Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14485

Experiment: Guanosine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Guanosine 10 mM (C)
3,242,092	+		PFLU_RS14475	0.78	+0.5
3,242,092	+		PFLU_RS14475	0.78	+0.8
3,242,118	+		PFLU_RS14475	0.80	-3.7
3,242,118	+		PFLU_RS14475	0.80	-2.9
3,242,118	+		PFLU_RS14475	0.80	-0.7
3,242,119	-		PFLU_RS14475	0.80	-0.7
3,242,119	-		PFLU_RS14475	0.80	-1.2
3,242,119	-		PFLU_RS14475	0.80	-2.2
3,242,119	-		PFLU_RS14475	0.80	+0.8
3,242,242	+				-2.2
3,242,242	+				-1.7
3,242,242	+				-0.2
3,242,242	+				-2.5
3,242,242	+				+0.4
3,242,243	-				-2.0
3,242,243	-				+1.6
3,242,243	-				-0.5
3,242,243	-				-0.6
3,242,319	+				-1.2
3,242,319	+				-0.7
3,242,320	-				-0.2
3,242,320	-				-1.6
3,242,320	-				-2.3
3,242,320	-				-1.0
3,242,320	-				-2.7
3,242,320	-				-1.2
3,242,359	+				-0.7
3,242,370	+				-0.7
3,242,371	-				+0.4
3,242,436	+		PFLU_RS14480	0.15	-0.7
3,242,437	-		PFLU_RS14480	0.15	-0.7
3,242,437	-		PFLU_RS14480	0.15	+0.8
3,242,460	+		PFLU_RS14480	0.18	-0.7
3,242,460	+		PFLU_RS14480	0.18	-2.5
3,242,460	+		PFLU_RS14480	0.18	-2.2
3,242,460	+		PFLU_RS14480	0.18	-2.0
3,242,460	+		PFLU_RS14480	0.18	-1.2
3,242,460	+		PFLU_RS14480	0.18	-1.6
3,242,460	+		PFLU_RS14480	0.18	-0.7
3,242,712	+		PFLU_RS14480	0.55	-1.7
3,242,712	+		PFLU_RS14480	0.55	-2.2
3,242,712	+		PFLU_RS14480	0.55	-1.5
3,242,712	+		PFLU_RS14480	0.55	-3.6
3,242,713	-		PFLU_RS14480	0.55	-2.3
3,242,713	-		PFLU_RS14480	0.55	-2.9
3,242,713	-		PFLU_RS14480	0.55	+0.8
3,242,713	-		PFLU_RS14480	0.55	-0.7
3,242,713	-		PFLU_RS14480	0.55	-2.2
3,242,823	+		PFLU_RS14480	0.72	-3.1
3,242,823	+		PFLU_RS14480	0.72	-1.2
3,242,823	+		PFLU_RS14480	0.72	-1.2
3,242,823	+		PFLU_RS14480	0.72	-1.5
3,242,823	+		PFLU_RS14480	0.72	-2.2
3,242,823	+		PFLU_RS14480	0.72	-1.7
3,242,823	+		PFLU_RS14480	0.72	-3.5
3,242,823	+		PFLU_RS14480	0.72	-2.3
3,242,823	+		PFLU_RS14480	0.72	+2.3
3,242,824	-		PFLU_RS14480	0.72	-1.9
3,242,824	-		PFLU_RS14480	0.72	-2.2
3,243,018	+				-0.7
3,243,018	+				-2.5
3,243,018	+				-1.7
3,243,019	-				+1.4
3,243,019	-				+0.1
3,243,019	-				+1.5
3,243,019	-				-1.0
3,243,019	-				+0.4
3,243,039	+				-2.0
3,243,039	+				-1.2
3,243,039	+				+0.5
3,243,039	+				-0.2
3,243,040	-				-2.2
3,243,040	-				-0.4
3,243,040	-				-1.4
3,243,040	-				+1.8
3,243,079	-				-3.7
3,243,207	+		PFLU_RS14485	0.25	-0.7
3,243,207	+		PFLU_RS14485	0.25	-0.2
3,243,207	+		PFLU_RS14485	0.25	-1.7
3,243,207	+		PFLU_RS14485	0.25	-2.5
3,243,208	-		PFLU_RS14485	0.25	-2.3
3,243,208	-		PFLU_RS14485	0.25	-2.3
3,243,208	-		PFLU_RS14485	0.25	-2.9
3,243,208	-		PFLU_RS14485	0.25	-2.3
3,243,264	+		PFLU_RS14485	0.33	-2.2
3,243,265	-		PFLU_RS14485	0.33	-0.7
3,243,358	-		PFLU_RS14485	0.45	-0.7
3,243,435	+		PFLU_RS14485	0.55	-2.9
3,243,435	+		PFLU_RS14485	0.55	-3.0
3,243,436	-		PFLU_RS14485	0.55	-3.2
3,243,436	-		PFLU_RS14485	0.55	-0.2
3,243,436	-		PFLU_RS14485	0.55	-1.2
3,243,477	+		PFLU_RS14485	0.61	-2.0
3,243,477	+		PFLU_RS14485	0.61	-0.2
3,243,477	+		PFLU_RS14485	0.61	-1.2
3,243,478	-		PFLU_RS14485	0.61	-2.5
3,243,478	-		PFLU_RS14485	0.61	-2.7
3,243,588	+		PFLU_RS14485	0.75	-1.5
3,243,588	+		PFLU_RS14485	0.75	-0.7
3,243,588	+		PFLU_RS14485	0.75	-3.3
3,243,589	-		PFLU_RS14485	0.75	-1.7
3,243,609	+		PFLU_RS14485	0.78	-3.0
3,243,610	-		PFLU_RS14485	0.78	+2.6
3,243,610	-		PFLU_RS14485	0.78	+0.8
3,243,807	+				+2.2
3,243,807	+				+1.3
3,243,807	+				-3.1
3,243,808	-				-1.3
3,243,808	-				+1.4
3,243,808	-				-0.7
3,243,809	+				+0.1
3,243,809	+				+0.3
3,243,810	-				-0.5
3,243,810	-				+1.2
3,243,810	-				-1.7
3,243,810	-				-2.0
3,243,833	+				-0.2
3,243,833	+				+1.7
3,243,834	-				-0.5
3,243,841	+				-0.6
3,243,841	+				-1.2
3,243,841	+				+0.8
3,243,841	+				-2.2
3,243,842	-				-2.7
3,243,842	-				-0.2
3,243,843	+				+1.0
3,243,844	-				-0.2
3,243,844	-				-2.5
3,243,845	+				+1.6
3,243,865	+				+1.2
3,243,866	-				+0.8
3,243,896	+				-0.4
3,243,896	+				+1.0
3,243,896	+				+1.2
3,243,896	+				-0.3
3,243,896	+				+1.4
3,243,896	+				+0.6
3,243,896	+				+1.0
3,243,896	+				-1.7
3,243,897	-				-0.3
3,243,897	-				-0.5
3,243,897	-				+0.3
3,243,897	-				-0.5
3,243,897	-				-0.7
3,243,944	+				+0.8
3,243,944	+				-1.5
3,243,944	+				+0.3
3,243,944	+				+0.2
3,243,944	+				+0.3
3,243,944	+				-2.9
3,243,945	-				-0.3
3,243,945	-				+0.6
3,243,945	-				+0.0
3,243,945	-				-0.5
3,243,945	-				-2.2
3,243,945	-				-1.0
3,243,945	-				-0.7
3,243,945	-				+0.3
3,243,945	-				+0.8
3,243,945	-				-0.2
3,243,993	+				+0.0
3,244,027	+		PFLU_RS14490	0.12	+0.6
3,244,220	+		PFLU_RS14490	0.31	-2.7
3,244,221	-		PFLU_RS14490	0.31	-0.2
3,244,221	-		PFLU_RS14490	0.31	+1.8
3,244,228	-		PFLU_RS14490	0.31	-0.3
3,244,468	+		PFLU_RS14490	0.54	+0.8
3,244,468	+		PFLU_RS14490	0.54	+1.4
3,244,468	+		PFLU_RS14490	0.54	-1.2
3,244,468	+		PFLU_RS14490	0.54	+0.1
3,244,469	-		PFLU_RS14490	0.54	+0.1
3,244,469	-		PFLU_RS14490	0.54	+0.3
3,244,469	-		PFLU_RS14490	0.54	-1.5
3,244,469	-		PFLU_RS14490	0.54	-1.7
3,244,511	-		PFLU_RS14490	0.58	-0.3
3,244,640	+		PFLU_RS14490	0.70	+1.8
3,244,640	+		PFLU_RS14490	0.70	-2.6
3,244,641	-		PFLU_RS14490	0.70	+1.0
3,244,641	-		PFLU_RS14490	0.70	+0.5
3,244,641	-		PFLU_RS14490	0.70	+2.1
3,244,661	+		PFLU_RS14490	0.72	-2.0
3,244,664	+		PFLU_RS14490	0.73	+0.7
3,244,664	+		PFLU_RS14490	0.73	-0.5
3,244,664	+		PFLU_RS14490	0.73	+0.5
3,244,665	-		PFLU_RS14490	0.73	-0.2
3,244,665	-		PFLU_RS14490	0.73	-2.0
3,244,665	-		PFLU_RS14490	0.73	+1.4
3,244,665	-		PFLU_RS14490	0.73	+0.4
3,244,665	-		PFLU_RS14490	0.73	+0.8
3,244,665	-		PFLU_RS14490	0.73	-1.7
3,244,665	-		PFLU_RS14490	0.73	+2.3