Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28325

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
6,308,486	+				+0.6
6,308,488	+				+1.6
6,308,549	+		PFLU_RS28320	0.12	+0.6
6,308,549	+		PFLU_RS28320	0.12	-0.2
6,308,549	+		PFLU_RS28320	0.12	-0.4
6,308,549	+		PFLU_RS28320	0.12	+0.6
6,308,549	+		PFLU_RS28320	0.12	+0.6
6,308,549	+		PFLU_RS28320	0.12	+0.6
6,308,549	+		PFLU_RS28320	0.12	+1.6
6,308,549	+		PFLU_RS28320	0.12	+1.6
6,308,550	-		PFLU_RS28320	0.12	-0.7
6,308,550	-		PFLU_RS28320	0.12	+0.0
6,308,550	-		PFLU_RS28320	0.12	-0.7
6,308,550	-		PFLU_RS28320	0.12	+2.2
6,308,551	+		PFLU_RS28320	0.12	+0.0
6,308,551	+		PFLU_RS28320	0.12	+0.0
6,308,552	-		PFLU_RS28320	0.12	+0.6
6,308,552	-		PFLU_RS28320	0.12	+1.6
6,308,552	-		PFLU_RS28320	0.12	+1.6
6,308,552	-		PFLU_RS28320	0.12	+0.6
6,308,738	+		PFLU_RS28320	0.31	+0.6
6,309,039	-		PFLU_RS28320	0.63	+1.6
6,309,101	+		PFLU_RS28320	0.69	+1.6
6,309,378	+				-0.4
6,309,378	+				-0.7
6,309,378	+				+0.2
6,309,378	+				+0.1
6,309,379	-				-1.6
6,309,379	-				-0.7
6,309,379	-				+0.4
6,309,379	-				-0.9
6,309,379	-				+2.3
6,309,394	+				+1.1
6,309,394	+				-0.1
6,309,394	+				-0.9
6,309,394	+				+0.9
6,309,394	+				-0.1
6,309,394	+				+0.1
6,309,394	+				-0.2
6,309,394	+				-0.3
6,309,394	+				+0.3
6,309,394	+				+0.9
6,309,394	+				+1.7
6,309,394	+				-0.3
6,309,394	+				-0.2
6,309,394	+				+0.1
6,309,394	+				+0.6
6,309,394	+				-0.1
6,309,394	+				+0.7
6,309,394	+				-0.1
6,309,394	+				-0.3
6,309,394	+				-0.3
6,309,394	+				+0.4
6,309,394	+				-2.7
6,309,394	+				+0.2
6,309,395	-				-1.3
6,309,395	-				-1.0
6,309,395	-				+1.0
6,309,395	-				-0.3
6,309,395	-				-0.4
6,309,395	-				+1.0
6,309,395	-				+0.5
6,309,395	-				+0.8
6,309,395	-				-0.1
6,309,395	-				+0.0
6,309,395	-				-0.6
6,309,395	-				+1.0
6,309,395	-				+0.2
6,309,395	-				+1.4
6,309,395	-				-1.2
6,309,395	-				+2.3
6,309,395	-				-0.4
6,309,425	+				-0.4
6,309,780	+		PFLU_RS28325	0.34	+1.0
6,309,781	-		PFLU_RS28325	0.34	-1.3
6,310,028	-		PFLU_RS28325	0.62	-0.7
6,310,028	-		PFLU_RS28325	0.62	-0.2
6,310,028	-		PFLU_RS28325	0.62	+2.3
6,310,072	+		PFLU_RS28325	0.67	-0.4
6,310,072	+		PFLU_RS28325	0.67	+0.4
6,310,072	+		PFLU_RS28325	0.67	-1.0
6,310,072	+		PFLU_RS28325	0.67	-0.7
6,310,072	+		PFLU_RS28325	0.67	-1.7
6,310,072	+		PFLU_RS28325	0.67	+2.2
6,310,072	+		PFLU_RS28325	0.67	+0.0
6,310,072	+		PFLU_RS28325	0.67	+1.2
6,310,073	-		PFLU_RS28325	0.67	+0.9
6,310,073	-		PFLU_RS28325	0.67	+0.0
6,310,073	-		PFLU_RS28325	0.67	-0.1
6,310,073	-		PFLU_RS28325	0.67	-0.7
6,310,073	-		PFLU_RS28325	0.67	+2.4
6,310,074	+		PFLU_RS28325	0.67	+0.6
6,310,075	-		PFLU_RS28325	0.67	+1.6
6,310,075	-		PFLU_RS28325	0.67	+0.0
6,310,075	-		PFLU_RS28325	0.67	-1.2
6,310,150	+		PFLU_RS28325	0.75	+0.6
6,310,150	+		PFLU_RS28325	0.75	+0.6
6,310,151	-		PFLU_RS28325	0.75	+0.6
6,310,167	-		PFLU_RS28325	0.77	+1.0
6,310,196	+		PFLU_RS28325	0.80	+0.0
6,310,196	+		PFLU_RS28325	0.80	+1.8
6,310,196	+		PFLU_RS28325	0.80	+1.6
6,310,196	+		PFLU_RS28325	0.80	+1.0
6,310,196	+		PFLU_RS28325	0.80	+1.6
6,310,196	+		PFLU_RS28325	0.80	+1.0
6,310,196	+		PFLU_RS28325	0.80	+1.0
6,310,196	+		PFLU_RS28325	0.80	+0.7
6,310,196	+		PFLU_RS28325	0.80	+2.6
6,310,196	+		PFLU_RS28325	0.80	+0.0
6,310,196	+		PFLU_RS28325	0.80	-0.4
6,310,196	+		PFLU_RS28325	0.80	+1.2
6,310,196	+		PFLU_RS28325	0.80	+1.6
6,310,196	+		PFLU_RS28325	0.80	+0.6
6,310,196	+		PFLU_RS28325	0.80	+1.1
6,310,197	-		PFLU_RS28325	0.80	+1.0
6,310,197	-		PFLU_RS28325	0.80	+1.6
6,310,197	-		PFLU_RS28325	0.80	+3.9
6,310,197	-		PFLU_RS28325	0.80	+1.6
6,310,197	-		PFLU_RS28325	0.80	+1.6
6,310,197	-		PFLU_RS28325	0.80	+1.9
6,310,197	-		PFLU_RS28325	0.80	+0.6
6,310,197	-		PFLU_RS28325	0.80	+0.6
6,310,198	+		PFLU_RS28325	0.80	+2.2
6,310,198	+		PFLU_RS28325	0.80	+0.3
6,310,198	+		PFLU_RS28325	0.80	+0.6
6,310,198	+		PFLU_RS28325	0.80	+2.9
6,310,198	+		PFLU_RS28325	0.80	+2.0
6,310,198	+		PFLU_RS28325	0.80	-0.4
6,310,198	+		PFLU_RS28325	0.80	+0.0
6,310,198	+		PFLU_RS28325	0.80	+0.2
6,310,198	+		PFLU_RS28325	0.80	-1.2
6,310,198	+		PFLU_RS28325	0.80	+2.6
6,310,199	-		PFLU_RS28325	0.81	-1.1
6,310,199	-		PFLU_RS28325	0.81	+1.6
6,310,199	-		PFLU_RS28325	0.81	+0.3
6,310,199	-		PFLU_RS28325	0.81	+0.0
6,310,199	-		PFLU_RS28325	0.81	-0.4
6,310,199	-		PFLU_RS28325	0.81	-0.4
6,310,199	-		PFLU_RS28325	0.81	+1.6
6,310,199	-		PFLU_RS28325	0.81	+1.0
6,310,199	-		PFLU_RS28325	0.81	-0.4
6,310,199	-		PFLU_RS28325	0.81	+1.6
6,310,199	-		PFLU_RS28325	0.81	+3.6
6,310,199	-		PFLU_RS28325	0.81	+1.6
6,310,199	-		PFLU_RS28325	0.81	+1.8
6,310,199	-		PFLU_RS28325	0.81	-0.4
6,310,199	-		PFLU_RS28325	0.81	-0.4
6,310,388	+				+0.1
6,310,388	+				-1.2
6,310,388	+				+1.6
6,310,389	-				+2.0
6,310,389	-				+0.4
6,310,389	-				+0.6
6,310,389	-				+0.5
6,310,506	+				-0.4
6,310,506	+				+0.4
6,310,506	+				-0.4
6,310,507	-				-0.2
6,310,507	-				+0.3
6,310,507	-				+0.7
6,310,507	-				+1.7
6,310,507	-				+1.0
6,310,549	+				-2.1
6,310,578	+				-0.8
6,310,578	+				-2.0
6,310,578	+				+2.2
6,310,578	+				-0.8
6,310,578	+				+0.1
6,310,613	+				-0.7
6,310,614	-		PFLU_RS28330	0.10	+0.0
6,310,647	+		PFLU_RS28330	0.16	+0.0
6,310,647	+		PFLU_RS28330	0.16	-0.2
6,310,647	+		PFLU_RS28330	0.16	-0.3
6,310,647	+		PFLU_RS28330	0.16	-0.9
6,310,647	+		PFLU_RS28330	0.16	-1.5
6,310,647	+		PFLU_RS28330	0.16	+0.3
6,310,647	+		PFLU_RS28330	0.16	+0.2
6,310,647	+		PFLU_RS28330	0.16	+0.8
6,310,647	+		PFLU_RS28330	0.16	+0.5
6,310,647	+		PFLU_RS28330	0.16	+1.6
6,310,647	+		PFLU_RS28330	0.16	-0.1
6,310,647	+		PFLU_RS28330	0.16	-1.3
6,310,647	+		PFLU_RS28330	0.16	-0.4
6,310,647	+		PFLU_RS28330	0.16	-0.1
6,310,782	+		PFLU_RS28330	0.39	+0.9
6,310,782	+		PFLU_RS28330	0.39	-0.1
6,310,782	+		PFLU_RS28330	0.39	+1.2
6,310,782	+		PFLU_RS28330	0.39	-0.6
6,310,782	+		PFLU_RS28330	0.39	-0.1
6,310,897	+		PFLU_RS28330	0.60	+0.2
6,310,897	+		PFLU_RS28330	0.60	-0.7
6,310,897	+		PFLU_RS28330	0.60	-0.7
6,310,897	+		PFLU_RS28330	0.60	+1.6
6,310,897	+		PFLU_RS28330	0.60	+0.7
6,310,898	-		PFLU_RS28330	0.60	-1.6
6,310,898	-		PFLU_RS28330	0.60	+0.1
6,310,898	-		PFLU_RS28330	0.60	+0.2
6,310,898	-		PFLU_RS28330	0.60	+0.0
6,310,898	-		PFLU_RS28330	0.60	+0.4
6,310,898	-		PFLU_RS28330	0.60	+0.4
6,311,139	+				+0.8
6,311,139	+				+0.1
6,311,139	+				-1.3
6,311,139	+				+0.4
6,311,139	+				+0.2
6,311,140	-				+0.6
6,311,140	-				+1.6
6,311,140	-				-0.4