Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29810

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
6,624,119	-				+0.4
6,624,119	-				-0.5
6,624,119	-				-0.5
6,624,119	-				+0.5
6,624,119	-				-1.1
6,624,119	-				+0.8
6,624,125	+				-0.1
6,624,125	+				-0.2
6,624,125	+				+1.6
6,624,125	+				-0.1
6,624,126	-				-0.7
6,624,128	+				+0.2
6,624,128	+				+0.2
6,624,128	+				+1.3
6,624,128	+				-0.9
6,624,128	+				+0.8
6,624,128	+				-0.4
6,624,128	+				+0.1
6,624,128	+				-0.7
6,624,129	-				+1.9
6,624,129	-				+0.3
6,624,129	-				+0.5
6,624,129	-				-1.0
6,624,129	-				+0.3
6,624,129	-				+1.0
6,624,129	-				-1.0
6,624,129	-				-1.1
6,624,129	-				-0.5
6,624,137	+				-0.6
6,624,137	+				+0.4
6,624,138	-				+0.2
6,624,138	-				-0.5
6,624,138	-				-0.2
6,624,187	+				-1.8
6,624,187	+				-0.3
6,624,195	+				-0.9
6,624,195	+				+0.9
6,624,195	+				-1.4
6,624,196	-				-1.6
6,624,196	-				-0.5
6,624,196	-				+0.6
6,624,196	-				+0.1
6,624,255	+				-0.5
6,624,255	+				+0.1
6,624,255	+				+0.2
6,624,255	+				+0.3
6,624,255	+				+0.3
6,624,267	-				-0.3
6,624,267	-				-0.9
6,624,267	-				+0.5
6,624,267	-				+0.6
6,624,267	-				-0.5
6,624,267	-				-1.8
6,624,267	-				-0.3
6,624,267	-				-0.8
6,624,267	-				+0.2
6,624,267	-				+0.0
6,624,267	-				-1.4
6,624,267	-				+0.6
6,624,267	-				+0.2
6,624,267	-				+0.6
6,624,267	-				-0.1
6,624,267	-				+0.4
6,624,267	-				-0.7
6,624,267	-				-0.2
6,624,267	-				+0.3
6,624,267	-				-1.2
6,624,267	-				+1.0
6,624,267	-				-0.2
6,624,280	-				-0.4
6,624,280	-				-1.4
6,624,280	-				-0.7
6,624,280	-				-0.9
6,624,280	-				-0.5
6,624,280	-				+1.2
6,624,280	-				-0.5
6,624,280	-				+0.3
6,624,377	+				-0.2
6,624,377	+				+1.3
6,624,377	+				+0.7
6,624,377	+				+0.3
6,624,377	+				+0.1
6,624,377	+				+0.6
6,624,377	+				+0.2
6,624,377	+				+0.3
6,624,377	+				+0.8
6,624,377	+				+0.7
6,624,378	-				+0.5
6,624,378	-				+0.2
6,624,378	-				+1.3
6,624,378	-				+0.4
6,624,378	-				+1.0
6,624,378	-				-0.7
6,624,378	-				+1.0
6,624,378	-				-0.8
6,624,378	-				+0.8
6,624,378	-				+0.4
6,624,378	-				+0.6
6,624,378	-				-0.4
6,624,378	-				+0.8
6,624,378	-				-0.3
6,624,378	-				+2.5
6,624,408	+				-0.2
6,624,408	+				-0.1
6,624,409	-				+0.9
6,624,409	-				-1.4
6,624,409	-				-0.9
6,624,409	-				-0.9
6,624,409	-				+1.3
6,624,409	-				-0.1
6,624,545	-		PFLU_RS29810	0.24	+1.1
6,624,574	+		PFLU_RS29810	0.27	+0.1
6,624,574	+		PFLU_RS29810	0.27	-0.0
6,624,602	+		PFLU_RS29810	0.30	+0.2
6,624,602	+		PFLU_RS29810	0.30	-0.4
6,624,602	+		PFLU_RS29810	0.30	+1.1
6,624,602	+		PFLU_RS29810	0.30	+0.6
6,624,603	-		PFLU_RS29810	0.30	+0.3
6,624,603	-		PFLU_RS29810	0.30	+0.4
6,624,603	-		PFLU_RS29810	0.30	-0.3
6,624,603	-		PFLU_RS29810	0.30	+0.3
6,624,603	-		PFLU_RS29810	0.30	+0.8
6,624,603	-		PFLU_RS29810	0.30	+0.8
6,624,603	-		PFLU_RS29810	0.30	+1.4
6,624,603	-		PFLU_RS29810	0.30	-0.2
6,624,603	-		PFLU_RS29810	0.30	+1.2
6,624,603	-		PFLU_RS29810	0.30	-0.0
6,624,603	-		PFLU_RS29810	0.30	-1.3
6,624,639	+		PFLU_RS29810	0.34	-0.3
6,624,640	-		PFLU_RS29810	0.34	+0.7
6,624,640	-		PFLU_RS29810	0.34	-0.5
6,624,640	-		PFLU_RS29810	0.34	+1.3
6,624,640	-		PFLU_RS29810	0.34	+1.2
6,624,640	-		PFLU_RS29810	0.34	+0.6
6,624,640	-		PFLU_RS29810	0.34	+0.1
6,624,688	+		PFLU_RS29810	0.39	+0.6
6,624,689	-		PFLU_RS29810	0.40	+0.3
6,624,789	+		PFLU_RS29810	0.51	+0.3
6,624,789	+		PFLU_RS29810	0.51	+1.9
6,624,789	+		PFLU_RS29810	0.51	+1.1
6,624,789	+		PFLU_RS29810	0.51	+0.1
6,624,790	-		PFLU_RS29810	0.51	-0.6
6,624,790	-		PFLU_RS29810	0.51	+0.5
6,625,037	+		PFLU_RS29810	0.78	+1.0
6,625,037	+		PFLU_RS29810	0.78	+1.1
6,625,038	-		PFLU_RS29810	0.78	+0.2
6,625,076	-		PFLU_RS29810	0.82	-0.1
6,625,126	+		PFLU_RS29810	0.88	-0.8
6,625,127	-		PFLU_RS29810	0.88	+1.0
6,625,127	-		PFLU_RS29810	0.88	-0.7
6,625,287	+				-1.0
6,625,287	+				+0.4
6,625,287	+				+0.8
6,625,287	+				-1.4
6,625,287	+				+0.2
6,625,287	+				-1.1
6,625,287	+				+0.6
6,625,288	-				+0.6
6,625,288	-				+0.3
6,625,288	-				-0.8
6,625,466	+				-0.1
6,625,475	+				-0.8
6,625,489	+				+0.2
6,625,489	+				+0.5
6,625,489	+				+1.9
6,625,489	+				-0.1
6,625,490	-				-0.9
6,625,490	-				-0.4
6,625,490	-				+1.1
6,625,490	-				+0.6
6,625,490	-				-0.1
6,625,490	-				+0.5
6,625,490	-				-0.1
6,625,490	-				+0.1
6,625,490	-				-0.2
6,625,490	-				+0.2
6,625,490	-				+0.4
6,625,492	+				-0.7
6,625,492	+				-0.5
6,625,492	+				-0.6
6,625,493	-				+0.1
6,625,493	-				+0.2
6,625,493	-				+0.2
6,625,521	+				+0.4
6,625,522	-				-1.4
6,625,807	+		PFLU_RS29815	0.27	+1.6
6,625,807	+		PFLU_RS29815	0.27	-0.2
6,625,807	+		PFLU_RS29815	0.27	-0.1
6,625,813	+		PFLU_RS29815	0.28	-2.7
6,625,813	+		PFLU_RS29815	0.28	+1.1
6,625,813	+		PFLU_RS29815	0.28	+0.1
6,625,814	-		PFLU_RS29815	0.28	-1.4
6,625,814	-		PFLU_RS29815	0.28	-0.2
6,625,865	-		PFLU_RS29815	0.31	+1.1
6,625,973	+		PFLU_RS29815	0.39	-0.1
6,625,973	+		PFLU_RS29815	0.39	-1.0
6,626,114	+		PFLU_RS29815	0.49	+0.2