Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS04565

Experiment: D,L-Malic Acid 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid 20 mM (C)
1,018,013	-				-0.7
1,018,013	-				-0.3
1,018,025	+				+0.8
1,018,025	+				+0.7
1,018,025	+				-0.1
1,018,025	+				+1.2
1,018,025	+				-0.7
1,018,025	+				-0.7
1,018,025	+				-1.2
1,018,025	+				+0.0
1,018,025	+				-0.8
1,018,025	+				-0.4
1,018,025	+				-0.6
1,018,025	+				+0.0
1,018,025	+				+0.9
1,018,026	-				+0.2
1,018,026	-				-0.9
1,018,026	-				-0.8
1,018,026	-				+0.4
1,018,026	-				+0.3
1,018,026	-				+0.8
1,018,026	-				+0.0
1,018,026	-				-1.1
1,018,039	-				+0.7
1,018,039	-				-0.1
1,018,053	-				-0.9
1,018,057	+				-0.9
1,018,057	+				+0.3
1,018,119	+				-2.0
1,018,119	+				-1.9
1,018,120	-				+1.6
1,018,120	-				+0.4
1,018,120	-				+0.1
1,018,120	-				+0.4
1,018,208	+		PFLU_RS04560	0.13	+1.0
1,018,208	+		PFLU_RS04560	0.13	+0.3
1,018,208	+		PFLU_RS04560	0.13	+1.8
1,018,208	+		PFLU_RS04560	0.13	+0.9
1,018,208	+		PFLU_RS04560	0.13	-0.3
1,018,208	+		PFLU_RS04560	0.13	+0.6
1,018,208	+		PFLU_RS04560	0.13	-0.1
1,018,208	+		PFLU_RS04560	0.13	+0.6
1,018,208	+		PFLU_RS04560	0.13	+1.0
1,018,208	+		PFLU_RS04560	0.13	-0.5
1,018,208	+		PFLU_RS04560	0.13	+0.8
1,018,208	+		PFLU_RS04560	0.13	-0.1
1,018,208	+		PFLU_RS04560	0.13	-0.4
1,018,208	+		PFLU_RS04560	0.13	+1.9
1,018,208	+		PFLU_RS04560	0.13	-1.8
1,018,208	+		PFLU_RS04560	0.13	-0.7
1,018,208	+		PFLU_RS04560	0.13	+0.3
1,018,208	+		PFLU_RS04560	0.13	-0.3
1,018,209	-		PFLU_RS04560	0.13	-1.4
1,018,209	-		PFLU_RS04560	0.13	+1.2
1,018,209	-		PFLU_RS04560	0.13	-0.7
1,018,209	-		PFLU_RS04560	0.13	+0.8
1,018,209	-		PFLU_RS04560	0.13	+1.6
1,018,209	-		PFLU_RS04560	0.13	-0.4
1,018,209	-		PFLU_RS04560	0.13	-0.2
1,018,209	-		PFLU_RS04560	0.13	-0.2
1,018,209	-		PFLU_RS04560	0.13	-1.9
1,018,209	-		PFLU_RS04560	0.13	-2.0
1,018,209	-		PFLU_RS04560	0.13	-0.1
1,018,209	-		PFLU_RS04560	0.13	-0.9
1,018,209	-		PFLU_RS04560	0.13	-0.4
1,018,209	-		PFLU_RS04560	0.13	-0.5
1,018,209	-		PFLU_RS04560	0.13	+0.2
1,018,209	-		PFLU_RS04560	0.13	+0.3
1,018,209	-		PFLU_RS04560	0.13	+0.0
1,018,209	-		PFLU_RS04560	0.13	+0.7
1,018,209	-		PFLU_RS04560	0.13	-0.7
1,018,209	-		PFLU_RS04560	0.13	-0.4
1,018,209	-		PFLU_RS04560	0.13	+0.5
1,018,250	+		PFLU_RS04560	0.18	+0.6
1,018,250	+		PFLU_RS04560	0.18	+0.6
1,018,250	+		PFLU_RS04560	0.18	-0.2
1,018,250	+		PFLU_RS04560	0.18	-0.1
1,018,250	+		PFLU_RS04560	0.18	+0.9
1,018,250	+		PFLU_RS04560	0.18	+0.1
1,018,250	+		PFLU_RS04560	0.18	-0.7
1,018,250	+		PFLU_RS04560	0.18	-1.6
1,018,250	+		PFLU_RS04560	0.18	+0.2
1,018,250	+		PFLU_RS04560	0.18	-1.7
1,018,250	+		PFLU_RS04560	0.18	+1.0
1,018,250	+		PFLU_RS04560	0.18	+0.1
1,018,250	+		PFLU_RS04560	0.18	-0.2
1,018,250	+		PFLU_RS04560	0.18	+0.5
1,018,250	+		PFLU_RS04560	0.18	+1.0
1,018,250	+		PFLU_RS04560	0.18	-0.4
1,018,250	+		PFLU_RS04560	0.18	-0.4
1,018,250	+		PFLU_RS04560	0.18	-0.3
1,018,251	-		PFLU_RS04560	0.18	-1.4
1,018,251	-		PFLU_RS04560	0.18	-0.7
1,018,251	-		PFLU_RS04560	0.18	-1.5
1,018,251	-		PFLU_RS04560	0.18	+0.9
1,018,251	-		PFLU_RS04560	0.18	+1.0
1,018,251	-		PFLU_RS04560	0.18	-0.7
1,018,251	-		PFLU_RS04560	0.18	-1.0
1,018,251	-		PFLU_RS04560	0.18	+0.9
1,018,251	-		PFLU_RS04560	0.18	-1.2
1,018,251	-		PFLU_RS04560	0.18	+0.2
1,018,251	-		PFLU_RS04560	0.18	-0.4
1,018,251	-		PFLU_RS04560	0.18	+1.6
1,018,251	-		PFLU_RS04560	0.18	+1.0
1,018,251	-		PFLU_RS04560	0.18	+0.7
1,018,251	-		PFLU_RS04560	0.18	-1.7
1,018,251	-		PFLU_RS04560	0.18	-1.6
1,018,469	+		PFLU_RS04560	0.45	+0.5
1,018,469	+		PFLU_RS04560	0.45	+0.2
1,018,469	+		PFLU_RS04560	0.45	+0.5
1,018,470	-		PFLU_RS04560	0.45	+0.1
1,018,584	-		PFLU_RS04560	0.59	+0.4
1,018,670	+		PFLU_RS04560	0.70	-1.0
1,018,670	+		PFLU_RS04560	0.70	-0.4
1,018,670	+		PFLU_RS04560	0.70	+0.8
1,018,670	+		PFLU_RS04560	0.70	+0.1
1,018,670	+		PFLU_RS04560	0.70	+0.5
1,018,671	-		PFLU_RS04560	0.70	+0.1
1,018,671	-		PFLU_RS04560	0.70	+1.5
1,018,671	-		PFLU_RS04560	0.70	+0.0
1,018,751	+		PFLU_RS04560	0.79	+0.8
1,018,751	+		PFLU_RS04560	0.79	+0.7
1,018,751	+		PFLU_RS04560	0.79	+0.4
1,018,752	-		PFLU_RS04560	0.80	-0.2
1,018,752	-		PFLU_RS04560	0.80	+0.3
1,018,752	-		PFLU_RS04560	0.80	-0.4
1,018,752	-		PFLU_RS04560	0.80	+0.9
1,018,783	+		PFLU_RS04560	0.83	+0.1
1,018,783	+		PFLU_RS04560	0.83	-0.1
1,018,783	+		PFLU_RS04560	0.83	+1.1
1,018,784	-		PFLU_RS04560	0.84	-0.7
1,018,895	+				-0.8
1,018,895	+				-0.0
1,018,896	-				+0.1
1,018,896	-				+0.0
1,018,928	-				-0.3
1,018,928	-				+0.2
1,019,014	+				-0.3
1,019,014	+				-0.5
1,019,014	+				+0.8
1,019,014	+				+0.3
1,019,015	-				+0.3
1,019,015	-				+1.1
1,019,015	-				-0.3
1,019,044	+				+0.3
1,019,044	+				+0.3
1,019,044	+				+0.0
1,019,044	+				-0.1
1,019,044	+				+0.1
1,019,044	+				+0.5
1,019,044	+				+0.6
1,019,044	+				+1.3
1,019,044	+				-0.1
1,019,044	+				-0.9
1,019,045	-				+0.4
1,019,045	-				+0.6
1,019,045	-				+0.6
1,019,140	-		PFLU_RS04565	0.22	+1.6
1,019,309	+		PFLU_RS04565	0.51	+0.4
1,019,583	+				+1.0
1,019,583	+				-1.0
1,019,584	-				+0.2
1,019,602	+				-0.1
1,019,602	+				-0.4
1,019,602	+				-0.5
1,019,602	+				-0.4
1,019,602	+				+0.7
1,019,603	-				+0.0
1,019,630	+				-0.1
1,019,630	+				-0.5
1,019,630	+				-1.0
1,019,631	-				-0.8
1,019,631	-				+1.4
1,019,639	+				-0.4
1,019,639	+				+0.9
1,019,639	+				+0.5
1,019,639	+				+0.6
1,019,639	+				-1.6
1,019,639	+				+0.6
1,019,639	+				+0.9
1,019,639	+				+1.4
1,019,639	+				-0.3
1,019,639	+				+1.2
1,019,640	-				-0.9
1,019,640	-				+0.5
1,019,640	-				+1.5
1,019,640	-				+1.0
1,019,640	-				-1.0
1,019,640	-				+0.2
1,019,640	-				-0.1
1,019,675	+				-0.9
1,019,675	+				+0.3
1,019,675	+				+0.0
1,019,675	+				-0.6
1,019,675	+				-0.1
1,019,675	+				+0.6
1,019,675	+				-0.7
1,019,675	+				-0.6
1,019,675	+				+0.1
1,019,675	+				+0.4
1,019,675	+				+0.1
1,019,675	+				-1.2
1,019,676	-				+0.6
1,019,676	-				+0.4
1,019,676	-				-0.3
1,019,676	-				+0.4
1,019,676	-				-0.6
1,019,676	-				-0.1
1,019,676	-				+0.9
1,019,676	-				-1.5
1,019,676	-				-0.3
1,019,676	-				-0.9
1,019,676	-				-1.0
1,019,676	-				-0.5
1,019,676	-				+0.5
1,019,676	-				+0.4
1,019,676	-				+0.4
1,019,676	-				-0.8
1,019,676	-				-0.3
1,019,676	-				-1.0
1,019,676	-				+0.3
1,019,722	+				+0.3
1,019,722	+				+3.6
1,019,722	+				+0.3
1,019,722	+				-1.1
1,019,722	+				-0.2
1,019,723	-				+0.0
1,019,723	-				+1.6
1,019,745	+				+0.6
1,019,745	+				+0.1
1,019,745	+				-0.3
1,019,745	+				+1.0
1,019,745	+				-0.2
1,019,745	+				-0.5
1,019,745	+				-0.7
1,019,745	+				+0.3
1,019,745	+				+0.0
1,019,745	+				-1.6
1,019,745	+				-1.2
1,019,745	+				-1.4
1,019,745	+				-2.2
1,019,745	+				-0.3
1,019,745	+				+0.5
1,019,745	+				+0.6
1,019,745	+				+0.8
1,019,745	+				+0.1
1,019,745	+				+1.6
1,019,745	+				-0.5
1,019,745	+				+0.0
1,019,746	-				-0.0
1,019,746	-				+0.6
1,019,746	-				-1.1
1,019,746	-				-1.0
1,019,746	-				-0.1
1,019,746	-				-0.2
1,019,746	-				-0.8
1,019,746	-				+0.4
1,019,746	-				-0.5
1,019,746	-				+1.0
1,019,746	-				+1.3
1,019,746	-				+0.3
1,019,746	-				+0.6
1,019,746	-				+0.8
1,019,746	-				+0.8
1,019,746	-				-1.5
1,019,746	-				+0.0
1,019,746	-				+0.2
1,019,746	-				-1.3
1,019,746	-				-1.4
1,019,746	-				+0.0
1,019,746	-				-0.1
1,019,746	-				+1.3
1,019,746	-				+0.0
1,019,746	-				+0.1
1,019,746	-				+0.4
1,019,746	-				-0.5
1,019,746	-				-1.5
1,019,746	-				+0.6
1,019,746	-				-0.1
1,019,746	-				-1.1
1,019,755	+				+1.1
1,019,755	+				-1.1
1,019,755	+				-1.9
1,019,755	+				+0.6
1,019,755	+				+0.6
1,019,755	+				-1.0
1,019,755	+				+0.5
1,019,755	+				+1.2
1,019,756	-				-0.6
1,019,756	-				+0.2
1,019,756	-				+1.0
1,019,756	-				-0.7
1,019,787	+				-0.2
1,019,787	+				+0.5
1,019,787	+				+1.6
1,019,787	+				-1.0
1,019,788	-				+0.3
1,019,788	-				+0.7
1,019,788	-				+0.2
1,019,788	-				+0.5
1,019,788	-				-0.3
1,019,788	-				-0.5
1,019,788	-				-0.9
1,019,788	-				+0.2
1,019,788	-				+0.9
1,019,795	+				-0.3
1,019,816	+				+0.7
1,019,877	+				-0.9
1,019,877	+				+1.6
1,019,877	+				+1.3
1,019,877	+				+0.2
1,019,877	+				-0.1
1,019,877	+				+0.6
1,019,877	+				-0.7
1,019,877	+				-0.2
1,019,877	+				+0.4
1,019,878	-				-0.7
1,019,878	-				+1.1
1,019,878	-				+0.7
1,019,878	-				-0.3
1,019,878	-				+0.7
1,019,878	-				-0.7
1,019,878	-				+0.0
1,019,878	-				-1.6
1,019,878	-				+0.2
1,019,959	+		PFLU_RS04570	0.10	+0.7
1,020,125	+		PFLU_RS04570	0.27	+0.8
1,020,125	+		PFLU_RS04570	0.27	-0.1
1,020,125	+		PFLU_RS04570	0.27	+0.7
1,020,126	-		PFLU_RS04570	0.27	+0.3
1,020,126	-		PFLU_RS04570	0.27	+1.9
1,020,126	-		PFLU_RS04570	0.27	+1.6
1,020,230	+		PFLU_RS04570	0.37	+0.3
1,020,245	+		PFLU_RS04570	0.39	-0.3
1,020,246	-		PFLU_RS04570	0.39	+0.0