Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS30515

Experiment: 2-Deoxy-D-Ribose 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxy-D-Ribose 10 mM (C)
1,824,141	+				+1.6
1,824,172	+		PFLU_RS08160	0.15	-0.2
1,824,332	-		PFLU_RS08160	0.40	-0.0
1,824,340	+		PFLU_RS08160	0.41	+2.6
1,824,340	+		PFLU_RS08160	0.41	+1.0
1,824,340	+		PFLU_RS08160	0.41	+2.9
1,824,340	+		PFLU_RS08160	0.41	+2.6
1,824,340	+		PFLU_RS08160	0.41	+1.6
1,824,340	+		PFLU_RS08160	0.41	+1.0
1,824,340	+		PFLU_RS08160	0.41	+2.6
1,824,340	+		PFLU_RS08160	0.41	+1.8
1,824,340	+		PFLU_RS08160	0.41	+2.6
1,824,340	+		PFLU_RS08160	0.41	+0.6
1,824,340	+		PFLU_RS08160	0.41	-0.0
1,824,340	+		PFLU_RS08160	0.41	+2.6
1,824,341	-		PFLU_RS08160	0.41	-0.4
1,824,341	-		PFLU_RS08160	0.41	-0.0
1,824,341	-		PFLU_RS08160	0.41	-0.6
1,824,341	-		PFLU_RS08160	0.41	-0.4
1,824,341	-		PFLU_RS08160	0.41	-0.0
1,824,341	-		PFLU_RS08160	0.41	+0.1
1,824,341	-		PFLU_RS08160	0.41	-0.2
1,824,341	-		PFLU_RS08160	0.41	-0.9
1,824,341	-		PFLU_RS08160	0.41	-0.9
1,824,341	-		PFLU_RS08160	0.41	+1.6
1,824,346	+		PFLU_RS08160	0.42	+2.6
1,824,346	+		PFLU_RS08160	0.42	+1.6
1,824,347	-		PFLU_RS08160	0.42	+1.0
1,824,347	-		PFLU_RS08160	0.42	+1.6
1,824,349	+		PFLU_RS08160	0.42	+2.6
1,824,349	+		PFLU_RS08160	0.42	+0.6
1,824,349	+		PFLU_RS08160	0.42	+2.6
1,824,349	+		PFLU_RS08160	0.42	+1.6
1,824,349	+		PFLU_RS08160	0.42	+2.6
1,824,349	+		PFLU_RS08160	0.42	+1.6
1,824,349	+		PFLU_RS08160	0.42	+1.2
1,824,349	+		PFLU_RS08160	0.42	+2.6
1,824,349	+		PFLU_RS08160	0.42	+1.6
1,824,350	-		PFLU_RS08160	0.42	+1.6
1,824,350	-		PFLU_RS08160	0.42	+2.6
1,824,350	-		PFLU_RS08160	0.42	-0.2
1,824,431	+		PFLU_RS08160	0.55	+2.6
1,824,432	-		PFLU_RS08160	0.55	+2.6
1,824,444	-		PFLU_RS08160	0.57	-0.6
1,824,444	-		PFLU_RS08160	0.57	+1.3
1,824,474	+		PFLU_RS08160	0.62	+1.0
1,824,474	+		PFLU_RS08160	0.62	+1.0
1,824,474	+		PFLU_RS08160	0.62	+3.6
1,824,504	+		PFLU_RS08160	0.66	+1.6
1,824,514	+		PFLU_RS08160	0.68	+0.6
1,824,514	+		PFLU_RS08160	0.68	+2.6
1,824,514	+		PFLU_RS08160	0.68	+1.0
1,824,515	-		PFLU_RS08160	0.68	-0.3
1,824,515	-		PFLU_RS08160	0.68	-0.1
1,824,541	+		PFLU_RS08160	0.72	+2.6
1,824,541	+		PFLU_RS08160	0.72	+1.0
1,824,550	+		PFLU_RS08160	0.73	+1.6
1,824,550	+		PFLU_RS08160	0.73	+1.0
1,824,551	-		PFLU_RS08160	0.73	+0.2
1,824,558	-		PFLU_RS08160	0.75	-0.1
1,824,558	-		PFLU_RS08160	0.75	-1.0
1,824,558	-		PFLU_RS08160	0.75	+0.2
1,824,558	-		PFLU_RS08160	0.75	+0.4
1,824,568	+		PFLU_RS08160	0.76	+1.6
1,824,569	-		PFLU_RS08160	0.76	-1.9
1,824,569	-		PFLU_RS08160	0.76	-0.6
1,824,582	+		PFLU_RS08160	0.78	+1.6
1,824,589	-		PFLU_RS08160	0.79	-0.2
1,824,589	-		PFLU_RS08160	0.79	+0.6
1,824,600	+		PFLU_RS08160	0.81	+1.0
1,824,699	+				-1.5
1,824,699	+				-0.2
1,824,699	+				-0.8
1,824,703	+				+0.9
1,824,703	+				+0.2
1,824,703	+				-0.2
1,824,703	+				-1.4
1,824,704	-				+1.8
1,824,704	-				-0.0
1,824,836	+		PFLU_RS08165	0.56	+2.0
1,824,836	+		PFLU_RS08165	0.56	-0.1
1,824,839	+		PFLU_RS08165	0.57	+1.0
1,824,839	+		PFLU_RS08165	0.57	+2.6
1,824,840	-		PFLU_RS08165	0.57	-0.4
1,824,840	-		PFLU_RS08165	0.57	+0.2
1,824,915	-				+2.0
1,824,925	+				-1.4
1,824,926	-				-0.6
1,824,926	-				+0.2
1,824,929	-				-0.1
1,825,045	+				-1.4
1,825,045	+				-1.5
1,825,046	-				+1.6
1,825,068	-				+0.2
1,825,068	-				-1.4
1,825,075	+				-0.8
1,825,084	+				+0.9
1,825,215	+		PFLU_RS30515	0.13	-0.2
1,825,322	+		PFLU_RS30515	0.23	+0.4
1,825,355	-		PFLU_RS30515	0.26	-0.4
1,825,355	-		PFLU_RS30515	0.26	-1.0
1,825,422	+		PFLU_RS30515	0.33	+1.0
1,825,422	+		PFLU_RS30515	0.33	-1.0
1,825,426	+		PFLU_RS30515	0.33	-1.5
1,825,429	-		PFLU_RS30515	0.33	+1.0
1,825,469	-		PFLU_RS30515	0.37	-0.9
1,825,607	+		PFLU_RS30515	0.51	-2.4
1,825,613	-		PFLU_RS30515	0.51	+1.0
1,825,781	+		PFLU_RS30515	0.67	-0.4
1,825,795	+		PFLU_RS30515	0.69	-0.8
1,825,796	-		PFLU_RS30515	0.69	-0.2
1,825,889	-		PFLU_RS30515	0.78	+1.2
1,825,915	+		PFLU_RS30515	0.80	-0.4
1,825,983	+		PFLU_RS30515	0.87	+0.6
1,825,983	+		PFLU_RS30515	0.87	-0.7
1,825,983	+		PFLU_RS30515	0.87	-0.2
1,825,984	-		PFLU_RS30515	0.87	-0.6
1,826,036	-				+1.0
1,826,062	-				-0.4
1,826,103	-				+1.8
1,826,110	+				-0.8
1,826,114	+				+0.2
1,826,156	+				-0.3
1,826,305	+		PFLU_RS30520	0.13	-0.9
1,826,308	+		PFLU_RS30520	0.13	+1.0
1,826,331	+		PFLU_RS30520	0.15	-1.0
1,826,401	+		PFLU_RS30520	0.22	-1.1
1,826,427	+		PFLU_RS30520	0.24	+2.6
1,826,450	+		PFLU_RS30520	0.26	-0.9
1,826,450	+		PFLU_RS30520	0.26	+0.6
1,826,451	-		PFLU_RS30520	0.26	-1.0
1,826,451	-		PFLU_RS30520	0.26	+1.0
1,826,544	-		PFLU_RS30520	0.35	+0.2
1,826,550	-		PFLU_RS30520	0.35	+0.6
1,826,607	+		PFLU_RS30520	0.41	-0.4
1,826,614	-		PFLU_RS30520	0.41	-0.4
1,826,629	+		PFLU_RS30520	0.43	-0.2
1,826,629	+		PFLU_RS30520	0.43	-1.0
1,826,630	-		PFLU_RS30520	0.43	-0.6
1,826,630	-		PFLU_RS30520	0.43	+1.6
1,826,635	-		PFLU_RS30520	0.43	+0.7
1,826,731	+		PFLU_RS30520	0.52	-0.6
1,826,844	-		PFLU_RS30520	0.62	-0.0
1,826,852	+		PFLU_RS30520	0.63	-0.2
1,826,904	+		PFLU_RS30520	0.68	+1.0
1,826,927	-		PFLU_RS30520	0.70	-0.4
1,826,953	+		PFLU_RS30520	0.72	-0.2
1,826,954	-		PFLU_RS30520	0.73	+0.4
1,826,954	-		PFLU_RS30520	0.73	-0.8
1,826,954	-		PFLU_RS30520	0.73	-0.6
1,826,957	+		PFLU_RS30520	0.73	-0.6
1,826,958	-		PFLU_RS30520	0.73	-0.1
1,826,958	-		PFLU_RS30520	0.73	+0.2
1,826,984	-		PFLU_RS30520	0.75	+0.1
1,827,088	+		PFLU_RS30520	0.85	-0.9
1,827,088	+		PFLU_RS30520	0.85	-0.0
1,827,088	+		PFLU_RS30520	0.85	+1.3
1,827,089	-		PFLU_RS30520	0.85	+0.6
1,827,089	-		PFLU_RS30520	0.85	-0.8