Experiment: D-Trehalose 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS08490 and PFLU_RS08495 are separated by 124 nucleotides PFLU_RS08495 and PFLU_RS08500 are separated by 103 nucleotides
PFLU_RS08490: PFLU_RS08490 - DEAD/DEAH box helicase, at 1,891,666 to 1,893,339
_RS08490
PFLU_RS08495: PFLU_RS08495 - dioxygenase, at 1,893,464 to 1,894,231
_RS08495
PFLU_RS08500: PFLU_RS08500 - thiopurine S-methyltransferase, at 1,894,335 to 1,894,991
_RS08500
Position (kb) 1893
1894
1895 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1893.039 kb on + strand, within PFLU_RS08490 at 1893.039 kb on + strand, within PFLU_RS08490 at 1893.367 kb on + strand at 1893.368 kb on - strand at 1893.368 kb on - strand at 1893.477 kb on + strand at 1893.477 kb on + strand at 1893.477 kb on + strand at 1893.477 kb on + strand at 1893.477 kb on + strand at 1893.477 kb on + strand at 1893.477 kb on + strand at 1893.477 kb on + strand at 1893.477 kb on + strand at 1893.477 kb on + strand at 1893.477 kb on + strand at 1893.478 kb on - strand at 1893.478 kb on - strand at 1893.478 kb on - strand at 1893.478 kb on - strand at 1893.478 kb on - strand at 1893.478 kb on - strand at 1893.478 kb on - strand at 1893.555 kb on + strand, within PFLU_RS08495 at 1893.556 kb on - strand, within PFLU_RS08495 at 1893.619 kb on - strand, within PFLU_RS08495 at 1893.655 kb on + strand, within PFLU_RS08495 at 1893.655 kb on + strand, within PFLU_RS08495 at 1893.656 kb on - strand, within PFLU_RS08495 at 1893.830 kb on - strand, within PFLU_RS08495 at 1893.876 kb on + strand, within PFLU_RS08495 at 1893.876 kb on + strand, within PFLU_RS08495 at 1893.876 kb on + strand, within PFLU_RS08495 at 1893.876 kb on + strand, within PFLU_RS08495 at 1893.929 kb on + strand, within PFLU_RS08495 at 1893.929 kb on + strand, within PFLU_RS08495 at 1893.929 kb on + strand, within PFLU_RS08495 at 1893.929 kb on + strand, within PFLU_RS08495 at 1893.929 kb on + strand, within PFLU_RS08495 at 1893.929 kb on + strand, within PFLU_RS08495 at 1893.929 kb on + strand, within PFLU_RS08495 at 1893.930 kb on - strand, within PFLU_RS08495 at 1893.930 kb on - strand, within PFLU_RS08495 at 1893.930 kb on - strand, within PFLU_RS08495 at 1894.213 kb on + strand at 1894.213 kb on + strand at 1894.213 kb on + strand at 1894.213 kb on + strand at 1894.214 kb on - strand at 1894.214 kb on - strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.231 kb on + strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.232 kb on - strand at 1894.285 kb on - strand at 1894.290 kb on + strand at 1894.290 kb on + strand at 1894.290 kb on + strand at 1894.291 kb on - strand at 1894.291 kb on - strand at 1894.295 kb on + strand at 1894.296 kb on - strand at 1894.296 kb on - strand at 1894.296 kb on - strand at 1894.302 kb on + strand at 1894.302 kb on + strand at 1894.344 kb on - strand at 1894.407 kb on + strand, within PFLU_RS08500 at 1894.408 kb on - strand, within PFLU_RS08500 at 1894.614 kb on + strand, within PFLU_RS08500 at 1894.615 kb on - strand, within PFLU_RS08500 at 1894.693 kb on + strand, within PFLU_RS08500 at 1894.693 kb on + strand, within PFLU_RS08500 at 1894.693 kb on + strand, within PFLU_RS08500 at 1894.693 kb on + strand, within PFLU_RS08500 at 1894.693 kb on + strand, within PFLU_RS08500 at 1894.693 kb on + strand, within PFLU_RS08500 at 1894.693 kb on + strand, within PFLU_RS08500 at 1894.693 kb on + strand, within PFLU_RS08500 at 1894.693 kb on + strand, within PFLU_RS08500 at 1894.693 kb on + strand, within PFLU_RS08500 at 1894.693 kb on + strand, within PFLU_RS08500 at 1894.694 kb on - strand, within PFLU_RS08500 at 1894.694 kb on - strand, within PFLU_RS08500 at 1894.694 kb on - strand, within PFLU_RS08500 at 1894.694 kb on - strand, within PFLU_RS08500 at 1894.694 kb on - strand, within PFLU_RS08500 at 1894.694 kb on - strand, within PFLU_RS08500 at 1894.694 kb on - strand, within PFLU_RS08500 at 1894.694 kb on - strand, within PFLU_RS08500 at 1894.694 kb on - strand, within PFLU_RS08500 at 1894.694 kb on - strand, within PFLU_RS08500 at 1894.694 kb on - strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.695 kb on + strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.696 kb on - strand, within PFLU_RS08500 at 1894.806 kb on + strand, within PFLU_RS08500 at 1894.806 kb on + strand, within PFLU_RS08500 at 1894.806 kb on + strand, within PFLU_RS08500 at 1894.806 kb on + strand, within PFLU_RS08500 at 1894.806 kb on + strand, within PFLU_RS08500 at 1894.806 kb on + strand, within PFLU_RS08500 at 1894.807 kb on - strand, within PFLU_RS08500 at 1894.807 kb on - strand, within PFLU_RS08500 at 1894.807 kb on - strand, within PFLU_RS08500 at 1894.807 kb on - strand, within PFLU_RS08500 at 1894.858 kb on + strand, within PFLU_RS08500 at 1894.858 kb on + strand, within PFLU_RS08500 at 1894.858 kb on + strand, within PFLU_RS08500 at 1894.858 kb on + strand, within PFLU_RS08500 at 1894.858 kb on + strand, within PFLU_RS08500 at 1894.859 kb on - strand, within PFLU_RS08500 at 1894.859 kb on - strand, within PFLU_RS08500 at 1894.859 kb on - strand, within PFLU_RS08500 at 1894.859 kb on - strand, within PFLU_RS08500 at 1894.859 kb on - strand, within PFLU_RS08500 at 1894.859 kb on - strand, within PFLU_RS08500 at 1894.859 kb on - strand, within PFLU_RS08500 at 1894.859 kb on - strand, within PFLU_RS08500 at 1894.982 kb on + strand at 1895.071 kb on + strand at 1895.071 kb on + strand at 1895.071 kb on + strand at 1895.071 kb on + strand at 1895.078 kb on + strand at 1895.078 kb on + strand at 1895.177 kb on + strand at 1895.177 kb on + strand at 1895.177 kb on + strand at 1895.177 kb on + strand at 1895.177 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose 5 mM (C) remove 1,893,039 + PFLU_RS08490 0.82 +0.4 1,893,039 + PFLU_RS08490 0.82 -1.2 1,893,367 + +1.9 1,893,368 - -0.1 1,893,368 - +1.4 1,893,477 + +0.4 1,893,477 + -0.5 1,893,477 + -0.2 1,893,477 + +0.3 1,893,477 + +0.1 1,893,477 + -0.4 1,893,477 + -0.6 1,893,477 + +0.9 1,893,477 + +0.8 1,893,477 + +0.9 1,893,477 + +0.9 1,893,478 - +0.1 1,893,478 - -0.7 1,893,478 - +0.4 1,893,478 - -2.4 1,893,478 - +0.8 1,893,478 - -0.5 1,893,478 - -1.2 1,893,555 + PFLU_RS08495 0.12 +0.5 1,893,556 - PFLU_RS08495 0.12 +0.1 1,893,619 - PFLU_RS08495 0.20 +0.8 1,893,655 + PFLU_RS08495 0.25 +0.6 1,893,655 + PFLU_RS08495 0.25 +2.8 1,893,656 - PFLU_RS08495 0.25 -0.2 1,893,830 - PFLU_RS08495 0.48 -0.6 1,893,876 + PFLU_RS08495 0.54 +0.8 1,893,876 + PFLU_RS08495 0.54 -1.6 1,893,876 + PFLU_RS08495 0.54 +0.1 1,893,876 + PFLU_RS08495 0.54 +1.4 1,893,929 + PFLU_RS08495 0.61 +0.5 1,893,929 + PFLU_RS08495 0.61 +1.2 1,893,929 + PFLU_RS08495 0.61 +0.5 1,893,929 + PFLU_RS08495 0.61 +1.2 1,893,929 + PFLU_RS08495 0.61 -0.9 1,893,929 + PFLU_RS08495 0.61 +0.6 1,893,929 + PFLU_RS08495 0.61 -0.2 1,893,930 - PFLU_RS08495 0.61 +0.6 1,893,930 - PFLU_RS08495 0.61 +0.9 1,893,930 - PFLU_RS08495 0.61 +2.2 1,894,213 + +0.2 1,894,213 + +0.1 1,894,213 + +0.2 1,894,213 + -1.1 1,894,214 - +0.4 1,894,214 - -1.1 1,894,231 + -0.1 1,894,231 + +0.5 1,894,231 + -0.4 1,894,231 + +0.2 1,894,231 + +0.4 1,894,231 + -1.2 1,894,231 + -0.1 1,894,231 + -1.3 1,894,231 + -0.3 1,894,231 + -0.7 1,894,231 + -1.8 1,894,231 + +1.6 1,894,231 + -0.3 1,894,231 + -0.2 1,894,231 + +0.3 1,894,231 + -0.2 1,894,231 + -2.5 1,894,231 + -0.5 1,894,231 + +0.9 1,894,231 + -0.1 1,894,231 + -0.2 1,894,231 + -2.1 1,894,231 + +1.7 1,894,231 + +0.5 1,894,231 + +1.2 1,894,231 + +0.8 1,894,231 + +0.4 1,894,231 + +0.3 1,894,231 + +0.0 1,894,231 + -0.2 1,894,231 + +0.2 1,894,231 + -0.3 1,894,231 + +0.3 1,894,231 + -0.3 1,894,231 + -0.4 1,894,231 + -0.3 1,894,231 + +0.1 1,894,231 + -0.1 1,894,232 - +0.9 1,894,232 - +0.0 1,894,232 - +0.5 1,894,232 - +0.9 1,894,232 - -0.2 1,894,232 - -0.8 1,894,232 - +1.2 1,894,232 - -0.1 1,894,232 - +0.4 1,894,232 - +0.8 1,894,232 - -0.4 1,894,232 - +0.5 1,894,232 - -0.3 1,894,232 - +0.5 1,894,232 - -0.2 1,894,232 - -0.6 1,894,232 - -0.1 1,894,232 - +0.1 1,894,232 - -1.1 1,894,232 - +1.1 1,894,232 - -0.4 1,894,232 - -0.4 1,894,285 - +1.0 1,894,290 + +0.6 1,894,290 + -1.0 1,894,290 + -0.0 1,894,291 - -0.4 1,894,291 - +2.1 1,894,295 + -0.3 1,894,296 - +0.6 1,894,296 - +0.7 1,894,296 - +1.2 1,894,302 + -0.2 1,894,302 + -0.5 1,894,344 - +0.0 1,894,407 + PFLU_RS08500 0.11 -1.0 1,894,408 - PFLU_RS08500 0.11 -0.4 1,894,614 + PFLU_RS08500 0.42 +1.2 1,894,615 - PFLU_RS08500 0.43 +0.8 1,894,693 + PFLU_RS08500 0.54 +0.1 1,894,693 + PFLU_RS08500 0.54 -1.6 1,894,693 + PFLU_RS08500 0.54 +0.1 1,894,693 + PFLU_RS08500 0.54 +0.0 1,894,693 + PFLU_RS08500 0.54 -0.4 1,894,693 + PFLU_RS08500 0.54 +1.1 1,894,693 + PFLU_RS08500 0.54 -0.0 1,894,693 + PFLU_RS08500 0.54 -0.3 1,894,693 + PFLU_RS08500 0.54 -0.1 1,894,693 + PFLU_RS08500 0.54 -0.0 1,894,693 + PFLU_RS08500 0.54 -1.4 1,894,694 - PFLU_RS08500 0.55 +1.2 1,894,694 - PFLU_RS08500 0.55 -0.3 1,894,694 - PFLU_RS08500 0.55 +0.2 1,894,694 - PFLU_RS08500 0.55 -0.9 1,894,694 - PFLU_RS08500 0.55 -0.5 1,894,694 - PFLU_RS08500 0.55 -1.4 1,894,694 - PFLU_RS08500 0.55 +0.3 1,894,694 - PFLU_RS08500 0.55 +0.3 1,894,694 - PFLU_RS08500 0.55 -1.0 1,894,694 - PFLU_RS08500 0.55 -1.4 1,894,694 - PFLU_RS08500 0.55 -1.6 1,894,695 + PFLU_RS08500 0.55 -0.0 1,894,695 + PFLU_RS08500 0.55 -0.0 1,894,695 + PFLU_RS08500 0.55 +3.0 1,894,695 + PFLU_RS08500 0.55 -0.9 1,894,695 + PFLU_RS08500 0.55 -2.4 1,894,695 + PFLU_RS08500 0.55 -0.1 1,894,695 + PFLU_RS08500 0.55 +1.0 1,894,695 + PFLU_RS08500 0.55 +0.0 1,894,695 + PFLU_RS08500 0.55 +0.3 1,894,695 + PFLU_RS08500 0.55 +0.3 1,894,695 + PFLU_RS08500 0.55 +0.2 1,894,695 + PFLU_RS08500 0.55 +0.0 1,894,695 + PFLU_RS08500 0.55 -1.1 1,894,695 + PFLU_RS08500 0.55 -0.5 1,894,695 + PFLU_RS08500 0.55 +0.2 1,894,695 + PFLU_RS08500 0.55 +0.3 1,894,695 + PFLU_RS08500 0.55 +0.2 1,894,695 + PFLU_RS08500 0.55 +0.1 1,894,695 + PFLU_RS08500 0.55 +0.3 1,894,696 - PFLU_RS08500 0.55 -0.2 1,894,696 - PFLU_RS08500 0.55 +0.7 1,894,696 - PFLU_RS08500 0.55 -0.6 1,894,696 - PFLU_RS08500 0.55 +1.1 1,894,696 - PFLU_RS08500 0.55 +0.1 1,894,696 - PFLU_RS08500 0.55 -0.4 1,894,696 - PFLU_RS08500 0.55 +1.0 1,894,696 - PFLU_RS08500 0.55 +1.5 1,894,696 - PFLU_RS08500 0.55 +0.8 1,894,696 - PFLU_RS08500 0.55 -0.5 1,894,696 - PFLU_RS08500 0.55 -0.5 1,894,696 - PFLU_RS08500 0.55 -0.2 1,894,696 - PFLU_RS08500 0.55 +0.5 1,894,696 - PFLU_RS08500 0.55 -0.7 1,894,696 - PFLU_RS08500 0.55 -0.4 1,894,696 - PFLU_RS08500 0.55 -0.3 1,894,696 - PFLU_RS08500 0.55 +1.4 1,894,806 + PFLU_RS08500 0.72 -0.6 1,894,806 + PFLU_RS08500 0.72 +1.1 1,894,806 + PFLU_RS08500 0.72 -0.5 1,894,806 + PFLU_RS08500 0.72 +0.1 1,894,806 + PFLU_RS08500 0.72 -0.5 1,894,806 + PFLU_RS08500 0.72 +0.3 1,894,807 - PFLU_RS08500 0.72 +0.0 1,894,807 - PFLU_RS08500 0.72 +0.8 1,894,807 - PFLU_RS08500 0.72 +0.5 1,894,807 - PFLU_RS08500 0.72 -0.2 1,894,858 + PFLU_RS08500 0.80 -0.0 1,894,858 + PFLU_RS08500 0.80 -0.5 1,894,858 + PFLU_RS08500 0.80 -0.5 1,894,858 + PFLU_RS08500 0.80 -0.2 1,894,858 + PFLU_RS08500 0.80 -1.3 1,894,859 - PFLU_RS08500 0.80 +0.5 1,894,859 - PFLU_RS08500 0.80 -0.0 1,894,859 - PFLU_RS08500 0.80 -1.0 1,894,859 - PFLU_RS08500 0.80 -0.4 1,894,859 - PFLU_RS08500 0.80 +1.0 1,894,859 - PFLU_RS08500 0.80 -0.8 1,894,859 - PFLU_RS08500 0.80 -0.0 1,894,859 - PFLU_RS08500 0.80 -0.0 1,894,982 + +2.0 1,895,071 + -0.5 1,895,071 + -0.0 1,895,071 + -0.0 1,895,071 + -0.2 1,895,078 + -0.6 1,895,078 + +1.0 1,895,177 + +0.6 1,895,177 + -0.8 1,895,177 + -0.5 1,895,177 + -0.3 1,895,177 + +0.1
Or see this region's nucleotide sequence