Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS31010

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
4,740,271	-		PFLU_RS21095	0.52	-0.2
4,740,293	+		PFLU_RS21095	0.56	-0.6
4,740,293	+		PFLU_RS21095	0.56	+0.7
4,740,293	+		PFLU_RS21095	0.56	+0.9
4,740,294	-		PFLU_RS21095	0.56	-1.1
4,740,294	-		PFLU_RS21095	0.56	-1.0
4,740,294	-		PFLU_RS21095	0.56	+1.5
4,740,295	+		PFLU_RS21095	0.56	+0.9
4,740,295	+		PFLU_RS21095	0.56	+0.9
4,740,295	+		PFLU_RS21095	0.56	+0.5
4,740,295	+		PFLU_RS21095	0.56	+1.5
4,740,295	+		PFLU_RS21095	0.56	-1.4
4,740,295	+		PFLU_RS21095	0.56	-0.4
4,740,295	+		PFLU_RS21095	0.56	+0.6
4,740,296	-		PFLU_RS21095	0.56	+0.2
4,740,296	-		PFLU_RS21095	0.56	+0.3
4,740,296	-		PFLU_RS21095	0.56	+0.2
4,740,296	-		PFLU_RS21095	0.56	+0.4
4,740,296	-		PFLU_RS21095	0.56	-0.3
4,740,296	-		PFLU_RS21095	0.56	-0.6
4,740,296	-		PFLU_RS21095	0.56	+1.2
4,740,323	-		PFLU_RS21095	0.61	-0.5
4,740,364	+		PFLU_RS21095	0.69	+0.3
4,740,364	+		PFLU_RS21095	0.69	+0.4
4,740,365	-		PFLU_RS21095	0.69	-0.5
4,740,367	+		PFLU_RS21095	0.69	+0.3
4,740,367	+		PFLU_RS21095	0.69	-0.0
4,740,367	+		PFLU_RS21095	0.69	+1.6
4,740,367	+		PFLU_RS21095	0.69	-1.7
4,740,367	+		PFLU_RS21095	0.69	+0.8
4,740,367	+		PFLU_RS21095	0.69	+0.2
4,740,367	+		PFLU_RS21095	0.69	+0.2
4,740,367	+		PFLU_RS21095	0.69	-1.0
4,740,367	+		PFLU_RS21095	0.69	+0.0
4,740,368	-		PFLU_RS21095	0.69	+0.6
4,740,368	-		PFLU_RS21095	0.69	+0.3
4,740,368	-		PFLU_RS21095	0.69	-0.8
4,740,368	-		PFLU_RS21095	0.69	+0.2
4,740,368	-		PFLU_RS21095	0.69	-1.1
4,740,368	-		PFLU_RS21095	0.69	+0.6
4,740,368	-		PFLU_RS21095	0.69	+0.1
4,740,368	-		PFLU_RS21095	0.69	+0.7
4,740,403	+		PFLU_RS21095	0.76	+1.2
4,740,403	+		PFLU_RS21095	0.76	+1.0
4,740,403	+		PFLU_RS21095	0.76	-0.6
4,740,403	+		PFLU_RS21095	0.76	-1.5
4,740,403	+		PFLU_RS21095	0.76	-0.7
4,740,403	+		PFLU_RS21095	0.76	-0.6
4,740,403	+		PFLU_RS21095	0.76	-0.0
4,740,403	+		PFLU_RS21095	0.76	+0.8
4,740,403	+		PFLU_RS21095	0.76	-0.2
4,740,403	+		PFLU_RS21095	0.76	-1.2
4,740,404	-		PFLU_RS21095	0.76	+0.4
4,740,404	-		PFLU_RS21095	0.76	-0.3
4,740,404	-		PFLU_RS21095	0.76	+0.2
4,740,404	-		PFLU_RS21095	0.76	+0.4
4,740,404	-		PFLU_RS21095	0.76	-1.8
4,740,404	-		PFLU_RS21095	0.76	+0.0
4,740,440	+		PFLU_RS21095	0.83	-0.9
4,740,440	+		PFLU_RS21095	0.83	-1.3
4,740,441	-		PFLU_RS21095	0.83	-0.1
4,740,441	-		PFLU_RS21095	0.83	-1.0
4,740,441	-		PFLU_RS21095	0.83	-0.3
4,740,496	-				+0.2
4,740,508	+				-0.1
4,740,508	+				-0.4
4,740,509	-				-1.0
4,740,509	-				-0.1
4,740,509	-				+0.0
4,740,555	+				+0.5
4,740,555	+				+0.6
4,740,555	+				+2.0
4,740,555	+				+0.0
4,740,555	+				-0.2
4,740,555	+				+0.7
4,740,555	+				-0.2
4,740,555	+				+0.0
4,740,555	+				-0.2
4,740,555	+				-0.4
4,740,556	-				+1.0
4,740,556	-				+0.2
4,740,556	-				+0.2
4,740,556	-				-0.4
4,740,556	-				-0.3
4,740,556	-				+0.5
4,740,556	-				+0.1
4,740,577	+				+1.2
4,740,577	+				-1.3
4,740,577	+				+0.2
4,740,578	-				+0.2
4,740,578	-				-0.3
4,740,578	-				+0.2
4,740,630	-				+0.0
4,740,630	-				+0.5
4,740,669	+				+0.3
4,740,715	-				+0.8
4,740,737	-				-1.3
4,740,819	+				+0.9
4,740,820	-				-0.6
4,740,820	-				+1.1
4,740,820	-				+0.2
4,740,820	-				-0.8
4,740,828	-				-0.1
4,740,871	+				-0.3
4,740,871	+				+0.4
4,740,871	+				-0.1
4,740,871	+				+1.0
4,740,872	-				-2.0
4,740,872	-				+0.2
4,740,872	-				-0.3
4,740,929	+				+0.7
4,740,929	+				-0.4
4,740,929	+				+0.5
4,740,929	+				+0.9
4,740,930	-				-0.5
4,740,940	+				+0.4
4,740,940	+				-0.4
4,740,940	+				+0.9
4,740,941	-				+0.9
4,740,941	-				+2.0
4,740,942	+				-0.2
4,740,943	-				-2.0
4,740,943	-				+0.8
4,740,943	-				+2.2
4,740,979	+				-0.3
4,740,980	-				+1.3
4,741,039	+				-0.3
4,741,074	+				-0.3
4,741,104	+		PFLU_RS31005	0.22	-0.6
4,741,104	+		PFLU_RS31005	0.22	-0.3
4,741,105	-		PFLU_RS31005	0.22	+0.7
4,741,117	+		PFLU_RS31005	0.27	+1.2
4,741,118	-		PFLU_RS31005	0.28	+0.9
4,741,118	-		PFLU_RS31005	0.28	+0.2
4,741,118	-		PFLU_RS31005	0.28	+0.6
4,741,118	-		PFLU_RS31005	0.28	+2.5
4,741,162	+		PFLU_RS31005	0.46	-1.3
4,741,162	+		PFLU_RS31005	0.46	-0.2
4,741,162	+		PFLU_RS31005	0.46	-0.6
4,741,163	-		PFLU_RS31005	0.46	+0.9
4,741,198	+		PFLU_RS31005	0.61	+0.2
4,741,199	-		PFLU_RS31005	0.61	+1.4
4,741,199	-		PFLU_RS31005	0.61	-1.3
4,741,199	-		PFLU_RS31005	0.61	+1.2
4,741,199	-		PFLU_RS31005	0.61	-0.8
4,741,199	-		PFLU_RS31005	0.61	-1.2
4,741,238	+				+1.6
4,741,238	+				-0.7
4,741,239	-				+0.8
4,741,266	+				+0.2
4,741,282	+				+0.2
4,741,282	+				-2.0
4,741,282	+				+2.2
4,741,283	-				+0.0
4,741,284	+				-0.5
4,741,284	+				-1.8
4,741,285	-				-1.5
4,741,285	-				-1.8
4,741,285	-				-1.0
4,741,285	-				+0.2
4,741,285	-				-0.6
4,741,368	+		PFLU_RS31010	0.52	+0.8
4,741,416	-		PFLU_RS31010	0.68	-0.5
4,741,416	-		PFLU_RS31010	0.68	+1.0
4,741,492	-				-2.5
4,741,510	+				-0.4
4,741,510	+				-0.9
4,741,510	+				-0.4
4,741,510	+				-1.3
4,741,510	+				-1.4
4,741,510	+				-0.8
4,741,511	-				-0.4
4,741,511	-				+0.9
4,741,511	-				+1.2
4,741,511	-				-1.0
4,741,511	-				+0.7
4,741,511	-				+0.5
4,741,511	-				-1.1
4,741,511	-				-1.2
4,741,511	-				-0.1
4,741,574	+				+0.6
4,741,575	-				+0.8
4,741,575	-				+0.8
4,741,575	-				+0.6
4,741,575	-				+1.2
4,741,632	+				+0.4
4,741,632	+				+0.0
4,741,632	+				-0.4
4,741,633	-				+1.2
4,741,635	-				-0.0
4,741,639	+				-0.4
4,741,639	+				-0.8
4,741,640	-				-0.0
4,741,647	+				-2.2
4,741,648	-				-1.5
4,741,650	+				-1.3
4,741,650	+				+0.0
4,741,650	+				-0.3
4,741,650	+				+0.8
4,741,650	+				+0.7
4,741,650	+				-1.3
4,741,650	+				+0.6
4,741,651	-				+2.5
4,741,651	-				+0.3
4,741,651	-				+1.4
4,741,653	+				-0.2
4,741,654	-				+0.1
4,741,683	+				+1.6
4,741,683	+				+0.2
4,741,684	-				-0.4
4,741,695	+				+1.6
4,741,767	-				-0.6
4,741,790	-				+0.6
4,741,802	+				+0.9
4,741,802	+				-0.8
4,741,802	+				+1.2
4,741,802	+				-0.2
4,741,803	-				-1.4
4,741,803	-				-0.8
4,741,814	+				+1.2
4,741,814	+				+0.2
4,741,814	+				+2.7
4,741,815	-				+0.2
4,741,815	-				+0.6
4,741,831	+				+0.7
4,741,831	+				+0.7
4,741,831	+				-0.3
4,741,832	-				+0.3
4,741,832	-				-1.5
4,741,834	+				+1.3
4,741,834	+				-1.1
4,741,834	+				-1.8
4,741,834	+				+1.2
4,741,834	+				+0.2
4,741,834	+				-0.5
4,741,834	+				-2.5
4,741,835	-				-0.2
4,741,835	-				-1.0
4,741,835	-				-1.7
4,741,835	-				-0.6
4,741,835	-				-1.3
4,741,835	-				-1.7
4,741,835	-				-1.3
4,741,835	-				+1.4
4,741,835	-				-1.4
4,741,835	-				+1.2
4,741,835	-				+0.7
4,741,835	-				+2.7
4,741,868	-				+1.2
4,741,909	+				+0.6
4,741,909	+				+0.3
4,741,909	+				-0.8
4,741,909	+				+1.4
4,741,909	+				-0.3
4,741,909	+				-0.2
4,741,909	+				+0.7
4,741,910	-				+0.5
4,741,910	-				-0.9
4,741,910	-				-0.1
4,741,910	-				-0.3
4,741,910	-				-0.5
4,741,972	-				-0.4
4,741,999	-				+0.2
4,742,029	+				-0.2
4,742,030	-				+0.7
4,742,030	-				+0.6
4,742,036	+				+0.6
4,742,037	-				-0.7
4,742,037	-				+0.8
4,742,054	+				-1.0
4,742,054	+				+1.0