Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21640

Experiment: L-Alanine 15 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine 15 mM (C)
4,876,031	+				-0.6
4,876,032	-				-0.3
4,876,100	+				-1.1
4,876,100	+				-0.5
4,876,100	+				-1.7
4,876,100	+				+0.2
4,876,100	+				-0.9
4,876,100	+				-2.1
4,876,100	+				-1.6
4,876,100	+				-0.6
4,876,100	+				-1.1
4,876,100	+				+0.2
4,876,101	-				-1.1
4,876,101	-				-1.8
4,876,101	-				-0.7
4,876,101	-				-1.8
4,876,101	-				+0.6
4,876,101	-				+0.2
4,876,101	-				-2.8
4,876,101	-				+0.2
4,876,101	-				-1.0
4,876,101	-				-1.0
4,876,101	-				-1.6
4,876,101	-				+0.8
4,876,101	-				+0.1
4,876,101	-				+0.1
4,876,101	-				-1.0
4,876,101	-				-0.1
4,876,227	+		PFLU_RS31755	0.69	-0.9
4,876,227	+		PFLU_RS31755	0.69	-1.1
4,876,273	+				+0.2
4,876,273	+				-0.7
4,876,273	+				+1.7
4,876,273	+				-1.6
4,876,273	+				+0.0
4,876,273	+				+0.7
4,876,274	-				-3.1
4,876,274	-				+1.1
4,876,274	-				-0.5
4,876,274	-				-0.8
4,876,274	-				+0.4
4,876,277	+				-0.8
4,876,277	+				-0.7
4,876,277	+				+0.2
4,876,277	+				-0.3
4,876,277	+				+0.1
4,876,278	-				-0.1
4,876,278	-				+0.2
4,876,278	-				+1.0
4,876,278	-				-0.3
4,876,278	-				-0.2
4,876,278	-				+0.5
4,876,278	-				+0.3
4,876,278	-				-0.1
4,876,278	-				+0.8
4,876,458	+		PFLU_RS21635	0.23	+0.3
4,876,458	+		PFLU_RS21635	0.23	+0.0
4,876,459	-		PFLU_RS21635	0.23	+1.0
4,876,459	-		PFLU_RS21635	0.23	-0.6
4,876,459	-		PFLU_RS21635	0.23	-0.2
4,876,459	-		PFLU_RS21635	0.23	-0.8
4,876,459	-		PFLU_RS21635	0.23	+0.7
4,876,558	+		PFLU_RS21635	0.36	-2.0
4,876,558	+		PFLU_RS21635	0.36	-1.8
4,876,632	+		PFLU_RS21635	0.46	+0.5
4,876,632	+		PFLU_RS21635	0.46	-1.1
4,876,632	+		PFLU_RS21635	0.46	-1.3
4,876,632	+		PFLU_RS21635	0.46	-0.4
4,876,632	+		PFLU_RS21635	0.46	-0.5
4,876,632	+		PFLU_RS21635	0.46	-0.6
4,876,632	+		PFLU_RS21635	0.46	+0.3
4,876,633	-		PFLU_RS21635	0.46	-1.7
4,876,633	-		PFLU_RS21635	0.46	+1.0
4,876,633	-		PFLU_RS21635	0.46	-2.1
4,876,633	-		PFLU_RS21635	0.46	-0.6
4,876,710	+		PFLU_RS21635	0.57	+0.2
4,876,710	+		PFLU_RS21635	0.57	-0.3
4,876,710	+		PFLU_RS21635	0.57	-1.4
4,876,710	+		PFLU_RS21635	0.57	-0.3
4,876,968	+				-0.6
4,876,968	+				+0.1
4,876,968	+				+1.1
4,876,968	+				-0.4
4,876,968	+				+0.7
4,876,968	+				-1.1
4,876,968	+				+1.3
4,876,968	+				+0.7
4,876,968	+				-1.3
4,876,969	-				+0.3
4,876,969	-				-0.3
4,876,969	-				-0.6
4,876,969	-				-0.8
4,876,969	-				-0.4
4,876,969	-				-0.1
4,876,969	-				+0.0
4,877,021	+				-0.1
4,877,021	+				+0.2
4,877,021	+				-0.9
4,877,021	+				+0.1
4,877,021	+				-1.2
4,877,021	+				-1.0
4,877,021	+				-0.5
4,877,021	+				-0.5
4,877,021	+				-0.5
4,877,021	+				+0.2
4,877,021	+				-0.5
4,877,021	+				+0.0
4,877,021	+				-1.4
4,877,021	+				-1.3
4,877,021	+				-1.5
4,877,021	+				+0.6
4,877,021	+				-1.5
4,877,021	+				-0.5
4,877,021	+				-0.8
4,877,021	+				-1.2
4,877,022	-				-0.3
4,877,022	-				-0.7
4,877,022	-				+0.5
4,877,022	-				+0.2
4,877,022	-				-0.4
4,877,022	-				+0.8
4,877,022	-				-0.5
4,877,022	-				+0.0
4,877,022	-				+0.1
4,877,022	-				+0.0
4,877,022	-				-1.5
4,877,022	-				+0.9
4,877,022	-				-1.3
4,877,022	-				-0.1
4,877,022	-				+0.2
4,877,022	-				+1.3
4,877,022	-				+0.5
4,877,022	-				-0.6
4,877,022	-				-0.7
4,877,022	-				-0.5
4,877,022	-				+0.6
4,877,075	+				+0.0
4,877,076	-				-1.0
4,877,076	-				-0.3
4,877,076	-				+0.1
4,877,123	+				-1.1
4,877,123	+				-0.9
4,877,123	+				-0.1
4,877,123	+				+0.3
4,877,123	+				-0.3
4,877,123	+				+0.0
4,877,123	+				-1.7
4,877,123	+				-0.7
4,877,123	+				-0.3
4,877,123	+				-0.2
4,877,123	+				-1.1
4,877,123	+				+0.5
4,877,123	+				-1.0
4,877,123	+				-2.3
4,877,123	+				-0.4
4,877,124	-				-0.3
4,877,124	-				-1.3
4,877,124	-				-2.2
4,877,124	-				-0.7
4,877,124	-				+0.8
4,877,124	-				-0.3
4,877,124	-				+0.3
4,877,124	-				+0.3
4,877,124	-				+0.3
4,877,124	-				-2.5
4,877,124	-				+0.6
4,877,247	-		PFLU_RS21640	0.19	-0.8
4,877,291	+		PFLU_RS21640	0.23	-0.4
4,877,291	+		PFLU_RS21640	0.23	-1.8
4,877,291	+		PFLU_RS21640	0.23	-0.3
4,877,291	+		PFLU_RS21640	0.23	-2.0
4,877,292	-		PFLU_RS21640	0.23	+0.6
4,877,292	-		PFLU_RS21640	0.23	-3.0
4,877,292	-		PFLU_RS21640	0.23	-1.7
4,877,292	-		PFLU_RS21640	0.23	+0.9
4,877,292	-		PFLU_RS21640	0.23	+0.2
4,877,292	-		PFLU_RS21640	0.23	-1.7
4,877,292	-		PFLU_RS21640	0.23	+1.2
4,877,292	-		PFLU_RS21640	0.23	+0.3
4,877,292	-		PFLU_RS21640	0.23	-0.8
4,877,292	-		PFLU_RS21640	0.23	-1.5
4,877,292	-		PFLU_RS21640	0.23	-0.0
4,877,565	+		PFLU_RS21640	0.47	-1.3
4,877,565	+		PFLU_RS21640	0.47	+0.7
4,877,565	+		PFLU_RS21640	0.47	-0.8
4,877,565	+		PFLU_RS21640	0.47	-2.1
4,877,565	+		PFLU_RS21640	0.47	-1.3
4,877,565	+		PFLU_RS21640	0.47	-0.6
4,877,565	+		PFLU_RS21640	0.47	+0.1
4,877,566	-		PFLU_RS21640	0.47	-0.7
4,877,566	-		PFLU_RS21640	0.47	-1.7
4,877,566	-		PFLU_RS21640	0.47	-2.4
4,877,585	+		PFLU_RS21640	0.49	-0.7
4,877,585	+		PFLU_RS21640	0.49	+0.3
4,877,585	+		PFLU_RS21640	0.49	-0.3
4,877,585	+		PFLU_RS21640	0.49	+0.1
4,877,586	-		PFLU_RS21640	0.49	+1.9
4,877,772	+		PFLU_RS21640	0.65	-0.6
4,877,962	-		PFLU_RS21640	0.82	-1.8
4,877,962	-		PFLU_RS21640	0.82	-2.4
4,878,003	-		PFLU_RS21640	0.85	+0.3
4,878,003	-		PFLU_RS21640	0.85	-1.3
4,878,003	-		PFLU_RS21640	0.85	-0.6
4,878,222	+				+1.7
4,878,223	-				-0.7
4,878,480	-		PFLU_RS21645	0.12	-1.3
4,878,689	+		PFLU_RS21645	0.21	-2.3
4,878,689	+		PFLU_RS21645	0.21	+1.1
4,878,689	+		PFLU_RS21645	0.21	-0.5
4,878,689	+		PFLU_RS21645	0.21	+0.1
4,878,689	+		PFLU_RS21645	0.21	-3.2
4,878,689	+		PFLU_RS21645	0.21	+1.8
4,878,689	+		PFLU_RS21645	0.21	+0.1
4,878,689	+		PFLU_RS21645	0.21	-0.7
4,878,690	-		PFLU_RS21645	0.21	-2.1
4,878,690	-		PFLU_RS21645	0.21	-0.7
4,878,690	-		PFLU_RS21645	0.21	-0.3
4,878,690	-		PFLU_RS21645	0.21	+0.3
4,878,690	-		PFLU_RS21645	0.21	-1.7
4,878,690	-		PFLU_RS21645	0.21	-0.3
4,878,690	-		PFLU_RS21645	0.21	-0.8
4,878,812	+		PFLU_RS21645	0.27	-0.8
4,878,812	+		PFLU_RS21645	0.27	-1.1
4,878,812	+		PFLU_RS21645	0.27	+0.5
4,878,812	+		PFLU_RS21645	0.27	-2.4
4,878,812	+		PFLU_RS21645	0.27	-0.5
4,878,812	+		PFLU_RS21645	0.27	-1.3
4,878,812	+		PFLU_RS21645	0.27	-0.3
4,878,812	+		PFLU_RS21645	0.27	-2.2
4,878,812	+		PFLU_RS21645	0.27	-0.9
4,878,812	+		PFLU_RS21645	0.27	-0.2
4,878,812	+		PFLU_RS21645	0.27	-1.3
4,878,812	+		PFLU_RS21645	0.27	-2.2
4,878,813	-		PFLU_RS21645	0.27	+1.3
4,878,813	-		PFLU_RS21645	0.27	-1.4
4,878,813	-		PFLU_RS21645	0.27	-1.5
4,878,813	-		PFLU_RS21645	0.27	-3.1
4,878,813	-		PFLU_RS21645	0.27	-0.9
4,878,813	-		PFLU_RS21645	0.27	-0.9
4,878,813	-		PFLU_RS21645	0.27	-2.6
4,878,813	-		PFLU_RS21645	0.27	-0.2
4,878,813	-		PFLU_RS21645	0.27	+0.3
4,878,813	-		PFLU_RS21645	0.27	+0.3
4,878,813	-		PFLU_RS21645	0.27	-0.7
4,878,813	-		PFLU_RS21645	0.27	-0.7
4,878,813	-		PFLU_RS21645	0.27	-0.3