Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12860

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
2,901,274	+		PFLU_RS12855	0.45	+1.6
2,901,274	+		PFLU_RS12855	0.45	+0.2
2,901,274	+		PFLU_RS12855	0.45	-1.7
2,901,274	+		PFLU_RS12855	0.45	-1.7
2,901,274	+		PFLU_RS12855	0.45	-0.9
2,901,274	+		PFLU_RS12855	0.45	+1.5
2,901,274	+		PFLU_RS12855	0.45	-0.1
2,901,274	+		PFLU_RS12855	0.45	-0.6
2,901,275	-		PFLU_RS12855	0.45	-1.2
2,901,275	-		PFLU_RS12855	0.45	+0.9
2,901,275	-		PFLU_RS12855	0.45	-0.9
2,901,275	-		PFLU_RS12855	0.45	+0.4
2,901,275	-		PFLU_RS12855	0.45	+0.3
2,901,407	-		PFLU_RS12855	0.53	-0.0
2,901,407	-		PFLU_RS12855	0.53	+0.7
2,901,943	+		PFLU_RS12855	0.87	-0.3
2,901,943	+		PFLU_RS12855	0.87	-0.3
2,901,944	-		PFLU_RS12855	0.88	+1.5
2,902,380	+		PFLU_RS12860	0.22	-0.7
2,902,380	+		PFLU_RS12860	0.22	-1.3
2,902,380	+		PFLU_RS12860	0.22	+0.7
2,902,380	+		PFLU_RS12860	0.22	+0.9
2,902,381	-		PFLU_RS12860	0.22	+1.7
2,902,381	-		PFLU_RS12860	0.22	-0.1
2,902,381	-		PFLU_RS12860	0.22	+1.2
2,902,391	-		PFLU_RS12860	0.23	-0.1
2,902,415	-		PFLU_RS12860	0.26	+0.9
2,902,602	+		PFLU_RS12860	0.44	-0.9
2,902,602	+		PFLU_RS12860	0.44	+2.0
2,902,602	+		PFLU_RS12860	0.44	-1.1
2,902,602	+		PFLU_RS12860	0.44	-0.6
2,902,602	+		PFLU_RS12860	0.44	+0.7
2,902,603	-		PFLU_RS12860	0.44	-0.0
2,902,603	-		PFLU_RS12860	0.44	+0.7
2,902,603	-		PFLU_RS12860	0.44	+0.8
2,902,669	-		PFLU_RS12860	0.50	-1.0
2,902,669	-		PFLU_RS12860	0.50	-0.1
2,902,671	+		PFLU_RS12860	0.51	+0.2
2,902,671	+		PFLU_RS12860	0.51	-2.1
2,902,672	-		PFLU_RS12860	0.51	+0.4
2,902,672	-		PFLU_RS12860	0.51	-0.9
2,902,851	+		PFLU_RS12860	0.68	-0.3
2,902,851	+		PFLU_RS12860	0.68	+1.7
2,902,851	+		PFLU_RS12860	0.68	+1.0
2,902,851	+		PFLU_RS12860	0.68	+0.5
2,902,852	-		PFLU_RS12860	0.68	-0.0
2,902,852	-		PFLU_RS12860	0.68	+1.5
2,902,852	-		PFLU_RS12860	0.68	+0.4
2,902,852	-		PFLU_RS12860	0.68	+0.5
2,902,914	-		PFLU_RS12860	0.74	-0.3
2,902,929	+		PFLU_RS12860	0.76	-0.9
2,902,929	+		PFLU_RS12860	0.76	+0.5
2,902,929	+		PFLU_RS12860	0.76	-0.0
2,902,929	+		PFLU_RS12860	0.76	-0.7
2,902,930	-		PFLU_RS12860	0.76	-0.4
2,902,930	-		PFLU_RS12860	0.76	-1.4
2,902,930	-		PFLU_RS12860	0.76	-0.0
2,902,930	-		PFLU_RS12860	0.76	-0.6
2,902,986	+		PFLU_RS12860	0.81	-1.3
2,903,007	+		PFLU_RS12860	0.83	-0.9
2,903,007	+		PFLU_RS12860	0.83	-0.6
2,903,007	+		PFLU_RS12860	0.83	-1.3
2,903,008	-		PFLU_RS12860	0.84	+0.7
2,903,008	-		PFLU_RS12860	0.84	-1.1
2,903,008	-		PFLU_RS12860	0.84	-1.5
2,903,008	-		PFLU_RS12860	0.84	+0.7
2,903,008	-		PFLU_RS12860	0.84	-2.7
2,903,077	+				-2.3
2,903,167	+				+1.1
2,903,167	+				+0.7
2,903,167	+				+0.9
2,903,168	-				+1.5
2,903,168	-				+1.5
2,903,168	-				-0.0
2,903,168	-				+0.0
2,903,168	-				-1.3
2,903,219	+				-1.3
2,903,219	+				+0.1
2,903,220	-				+0.4
2,903,220	-				-2.3
2,903,220	-				-1.2
2,903,242	+				+0.2
2,903,242	+				-1.6
2,903,242	+				+0.3
2,903,242	+				-1.3
2,903,243	-				+1.3
2,903,262	+				-1.3
2,903,262	+				+0.5
2,903,262	+				+0.1
2,903,262	+				-1.3
2,903,262	+				+0.5
2,903,262	+				+1.0
2,903,263	-				-0.3
2,903,263	-				+0.7
2,903,263	-				+2.3
2,903,268	+				-0.2
2,903,268	+				+1.0
2,903,269	-				-1.3
2,903,318	+		PFLU_RS12865	0.14	-0.4
2,903,318	+		PFLU_RS12865	0.14	-1.3
2,903,451	-		PFLU_RS12865	0.26	-0.0
2,903,498	+		PFLU_RS12865	0.31	+0.2
2,903,499	-		PFLU_RS12865	0.31	-0.3
2,903,499	-		PFLU_RS12865	0.31	-2.5
2,903,499	-		PFLU_RS12865	0.31	+0.3
2,903,499	-		PFLU_RS12865	0.31	+1.3
2,903,499	-		PFLU_RS12865	0.31	-2.1
2,903,509	-		PFLU_RS12865	0.32	-0.0
2,903,603	+		PFLU_RS12865	0.40	+0.7
2,903,604	-		PFLU_RS12865	0.41	-0.1
2,903,604	-		PFLU_RS12865	0.41	+0.7
2,903,677	-		PFLU_RS12865	0.47	-0.2
2,903,677	-		PFLU_RS12865	0.47	-0.6
2,903,677	-		PFLU_RS12865	0.47	-0.3
2,903,770	+		PFLU_RS12865	0.56	+0.7
2,903,770	+		PFLU_RS12865	0.56	-0.7
2,903,770	+		PFLU_RS12865	0.56	-0.0
2,903,770	+		PFLU_RS12865	0.56	-1.6
2,903,770	+		PFLU_RS12865	0.56	+0.1
2,903,770	+		PFLU_RS12865	0.56	+0.9
2,903,770	+		PFLU_RS12865	0.56	-1.1
2,903,771	-		PFLU_RS12865	0.56	-0.5
2,903,771	-		PFLU_RS12865	0.56	+0.2
2,903,831	+		PFLU_RS12865	0.62	-0.6
2,903,831	+		PFLU_RS12865	0.62	-0.5
2,903,831	+		PFLU_RS12865	0.62	-0.7
2,903,831	+		PFLU_RS12865	0.62	-2.0
2,903,831	+		PFLU_RS12865	0.62	-0.3
2,903,832	-		PFLU_RS12865	0.62	+0.5
2,903,832	-		PFLU_RS12865	0.62	+0.6
2,903,832	-		PFLU_RS12865	0.62	-0.7
2,903,832	-		PFLU_RS12865	0.62	+1.7
2,903,832	-		PFLU_RS12865	0.62	+0.1
2,903,945	+		PFLU_RS12865	0.73	+0.3
2,903,945	+		PFLU_RS12865	0.73	+1.5
2,903,945	+		PFLU_RS12865	0.73	+0.7
2,903,945	+		PFLU_RS12865	0.73	-0.3
2,903,945	+		PFLU_RS12865	0.73	-1.3
2,903,945	+		PFLU_RS12865	0.73	-1.2
2,903,945	+		PFLU_RS12865	0.73	+0.7
2,903,946	-		PFLU_RS12865	0.73	+0.1
2,903,946	-		PFLU_RS12865	0.73	+0.4
2,903,946	-		PFLU_RS12865	0.73	+0.5
2,903,946	-		PFLU_RS12865	0.73	+0.4
2,903,946	-		PFLU_RS12865	0.73	-0.3
2,903,946	-		PFLU_RS12865	0.73	+1.1
2,903,997	-		PFLU_RS12865	0.78	+0.3