Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS30770

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
2,882,938	+		PFLU_RS12775	0.40	-0.9
2,882,938	+		PFLU_RS12775	0.40	+0.3
2,882,938	+		PFLU_RS12775	0.40	-0.3
2,882,939	-		PFLU_RS12775	0.40	-0.8
2,882,952	-		PFLU_RS12775	0.41	+0.9
2,882,952	-		PFLU_RS12775	0.41	-0.8
2,882,952	-		PFLU_RS12775	0.41	+0.9
2,882,957	+		PFLU_RS12775	0.41	-0.0
2,882,958	-		PFLU_RS12775	0.41	+0.5
2,882,958	-		PFLU_RS12775	0.41	-0.7
2,883,292	+		PFLU_RS12775	0.62	-0.6
2,883,292	+		PFLU_RS12775	0.62	-1.9
2,883,292	+		PFLU_RS12775	0.62	-0.3
2,883,293	-		PFLU_RS12775	0.62	-0.7
2,883,293	-		PFLU_RS12775	0.62	-0.6
2,883,401	+		PFLU_RS12775	0.69	+0.3
2,883,401	+		PFLU_RS12775	0.69	+0.3
2,883,401	+		PFLU_RS12775	0.69	+2.2
2,883,402	-		PFLU_RS12775	0.69	-0.3
2,883,402	-		PFLU_RS12775	0.69	+0.3
2,883,402	-		PFLU_RS12775	0.69	+0.6
2,883,402	-		PFLU_RS12775	0.69	+1.2
2,883,402	-		PFLU_RS12775	0.69	+0.3
2,883,676	+		PFLU_RS12775	0.87	+0.1
2,883,874	+				-0.7
2,883,875	-				-2.3
2,883,885	+				+0.1
2,883,885	+				+0.5
2,883,885	+				-0.4
2,883,886	-				-0.1
2,883,886	-				-0.5
2,883,983	+		PFLU_RS30770	0.35	+0.1
2,883,983	+		PFLU_RS30770	0.35	-2.0
2,884,016	+		PFLU_RS30770	0.45	+0.4
2,884,049	-		PFLU_RS30770	0.55	+1.6
2,884,156	+		PFLU_RS30770	0.87	+0.9
2,884,156	+		PFLU_RS30770	0.87	+0.6
2,884,156	+		PFLU_RS30770	0.87	+1.7
2,884,157	-		PFLU_RS30770	0.88	+0.2
2,884,235	+				-0.5
2,884,235	+				-1.5
2,884,235	+				-1.3
2,884,245	+				+0.4
2,884,259	-				-1.1
2,884,259	-				-0.5
2,884,259	-				+0.3
2,884,334	+		PFLU_RS12780	0.26	-0.5
2,884,334	+		PFLU_RS12780	0.26	+0.1
2,884,334	+		PFLU_RS12780	0.26	+0.9
2,884,335	-		PFLU_RS12780	0.26	+0.4
2,884,394	+		PFLU_RS12780	0.50	+0.5
2,884,394	+		PFLU_RS12780	0.50	+0.6
2,884,394	+		PFLU_RS12780	0.50	+0.3
2,884,394	+		PFLU_RS12780	0.50	+1.1
2,884,394	+		PFLU_RS12780	0.50	-1.0
2,884,394	+		PFLU_RS12780	0.50	-0.9
2,884,394	+		PFLU_RS12780	0.50	+0.7
2,884,394	+		PFLU_RS12780	0.50	+1.9
2,884,394	+		PFLU_RS12780	0.50	+2.2
2,884,394	+		PFLU_RS12780	0.50	+0.9
2,884,394	+		PFLU_RS12780	0.50	-0.1
2,884,394	+		PFLU_RS12780	0.50	-1.0
2,884,394	+		PFLU_RS12780	0.50	+0.6
2,884,394	+		PFLU_RS12780	0.50	+1.1
2,884,394	+		PFLU_RS12780	0.50	+0.6
2,884,395	-		PFLU_RS12780	0.50	-0.7
2,884,395	-		PFLU_RS12780	0.50	-0.7
2,884,395	-		PFLU_RS12780	0.50	+2.0
2,884,395	-		PFLU_RS12780	0.50	-1.1
2,884,395	-		PFLU_RS12780	0.50	+0.1
2,884,395	-		PFLU_RS12780	0.50	+0.0
2,884,395	-		PFLU_RS12780	0.50	+0.3
2,884,395	-		PFLU_RS12780	0.50	-0.5
2,884,395	-		PFLU_RS12780	0.50	+0.1
2,884,395	-		PFLU_RS12780	0.50	+0.6
2,884,556	+				+3.2
2,884,665	+				-0.0
2,884,712	+				-0.1
2,884,713	-				-0.0
2,884,875	+				-0.1
2,884,923	-				+1.3
2,884,923	-				-0.3
2,884,923	-				-0.6
2,884,993	-		PFLU_RS12785	0.17	+0.9
2,884,993	-		PFLU_RS12785	0.17	+0.5
2,885,046	+		PFLU_RS12785	0.23	-0.5