Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28265

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
6,289,929	+		PFLU_RS28255	0.79	+0.1
6,289,930	-		PFLU_RS28255	0.79	+0.6
6,289,974	+		PFLU_RS28255	0.85	-1.7
6,289,974	+		PFLU_RS28255	0.85	-0.6
6,289,975	-		PFLU_RS28255	0.85	+1.2
6,289,975	-		PFLU_RS28255	0.85	+0.2
6,290,104	+				+0.3
6,290,104	+				+0.4
6,290,104	+				+0.8
6,290,104	+				+0.4
6,290,104	+				+0.1
6,290,104	+				-2.7
6,290,105	-				+0.1
6,290,105	-				+0.5
6,290,105	-				-0.3
6,290,105	-				-0.2
6,290,171	-		PFLU_RS28260	0.10	+0.6
6,290,171	-		PFLU_RS28260	0.10	-0.6
6,290,171	-		PFLU_RS28260	0.10	+0.4
6,290,173	+		PFLU_RS28260	0.10	+0.3
6,290,173	+		PFLU_RS28260	0.10	+0.0
6,290,173	+		PFLU_RS28260	0.10	+0.1
6,290,173	+		PFLU_RS28260	0.10	+1.6
6,290,174	-		PFLU_RS28260	0.11	+2.0
6,290,266	+		PFLU_RS28260	0.21	-1.3
6,290,266	+		PFLU_RS28260	0.21	+1.3
6,290,266	+		PFLU_RS28260	0.21	+0.0
6,290,266	+		PFLU_RS28260	0.21	-0.9
6,290,266	+		PFLU_RS28260	0.21	-0.7
6,290,267	-		PFLU_RS28260	0.22	+0.6
6,290,267	-		PFLU_RS28260	0.22	-0.4
6,290,267	-		PFLU_RS28260	0.22	+1.0
6,290,309	+		PFLU_RS28260	0.27	-0.1
6,290,344	+		PFLU_RS28260	0.31	+1.0
6,290,344	+		PFLU_RS28260	0.31	+0.5
6,290,344	+		PFLU_RS28260	0.31	+0.4
6,290,344	+		PFLU_RS28260	0.31	+1.3
6,290,345	-		PFLU_RS28260	0.31	+0.4
6,290,422	+		PFLU_RS28260	0.40	+0.4
6,290,422	+		PFLU_RS28260	0.40	-0.4
6,290,422	+		PFLU_RS28260	0.40	-0.9
6,290,422	+		PFLU_RS28260	0.40	-1.0
6,290,422	+		PFLU_RS28260	0.40	+0.7
6,290,422	+		PFLU_RS28260	0.40	-1.4
6,290,423	-		PFLU_RS28260	0.40	+0.9
6,290,423	-		PFLU_RS28260	0.40	+1.9
6,290,501	-		PFLU_RS28260	0.49	+1.0
6,290,501	-		PFLU_RS28260	0.49	-1.3
6,290,917	-				+0.6
6,290,917	-				-0.5
6,290,998	-		PFLU_RS28265	0.26	+0.7
6,291,088	+		PFLU_RS28265	0.56	-0.8
6,291,089	-		PFLU_RS28265	0.56	+0.8
6,291,089	-		PFLU_RS28265	0.56	+0.8
6,291,208	+				+0.6
6,291,208	+				-0.6
6,291,245	+				-1.6
6,291,422	-		PFLU_RS28270	0.24	+0.3
6,291,422	-		PFLU_RS28270	0.24	+0.7
6,291,795	-		PFLU_RS28270	0.69	-0.4
6,292,054	+				-0.9
6,292,084	+				-0.4
6,292,084	+				+0.8
6,292,084	+				-0.2
6,292,084	+				+1.2
6,292,084	+				+0.0
6,292,084	+				-0.4
6,292,084	+				+1.0
6,292,084	+				-1.2
6,292,084	+				-1.4
6,292,085	-				-1.5
6,292,085	-				+0.1
6,292,085	-				+0.8
6,292,085	-				+0.6
6,292,085	-				+0.7
6,292,085	-				+0.5
6,292,085	-				-0.1
6,292,085	-				-0.4
6,292,085	-				-1.7
6,292,085	-				-0.5