS01175 0.20 -2.1 260,338 + PFLU_RS01175 0.20 -0.6 260,338 + PFLU_RS01175 0.20 +0.1 260,339 - PFLU_RS01175 0.21 -0.7 260,339 - PFLU_RS01175 0.21 +2.3 260,339 - PFLU_RS01175 0.21 -0.7 260,377 + PFLU_RS01175 0.24 +0.1 260,378 - PFLU_RS01175 0.24 -0.1 260,378 - PFLU_RS01175 0.24 -2.3 260,973 + PFLU_RS01175 0.77 -0.2 260,973 + PFLU_RS01175 0.77 +0.3 260,973 + PFLU_RS01175 0.77 -0.1 260,973 + PFLU_RS01175 0.77 -0.4 260,973 + PFLU_RS01175 0.77 -1.1 260,973 + PFLU_RS01175 0.77 -0.1 260,973 + PFLU_RS01175 0.77 -0.7 260,974 - PFLU_RS01175 0.77 -0.9 260,974 - PFLU_RS01175 0.77 -0.4 260,974 - PFLU_RS01175 0.77 +0.9 261,104 + PFLU_RS01175 0.89 +1.3 261,104 + PFLU_RS01175 0.89 -1.0 261,104 + PFLU_RS01175 0.89 +0.9 261,105 - PFLU_RS01175 0.89 -2.3 261,105 - PFLU_RS01175 0.89 -1.8 261,105 - PFLU_RS01175 0.89 -0.3 261,105 - PFLU_RS01175 0.89 -1.4 261,105 - PFLU_RS01175 0.89 +0.1 261,105 - PFLU_RS01175 0.89 +0.4 261,105 - PFLU_RS01175 0.89 -0.4
Or see this region's nucleotide sequence