Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05080

Experiment: 2-Deoxy-D-Ribose 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxy-D-Ribose 10 mM (C)
1,133,148	+		PFLU_RS05075	0.35	+2.6
1,133,148	+		PFLU_RS05075	0.35	+1.0
1,133,148	+		PFLU_RS05075	0.35	+0.4
1,133,148	+		PFLU_RS05075	0.35	+1.6
1,133,148	+		PFLU_RS05075	0.35	-1.2
1,133,148	+		PFLU_RS05075	0.35	+0.8
1,133,148	+		PFLU_RS05075	0.35	+0.5
1,133,148	+		PFLU_RS05075	0.35	-0.2
1,133,148	+		PFLU_RS05075	0.35	+1.9
1,133,148	+		PFLU_RS05075	0.35	+0.3
1,133,149	-		PFLU_RS05075	0.35	+0.3
1,133,149	-		PFLU_RS05075	0.35	-0.1
1,133,149	-		PFLU_RS05075	0.35	+1.3
1,133,149	-		PFLU_RS05075	0.35	-0.6
1,133,149	-		PFLU_RS05075	0.35	-0.6
1,133,149	-		PFLU_RS05075	0.35	+0.1
1,133,149	-		PFLU_RS05075	0.35	-1.9
1,133,149	-		PFLU_RS05075	0.35	-1.7
1,133,151	+		PFLU_RS05075	0.35	-0.4
1,133,152	-		PFLU_RS05075	0.35	-0.5
1,133,283	+		PFLU_RS05075	0.44	-2.7
1,133,283	+		PFLU_RS05075	0.44	-1.1
1,133,283	+		PFLU_RS05075	0.44	+0.0
1,133,283	+		PFLU_RS05075	0.44	+1.0
1,133,283	+		PFLU_RS05075	0.44	+1.6
1,133,284	-		PFLU_RS05075	0.45	+1.5
1,133,284	-		PFLU_RS05075	0.45	-1.8
1,133,284	-		PFLU_RS05075	0.45	-1.8
1,133,328	+		PFLU_RS05075	0.48	-0.6
1,133,328	+		PFLU_RS05075	0.48	+1.3
1,133,328	+		PFLU_RS05075	0.48	-0.5
1,133,328	+		PFLU_RS05075	0.48	-0.1
1,133,329	-		PFLU_RS05075	0.48	+0.2
1,133,329	-		PFLU_RS05075	0.48	-2.6
1,133,329	-		PFLU_RS05075	0.48	-0.5
1,133,329	-		PFLU_RS05075	0.48	+0.9
1,133,329	-		PFLU_RS05075	0.48	+1.2
1,133,329	-		PFLU_RS05075	0.48	+2.0
1,133,329	-		PFLU_RS05075	0.48	+0.4
1,133,329	-		PFLU_RS05075	0.48	-0.7
1,133,482	+		PFLU_RS05075	0.58	-0.7
1,133,482	+		PFLU_RS05075	0.58	+0.8
1,133,482	+		PFLU_RS05075	0.58	+0.6
1,133,483	-		PFLU_RS05075	0.58	-0.4
1,133,507	+		PFLU_RS05075	0.60	+1.0
1,133,507	+		PFLU_RS05075	0.60	-0.3
1,133,507	+		PFLU_RS05075	0.60	-0.6
1,133,507	+		PFLU_RS05075	0.60	+1.3
1,133,507	+		PFLU_RS05075	0.60	-1.6
1,133,507	+		PFLU_RS05075	0.60	-1.2
1,133,507	+		PFLU_RS05075	0.60	+0.7
1,133,507	+		PFLU_RS05075	0.60	+0.6
1,133,507	+		PFLU_RS05075	0.60	+1.3
1,133,507	+		PFLU_RS05075	0.60	+1.6
1,133,507	+		PFLU_RS05075	0.60	+0.3
1,133,508	-		PFLU_RS05075	0.60	+1.2
1,133,508	-		PFLU_RS05075	0.60	-1.1
1,133,508	-		PFLU_RS05075	0.60	-0.6
1,133,508	-		PFLU_RS05075	0.60	+0.0
1,133,508	-		PFLU_RS05075	0.60	-0.1
1,133,508	-		PFLU_RS05075	0.60	-0.8
1,133,508	-		PFLU_RS05075	0.60	-0.5
1,133,508	-		PFLU_RS05075	0.60	+0.3
1,133,508	-		PFLU_RS05075	0.60	+1.6
1,133,652	-		PFLU_RS05075	0.70	+1.0
1,133,753	+		PFLU_RS05075	0.77	+0.9
1,133,754	-		PFLU_RS05075	0.77	+2.0
1,133,826	+		PFLU_RS05075	0.82	-0.4
1,133,826	+		PFLU_RS05075	0.82	+1.0
1,133,826	+		PFLU_RS05075	0.82	+0.9
1,133,826	+		PFLU_RS05075	0.82	-0.2
1,133,826	+		PFLU_RS05075	0.82	-1.5
1,133,827	-		PFLU_RS05075	0.82	+0.3
1,133,827	-		PFLU_RS05075	0.82	-0.0
1,133,827	-		PFLU_RS05075	0.82	+0.6
1,133,827	-		PFLU_RS05075	0.82	+2.2
1,133,827	-		PFLU_RS05075	0.82	-0.2
1,133,964	+				+1.0
1,133,964	+				+1.8
1,133,964	+				+1.4
1,133,965	-				-1.6
1,134,014	+				-0.2
1,134,014	+				-0.1
1,134,014	+				+1.0
1,134,014	+				+0.9
1,134,014	+				-1.5
1,134,014	+				-0.4
1,134,014	+				-0.6
1,134,014	+				-1.4
1,134,014	+				+1.6
1,134,014	+				+0.0
1,134,014	+				-0.2
1,134,015	-				-1.6
1,134,015	-				-0.6
1,134,015	-				-1.1
1,134,015	-				-1.0
1,134,015	-				+1.6
1,134,015	-				-0.4
1,134,015	-				+1.6
1,134,015	-				-1.3
1,134,015	-				+0.4
1,134,015	-				-2.8
1,134,015	-				+0.8
1,134,015	-				+2.0
1,134,015	-				+1.9
1,134,015	-				-0.4
1,134,015	-				-1.0
1,134,018	+				+0.0
1,134,018	+				-0.8
1,134,018	+				-0.6
1,134,018	+				-0.0
1,134,018	+				-2.1
1,134,018	+				+0.2
1,134,018	+				-1.8
1,134,018	+				-1.5
1,134,018	+				+0.0
1,134,018	+				-1.6
1,134,018	+				-0.6
1,134,018	+				+1.6
1,134,018	+				-0.5
1,134,018	+				-0.7
1,134,018	+				+1.2
1,134,018	+				+0.4
1,134,018	+				-1.7
1,134,018	+				+0.3
1,134,018	+				+0.0
1,134,018	+				-1.3
1,134,018	+				-1.9
1,134,018	+				+1.6
1,134,018	+				-2.6
1,134,018	+				+0.6
1,134,018	+				-0.3
1,134,018	+				-1.4
1,134,018	+				-0.8
1,134,018	+				-0.4
1,134,018	+				-2.0
1,134,018	+				+0.8
1,134,018	+				-0.6
1,134,018	+				-0.7
1,134,018	+				-1.2
1,134,018	+				-1.0
1,134,018	+				-1.0
1,134,018	+				+0.1
1,134,018	+				+0.6
1,134,018	+				-1.0
1,134,018	+				+0.6
1,134,018	+				+0.3
1,134,018	+				-0.7
1,134,018	+				+0.2
1,134,018	+				-2.7
1,134,018	+				-2.1
1,134,018	+				+0.6
1,134,018	+				-0.7
1,134,018	+				+0.3
1,134,018	+				+0.6
1,134,018	+				+2.2
1,134,018	+				-0.3
1,134,018	+				-1.1
1,134,018	+				-1.1
1,134,018	+				-1.3
1,134,018	+				-0.2
1,134,019	-				-0.5
1,134,019	-				-0.1
1,134,019	-				+1.4
1,134,019	-				+0.1
1,134,019	-				+0.0
1,134,019	-				+0.3
1,134,019	-				+0.4
1,134,019	-				+1.3
1,134,019	-				+0.3
1,134,019	-				-0.3
1,134,019	-				+0.0
1,134,019	-				-1.0
1,134,019	-				-0.5
1,134,019	-				-0.6
1,134,019	-				+1.0
1,134,019	-				-1.6
1,134,019	-				-0.6
1,134,019	-				-0.6
1,134,019	-				-1.4
1,134,019	-				+0.6
1,134,019	-				+1.6
1,134,019	-				+1.2
1,134,019	-				-1.3
1,134,019	-				-1.6
1,134,019	-				-0.2
1,134,019	-				-1.5
1,134,019	-				+1.6
1,134,019	-				-1.7
1,134,019	-				+0.6
1,134,019	-				-1.7
1,134,019	-				-1.4
1,134,019	-				-1.8
1,134,019	-				-0.4
1,134,019	-				-1.2
1,134,019	-				-0.7
1,134,019	-				-1.7
1,134,019	-				-1.3
1,134,019	-				+0.4
1,134,019	-				-1.2
1,134,019	-				+1.0
1,134,019	-				+1.0
1,134,019	-				+0.7
1,134,019	-				-0.2
1,134,019	-				-0.6
1,134,019	-				-0.5
1,134,019	-				-1.4
1,134,019	-				-0.7
1,134,019	-				+2.6
1,134,019	-				-1.3
1,134,019	-				-1.0
1,134,019	-				+0.0
1,134,019	-				+0.6
1,134,019	-				-2.1
1,134,019	-				+0.3
1,134,019	-				+0.6
1,134,019	-				-0.4
1,134,019	-				-1.9
1,134,090	+				-0.7
1,134,090	+				+0.9
1,134,090	+				+0.9
1,134,090	+				-0.2
1,134,090	+				+1.6
1,134,090	+				+0.4
1,134,091	-				-0.6
1,134,091	-				+0.8
1,134,091	-				+2.0
1,134,091	-				+0.2
1,134,091	-				+0.0
1,134,091	-				-0.1
1,134,091	-				-0.4
1,134,329	+		PFLU_RS05080	0.30	-2.8
1,134,391	+		PFLU_RS05080	0.38	-2.2
1,134,665	+		PFLU_RS05080	0.73	-0.4
1,134,665	+		PFLU_RS05080	0.73	+3.6
1,134,666	-		PFLU_RS05080	0.73	-1.2
1,134,666	-		PFLU_RS05080	0.73	-0.5
1,134,666	-		PFLU_RS05080	0.73	-1.1
1,134,666	-		PFLU_RS05080	0.73	+0.4
1,134,666	-		PFLU_RS05080	0.73	-0.6
1,134,910	+				+0.2
1,134,911	-				-0.0
1,134,911	-				-1.3
1,134,912	+				+0.0
1,134,912	+				-0.2
1,134,912	+				-1.0
1,134,912	+				-0.8
1,134,912	+				+0.4
1,134,912	+				-0.7
1,134,912	+				-1.3
1,134,912	+				-0.4
1,134,912	+				-0.4
1,134,912	+				+0.3
1,134,912	+				+1.6
1,134,913	-				+0.0
1,134,913	-				-0.8
1,134,913	-				-1.6
1,134,913	-				-0.3
1,134,913	-				-1.7
1,134,913	-				-0.7
1,134,913	-				+1.6
1,134,913	-				-0.2
1,134,927	+				+0.0
1,134,979	+				-0.6
1,135,006	+				-0.3
1,135,006	+				+1.2
1,135,006	+				+1.0
1,135,007	-				+0.6
1,135,007	-				+0.8
1,135,007	-				-0.6
1,135,007	-				+1.6
1,135,007	-				+0.4
1,135,007	-				-1.5
1,135,007	-				+2.6
1,135,007	-				-1.2
1,135,007	-				+0.6
1,135,093	+				+0.7
1,135,093	+				-0.5
1,135,094	-				-0.3
1,135,103	-				-0.8
1,135,103	-				+0.4
1,135,103	-				-0.5
1,135,204	-		PFLU_RS05085	0.16	+0.2
1,135,281	+		PFLU_RS05085	0.22	-0.7
1,135,282	-		PFLU_RS05085	0.22	+1.6
1,135,319	+		PFLU_RS05085	0.25	-1.2
1,135,319	+		PFLU_RS05085	0.25	-0.4
1,135,320	-		PFLU_RS05085	0.25	-0.2
1,135,320	-		PFLU_RS05085	0.25	+0.5
1,135,320	-		PFLU_RS05085	0.25	-0.2
1,135,320	-		PFLU_RS05085	0.25	-1.4
1,135,320	-		PFLU_RS05085	0.25	-1.0
1,135,320	-		PFLU_RS05085	0.25	-0.5
1,135,320	-		PFLU_RS05085	0.25	+0.0
1,135,332	+		PFLU_RS05085	0.26	-1.5
1,135,369	+		PFLU_RS05085	0.29	-0.1
1,135,369	+		PFLU_RS05085	0.29	-1.4
1,135,369	+		PFLU_RS05085	0.29	-1.1
1,135,369	+		PFLU_RS05085	0.29	-1.5
1,135,369	+		PFLU_RS05085	0.29	+0.4
1,135,369	+		PFLU_RS05085	0.29	+1.4
1,135,369	+		PFLU_RS05085	0.29	+0.2
1,135,369	+		PFLU_RS05085	0.29	+1.8
1,135,369	+		PFLU_RS05085	0.29	-1.1
1,135,369	+		PFLU_RS05085	0.29	-0.4
1,135,369	+		PFLU_RS05085	0.29	+0.2
1,135,369	+		PFLU_RS05085	0.29	+0.0
1,135,369	+		PFLU_RS05085	0.29	-0.8
1,135,369	+		PFLU_RS05085	0.29	-1.1
1,135,369	+		PFLU_RS05085	0.29	+0.6
1,135,369	+		PFLU_RS05085	0.29	+0.0
1,135,369	+		PFLU_RS05085	0.29	-0.4
1,135,369	+		PFLU_RS05085	0.29	-0.8
1,135,369	+		PFLU_RS05085	0.29	+0.7
1,135,369	+		PFLU_RS05085	0.29	-0.6
1,135,369	+		PFLU_RS05085	0.29	+1.0
1,135,370	-		PFLU_RS05085	0.29	-1.0
1,135,370	-		PFLU_RS05085	0.29	+1.0
1,135,370	-		PFLU_RS05085	0.29	+0.6
1,135,370	-		PFLU_RS05085	0.29	-0.5
1,135,370	-		PFLU_RS05085	0.29	+0.2
1,135,370	-		PFLU_RS05085	0.29	-1.8
1,135,370	-		PFLU_RS05085	0.29	+0.9
1,135,370	-		PFLU_RS05085	0.29	-1.4
1,135,370	-		PFLU_RS05085	0.29	-1.1
1,135,370	-		PFLU_RS05085	0.29	-1.2
1,135,370	-		PFLU_RS05085	0.29	+1.0
1,135,370	-		PFLU_RS05085	0.29	+0.0
1,135,370	-		PFLU_RS05085	0.29	+0.2
1,135,370	-		PFLU_RS05085	0.29	+0.1
1,135,370	-		PFLU_RS05085	0.29	-1.7
1,135,370	-		PFLU_RS05085	0.29	-1.1
1,135,370	-		PFLU_RS05085	0.29	+0.3
1,135,375	+		PFLU_RS05085	0.30	-0.2
1,135,375	+		PFLU_RS05085	0.30	+0.0
1,135,376	-		PFLU_RS05085	0.30	-0.2
1,135,564	+		PFLU_RS05085	0.44	+1.6
1,135,564	+		PFLU_RS05085	0.44	+1.3
1,135,701	-		PFLU_RS05085	0.55	+1.6
1,135,786	+		PFLU_RS05085	0.62	+0.3
1,135,786	+		PFLU_RS05085	0.62	+1.0
1,135,787	-		PFLU_RS05085	0.62	-1.6
1,135,787	-		PFLU_RS05085	0.62	+0.3
1,135,792	+		PFLU_RS05085	0.62	+0.0
1,135,792	+		PFLU_RS05085	0.62	-0.6
1,135,792	+		PFLU_RS05085	0.62	+1.4
1,135,793	-		PFLU_RS05085	0.62	+0.3
1,135,793	-		PFLU_RS05085	0.62	-1.0
1,135,793	-		PFLU_RS05085	0.62	-0.2
1,135,793	-		PFLU_RS05085	0.62	-1.1
1,135,817	+		PFLU_RS05085	0.64	-0.8