Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS25920

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
5,789,329	+		PFLU_RS25910	0.85	+0.7
5,789,329	+		PFLU_RS25910	0.85	+0.5
5,789,330	-		PFLU_RS25910	0.85	+0.5
5,789,330	-		PFLU_RS25910	0.85	+0.2
5,789,330	-		PFLU_RS25910	0.85	+0.7
5,789,330	-		PFLU_RS25910	0.85	-1.1
5,789,332	+		PFLU_RS25910	0.86	-0.7
5,789,332	+		PFLU_RS25910	0.86	+0.2
5,789,333	-		PFLU_RS25910	0.86	+0.3
5,789,333	-		PFLU_RS25910	0.86	+0.3
5,789,359	+		PFLU_RS25910	0.87	+0.1
5,789,360	-		PFLU_RS25910	0.87	+0.5
5,789,425	+				-1.1
5,789,425	+				+0.6
5,789,426	-				-0.0
5,789,426	-				-0.8
5,789,426	-				-1.6
5,789,603	+				+0.0
5,789,603	+				-1.2
5,789,604	-				+0.1
5,789,604	-				-0.1
5,789,605	+				-0.8
5,789,605	+				-0.7
5,789,605	+				+0.3
5,789,605	+				+0.3
5,789,605	+				-0.4
5,789,605	+				+0.9
5,789,605	+				+0.6
5,789,605	+				-1.0
5,789,605	+				-0.6
5,789,605	+				+2.1
5,789,605	+				-0.9
5,789,605	+				+1.2
5,789,605	+				+0.3
5,789,606	-				+0.0
5,789,606	-				+0.5
5,789,606	-				-0.2
5,789,606	-				-0.7
5,789,606	-				+0.1
5,789,606	-				+0.7
5,789,606	-				+0.3
5,789,606	-				-0.2
5,789,606	-				-0.9
5,789,606	-				+0.3
5,789,606	-				-0.2
5,789,606	-				+0.5
5,789,626	+				+0.0
5,789,626	+				-0.5
5,789,626	+				+0.8
5,789,626	+				+1.5
5,789,626	+				+1.3
5,789,626	+				+0.2
5,789,626	+				+1.1
5,789,626	+				+0.2
5,789,627	-				+0.5
5,789,627	-				+0.3
5,789,627	-				+0.5
5,789,627	-				-0.8
5,789,627	-				-2.3
5,789,683	-				+0.2
5,790,115	-				+1.5
5,790,124	-				+0.5
5,790,124	-				+1.5
5,790,124	-				+1.9
5,790,155	+				+2.5
5,790,155	+				+0.5
5,790,548	+		PFLU_RS25920	0.71	+0.2
5,790,548	+		PFLU_RS25920	0.71	+0.8
5,790,595	+		PFLU_RS25920	0.80	+0.8
5,790,595	+		PFLU_RS25920	0.80	-1.2
5,790,596	-		PFLU_RS25920	0.80	+1.2
5,790,596	-		PFLU_RS25920	0.80	-0.0
5,790,700	-				+1.7
5,790,700	-				-0.7
5,790,766	+				-0.6
5,790,767	-				+0.1
5,790,767	-				-0.1
5,790,767	-				-0.4
5,790,767	-				+0.1
5,790,857	+		PFLU_RS25925	0.30	+1.2
5,790,857	+		PFLU_RS25925	0.30	+0.0
5,790,858	-		PFLU_RS25925	0.31	+0.7
5,790,858	-		PFLU_RS25925	0.31	-0.1
5,790,963	-		PFLU_RS25925	0.65	+0.2
5,791,045	+				-1.1
5,791,045	+				+0.5
5,791,045	+				-0.1
5,791,045	+				-1.2
5,791,045	+				+0.5
5,791,045	+				-0.1
5,791,045	+				-0.1
5,791,045	+				-0.7
5,791,045	+				-0.5
5,791,045	+				+1.3
5,791,045	+				+0.9
5,791,046	-				+0.4
5,791,046	-				+0.3
5,791,046	-				+1.1
5,791,046	-				-0.5
5,791,504	-				+0.6
5,791,504	-				-0.3
5,791,504	-				-1.0
5,791,648	+				-0.2
5,791,648	+				-0.1
5,791,648	+				-0.6
5,791,648	+				+0.5
5,791,648	+				+0.5
5,791,648	+				+0.5
5,791,648	+				+0.8
5,791,648	+				+0.2
5,791,648	+				+0.5
5,791,648	+				+0.7
5,791,649	-				-1.1
5,791,649	-				-0.1
5,791,650	+				-0.1
5,791,650	+				-0.8
5,791,650	+				+0.5
5,791,650	+				-0.5
5,791,668	+				-0.5