Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14575

Experiment: Guanosine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Guanosine 10 mM (C)
3,256,843	+				+2.1
3,256,843	+				-1.0
3,256,843	+				-2.0
3,256,843	+				-2.0
3,256,843	+				-0.5
3,256,843	+				+0.8
3,256,844	-				-0.9
3,256,844	-				-0.9
3,256,844	-				-0.3
3,256,844	-				-1.7
3,256,844	-				-1.2
3,256,879	+				-0.2
3,256,879	+				-0.3
3,256,879	+				-0.9
3,256,879	+				+0.1
3,256,880	-				+0.4
3,256,880	-				+0.1
3,256,880	-				+1.1
3,256,880	-				-1.2
3,256,945	+				-0.4
3,256,945	+				+0.4
3,256,946	-				-3.5
3,256,948	+				+0.4
3,256,949	-				+0.0
3,256,951	+				+0.7
3,256,951	+				-0.7
3,256,951	+				-1.2
3,256,951	+				-0.2
3,256,952	-				-1.7
3,256,952	-				+0.1
3,256,952	-				-0.0
3,256,965	-				-1.5
3,257,023	+				-0.8
3,257,057	-				-2.6
3,257,085	+				+0.4
3,257,085	+				+0.1
3,257,086	-				+1.5
3,257,086	-				+0.4
3,257,144	+		PFLU_RS14570	0.11	-2.0
3,257,144	+		PFLU_RS14570	0.11	-0.0
3,257,144	+		PFLU_RS14570	0.11	+0.1
3,257,144	+		PFLU_RS14570	0.11	-0.2
3,257,145	-		PFLU_RS14570	0.12	-1.9
3,257,145	-		PFLU_RS14570	0.12	+1.9
3,257,145	-		PFLU_RS14570	0.12	+1.5
3,257,145	-		PFLU_RS14570	0.12	-2.2
3,257,145	-		PFLU_RS14570	0.12	-3.0
3,257,194	+		PFLU_RS14570	0.20	-1.6
3,257,194	+		PFLU_RS14570	0.20	-0.9
3,257,195	-		PFLU_RS14570	0.20	-0.5
3,257,251	+		PFLU_RS14570	0.30	-1.2
3,257,251	+		PFLU_RS14570	0.30	-2.7
3,257,251	+		PFLU_RS14570	0.30	+0.6
3,257,252	-		PFLU_RS14570	0.30	+1.1
3,257,284	+		PFLU_RS14570	0.36	+1.5
3,257,285	-		PFLU_RS14570	0.36	+1.5
3,257,359	+		PFLU_RS14570	0.49	+0.6
3,257,360	-		PFLU_RS14570	0.50	-0.9
3,257,360	-		PFLU_RS14570	0.50	-0.3
3,257,360	-		PFLU_RS14570	0.50	-0.5
3,257,360	-		PFLU_RS14570	0.50	+0.1
3,257,408	+		PFLU_RS14570	0.58	+1.7
3,257,408	+		PFLU_RS14570	0.58	-1.7
3,257,548	+		PFLU_RS14570	0.83	-0.2
3,257,548	+		PFLU_RS14570	0.83	-1.2
3,257,549	-		PFLU_RS14570	0.83	+0.6
3,257,549	-		PFLU_RS14570	0.83	-0.3
3,257,641	+				+0.2
3,257,641	+				-0.5
3,257,641	+				+0.9
3,257,641	+				-0.7
3,257,641	+				-0.5
3,257,641	+				+0.8
3,257,641	+				+0.6
3,257,642	-				-1.0
3,257,642	-				+1.1
3,257,642	-				+1.1
3,257,642	-				+2.0
3,257,642	-				-0.1
3,257,677	+				-0.3
3,257,677	+				-0.3
3,257,677	+				+0.5
3,257,677	+				+0.9
3,257,677	+				-0.8
3,257,677	+				-1.4
3,257,677	+				+0.6
3,257,677	+				-1.7
3,257,677	+				-1.9
3,257,678	-				-0.7
3,257,678	-				+1.1
3,257,678	-				+1.5
3,257,678	-				+0.9
3,257,678	-				-1.4
3,257,678	-				+0.9
3,257,681	+				+0.4
3,257,681	+				+0.6
3,257,681	+				-1.3
3,257,681	+				-0.4
3,257,682	-				-1.2
3,257,682	-				+0.9
3,257,682	-				-1.6
3,257,682	-				-1.8
3,257,682	-				-2.7
3,257,682	-				+0.5
3,257,682	-				-2.9
3,257,682	-				-0.9
3,257,682	-				+0.5
3,257,743	+				+0.2
3,257,743	+				+1.7
3,257,743	+				+2.1
3,257,770	+				-0.5
3,257,771	-				+1.7
3,257,808	-				+0.1
3,257,808	-				-0.5
3,257,808	-				+1.0
3,257,808	-				+1.9
3,257,808	-				+2.1
3,257,911	+				+2.6
3,257,920	+				-3.0
3,257,921	-				+0.0
3,258,113	-		PFLU_RS14575	0.22	-0.3
3,258,137	+		PFLU_RS14575	0.23	-2.0
3,258,137	+		PFLU_RS14575	0.23	+1.1
3,258,137	+		PFLU_RS14575	0.23	-0.2
3,258,137	+		PFLU_RS14575	0.23	+0.7
3,258,138	-		PFLU_RS14575	0.23	+1.7
3,258,138	-		PFLU_RS14575	0.23	-1.7
3,258,138	-		PFLU_RS14575	0.23	+0.5
3,258,138	-		PFLU_RS14575	0.23	-1.3
3,258,138	-		PFLU_RS14575	0.23	+1.6
3,258,290	+		PFLU_RS14575	0.33	+1.4
3,258,455	+		PFLU_RS14575	0.44	-0.4
3,258,466	+		PFLU_RS14575	0.44	+0.0
3,258,466	+		PFLU_RS14575	0.44	+1.1
3,258,466	+		PFLU_RS14575	0.44	-0.4
3,258,467	-		PFLU_RS14575	0.44	+0.7
3,258,467	-		PFLU_RS14575	0.44	-0.9
3,258,467	-		PFLU_RS14575	0.44	+0.7
3,258,472	+		PFLU_RS14575	0.45	+2.6
3,258,472	+		PFLU_RS14575	0.45	+1.1
3,258,473	-		PFLU_RS14575	0.45	+0.7
3,258,473	-		PFLU_RS14575	0.45	-1.7
3,258,597	+		PFLU_RS14575	0.53	-1.2
3,258,598	-		PFLU_RS14575	0.53	-1.7
3,258,598	-		PFLU_RS14575	0.53	-0.9
3,258,605	+		PFLU_RS14575	0.53	+0.4
3,258,606	-		PFLU_RS14575	0.53	+2.7
3,258,606	-		PFLU_RS14575	0.53	+0.0
3,258,606	-		PFLU_RS14575	0.53	-0.9
3,258,776	+		PFLU_RS14575	0.64	-0.4
3,258,776	+		PFLU_RS14575	0.64	+0.1
3,258,776	+		PFLU_RS14575	0.64	+0.1
3,258,931	+		PFLU_RS14575	0.74	-0.2
3,258,931	+		PFLU_RS14575	0.74	-2.2
3,258,932	-		PFLU_RS14575	0.74	+1.0
3,258,968	+		PFLU_RS14575	0.76	+1.3
3,258,968	+		PFLU_RS14575	0.76	-2.2
3,258,969	-		PFLU_RS14575	0.77	+2.6
3,258,969	-		PFLU_RS14575	0.77	+0.6
3,259,052	+		PFLU_RS14575	0.82	-0.3
3,259,052	+		PFLU_RS14575	0.82	-0.9
3,259,052	+		PFLU_RS14575	0.82	+0.7
3,259,052	+		PFLU_RS14575	0.82	-0.4
3,259,053	-		PFLU_RS14575	0.82	+0.0
3,259,053	-		PFLU_RS14575	0.82	-2.4
3,259,215	+				+0.4
3,259,215	+				+0.1
3,259,215	+				-1.9
3,259,215	+				-1.9
3,259,215	+				-2.7
3,259,215	+				-1.7
3,259,216	-				+0.1
3,259,233	+				-1.7
3,259,233	+				+1.1
3,259,233	+				+1.0
3,259,233	+				+1.4
3,259,233	+				+1.3
3,259,233	+				+3.1
3,259,234	-				+0.5
3,259,234	-				-0.4
3,259,234	-				+0.1
3,259,234	-				+0.0
3,259,234	-				+0.1
3,259,234	-				+1.7
3,259,234	-				-1.7
3,259,234	-				-2.0
3,259,234	-				+0.4
3,259,234	-				+0.4
3,259,247	+				-1.9
3,259,247	+				-0.1
3,259,248	-				-1.8
3,259,248	-				-1.1
3,259,248	-				+1.4
3,259,248	-				+2.4
3,259,421	+				-1.4
3,259,527	+		PFLU_RS14580	0.27	-2.8
3,259,548	+		PFLU_RS14580	0.31	+1.7
3,259,548	+		PFLU_RS14580	0.31	+0.8
3,259,549	-		PFLU_RS14580	0.31	+1.3
3,259,573	-		PFLU_RS14580	0.36	-1.1
3,259,586	+		PFLU_RS14580	0.38	+1.3
3,259,587	-		PFLU_RS14580	0.38	+1.6
3,259,587	-		PFLU_RS14580	0.38	-0.4
3,259,718	+		PFLU_RS14580	0.63	-1.3
3,259,719	-		PFLU_RS14580	0.64	+1.1
3,259,719	-		PFLU_RS14580	0.64	+1.3
3,259,719	-		PFLU_RS14580	0.64	+1.1
3,259,719	-		PFLU_RS14580	0.64	-1.6
3,259,784	+		PFLU_RS14580	0.76	+1.4
3,259,784	+		PFLU_RS14580	0.76	+1.8
3,259,784	+		PFLU_RS14580	0.76	-1.4
3,259,784	+		PFLU_RS14580	0.76	-1.2
3,259,785	-		PFLU_RS14580	0.76	-2.6
3,259,785	-		PFLU_RS14580	0.76	-2.8
3,259,800	+		PFLU_RS14580	0.79	+1.9
3,259,800	+		PFLU_RS14580	0.79	-0.9
3,259,801	-		PFLU_RS14580	0.79	+1.0
3,259,801	-		PFLU_RS14580	0.79	+2.6
3,259,801	-		PFLU_RS14580	0.79	+0.5
3,259,801	-		PFLU_RS14580	0.79	-3.3
3,259,801	-		PFLU_RS14580	0.79	-0.5
3,259,943	+				-1.9
3,259,943	+				+0.2
3,259,943	+				+0.8
3,259,944	-				-0.9
3,259,998	+				+0.1
3,259,998	+				+1.0
3,259,998	+				+0.8
3,259,999	-				-2.6
3,260,118	+				-0.4