Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS15935

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
3,620,985	-		PFLU_RS15930	0.45	+0.5
3,621,189	+		PFLU_RS15930	0.59	+0.3
3,621,281	+		PFLU_RS15930	0.65	-1.3
3,621,294	+		PFLU_RS15930	0.66	-0.3
3,621,312	+		PFLU_RS15930	0.68	+1.5
3,621,312	+		PFLU_RS15930	0.68	+2.1
3,621,312	+		PFLU_RS15930	0.68	+1.1
3,621,313	-		PFLU_RS15930	0.68	-0.8
3,621,313	-		PFLU_RS15930	0.68	-0.8
3,621,449	+		PFLU_RS15930	0.77	-0.9
3,621,450	-		PFLU_RS15930	0.77	-1.1
3,621,541	-		PFLU_RS15930	0.83	+0.2
3,621,555	+		PFLU_RS15930	0.84	-1.1
3,621,555	+		PFLU_RS15930	0.84	-1.2
3,621,555	+		PFLU_RS15930	0.84	-0.6
3,621,555	+		PFLU_RS15930	0.84	-0.2
3,621,555	+		PFLU_RS15930	0.84	-1.8
3,621,555	+		PFLU_RS15930	0.84	+1.2
3,621,556	-		PFLU_RS15930	0.84	+0.2
3,621,556	-		PFLU_RS15930	0.84	+0.9
3,621,556	-		PFLU_RS15930	0.84	+0.7
3,621,556	-		PFLU_RS15930	0.84	+1.0
3,621,556	-		PFLU_RS15930	0.84	+0.5
3,621,557	+		PFLU_RS15930	0.84	-0.4
3,621,558	-		PFLU_RS15930	0.84	-0.7
3,621,558	-		PFLU_RS15930	0.84	+1.1
3,621,624	-		PFLU_RS15930	0.89	+0.5
3,621,705	+				-1.5
3,621,706	-				+0.0
3,621,706	-				+0.9
3,621,817	+				+0.5
3,621,817	+				+1.1
3,621,818	-				+0.4
3,621,818	-				-2.5
3,621,873	+				+0.5
3,621,874	-				-0.8
3,621,884	+				+0.3
3,621,884	+				+1.2
3,621,884	+				-0.7
3,621,884	+				-0.5
3,621,885	-				-2.8
3,621,885	-				-0.5
3,621,885	-				-0.6
3,621,885	-				+1.7
3,621,885	-				+0.3
3,621,885	-				-0.5
3,622,025	+		PFLU_RS15935	0.22	+0.5
3,622,061	+		PFLU_RS15935	0.26	-0.9
3,622,061	+		PFLU_RS15935	0.26	-0.5
3,622,061	+		PFLU_RS15935	0.26	-0.0
3,622,062	-		PFLU_RS15935	0.26	+1.3
3,622,062	-		PFLU_RS15935	0.26	+0.9
3,622,062	-		PFLU_RS15935	0.26	-0.9
3,622,062	-		PFLU_RS15935	0.26	-1.0
3,622,062	-		PFLU_RS15935	0.26	-0.2
3,622,062	-		PFLU_RS15935	0.26	+0.7
3,622,062	-		PFLU_RS15935	0.26	-0.2
3,622,062	-		PFLU_RS15935	0.26	-0.7
3,622,103	+		PFLU_RS15935	0.31	-0.1
3,622,103	+		PFLU_RS15935	0.31	+0.1
3,622,104	-		PFLU_RS15935	0.31	-0.3
3,622,167	+		PFLU_RS15935	0.39	+0.9
3,622,167	+		PFLU_RS15935	0.39	+0.5
3,622,168	-		PFLU_RS15935	0.39	+2.1
3,622,232	+		PFLU_RS15935	0.46	+0.5
3,622,233	-		PFLU_RS15935	0.46	+0.4
3,622,233	-		PFLU_RS15935	0.46	-0.3
3,622,613	+				-0.1
3,622,760	+				-0.2
3,622,760	+				+0.9
3,622,760	+				-0.5
3,622,761	-				+0.7
3,622,761	-				-0.4
3,622,914	-		PFLU_RS15940	0.45	-0.2
3,623,197	-				-1.1
3,623,197	-				-1.8
3,623,281	+				+1.4
3,623,398	+		PFLU_RS15945	0.17	+0.0
3,623,530	+		PFLU_RS15945	0.27	-0.1
3,623,530	+		PFLU_RS15945	0.27	+0.2
3,623,530	+		PFLU_RS15945	0.27	+0.9
3,623,530	+		PFLU_RS15945	0.27	-1.1
3,623,531	-		PFLU_RS15945	0.27	+0.2
3,623,531	-		PFLU_RS15945	0.27	+0.4
3,623,531	-		PFLU_RS15945	0.27	-0.1
3,623,531	-		PFLU_RS15945	0.27	-1.3
3,623,531	-		PFLU_RS15945	0.27	-0.7
3,623,531	-		PFLU_RS15945	0.27	-0.1
3,623,531	-		PFLU_RS15945	0.27	-0.9
3,623,531	-		PFLU_RS15945	0.27	+1.0
3,623,531	-		PFLU_RS15945	0.27	-0.6