Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24130

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
5,399,400	+				+0.1
5,399,400	+				-1.3
5,399,400	+				+1.3
5,399,400	+				+1.1
5,399,401	-				-0.7
5,399,401	-				-0.0
5,399,407	+				+0.2
5,399,407	+				-1.1
5,399,407	+				-0.7
5,399,407	+				-1.5
5,399,408	-				+0.1
5,399,408	-				+0.6
5,399,507	+				-0.4
5,399,526	+				+1.4
5,399,526	+				+1.4
5,399,526	+				+0.0
5,399,526	+				-2.0
5,399,527	-				+1.4
5,399,527	-				+0.4
5,399,527	-				+1.4
5,399,530	+				-3.2
5,399,530	+				-2.0
5,399,531	-				+1.4
5,399,531	-				-1.4
5,399,531	-				+0.4
5,399,571	+				-0.4
5,399,571	+				+0.4
5,399,572	-				+1.4
5,399,580	-				+1.4
5,399,656	+				-1.2
5,399,656	+				+1.6
5,399,656	+				-0.2
5,399,657	-				-1.0
5,399,657	-				+0.4
5,399,657	-				+0.4
5,399,666	+				+1.4
5,399,727	+				-0.6
5,399,727	+				+1.4
5,399,728	-				-0.6
5,399,728	-				+2.4
5,399,728	-				+0.4
5,399,728	-				+1.4
5,399,728	-				-0.2
5,399,728	-				+2.0
5,399,729	+				+1.4
5,399,783	-		PFLU_RS24125	0.18	+0.4
5,399,783	-		PFLU_RS24125	0.18	-0.2
5,399,805	+		PFLU_RS24125	0.22	+1.4
5,399,805	+		PFLU_RS24125	0.22	+0.4
5,399,833	+		PFLU_RS24125	0.26	-0.2
5,399,834	-		PFLU_RS24125	0.27	-0.2
5,399,888	+		PFLU_RS24125	0.35	+0.4
5,399,904	-		PFLU_RS24125	0.38	+0.4
5,399,928	+		PFLU_RS24125	0.42	-0.2
5,399,928	+		PFLU_RS24125	0.42	+1.4
5,399,928	+		PFLU_RS24125	0.42	+2.4
5,399,928	+		PFLU_RS24125	0.42	+1.4
5,399,928	+		PFLU_RS24125	0.42	+0.4
5,399,928	+		PFLU_RS24125	0.42	+1.4
5,399,928	+		PFLU_RS24125	0.42	+0.4
5,399,928	+		PFLU_RS24125	0.42	-0.6
5,399,928	+		PFLU_RS24125	0.42	-0.2
5,399,928	+		PFLU_RS24125	0.42	-0.6
5,399,928	+		PFLU_RS24125	0.42	+1.4
5,399,928	+		PFLU_RS24125	0.42	+0.4
5,399,928	+		PFLU_RS24125	0.42	+0.4
5,399,929	-		PFLU_RS24125	0.42	+0.4
5,399,929	-		PFLU_RS24125	0.42	+1.4
5,399,929	-		PFLU_RS24125	0.42	+1.4
5,399,929	-		PFLU_RS24125	0.42	+1.4
5,399,929	-		PFLU_RS24125	0.42	+1.4
5,399,929	-		PFLU_RS24125	0.42	+1.4
5,399,929	-		PFLU_RS24125	0.42	-0.6
5,399,929	-		PFLU_RS24125	0.42	-0.6
5,399,929	-		PFLU_RS24125	0.42	-0.6
5,399,929	-		PFLU_RS24125	0.42	+1.4
5,399,929	-		PFLU_RS24125	0.42	+0.4
5,399,929	-		PFLU_RS24125	0.42	+0.4
5,399,929	-		PFLU_RS24125	0.42	+0.4
5,399,929	-		PFLU_RS24125	0.42	+0.4
5,400,016	+		PFLU_RS24125	0.57	+1.4
5,400,016	+		PFLU_RS24125	0.57	+1.4
5,400,017	-		PFLU_RS24125	0.57	+1.4
5,400,017	-		PFLU_RS24125	0.57	+1.4
5,400,017	-		PFLU_RS24125	0.57	+1.4
5,400,017	-		PFLU_RS24125	0.57	+0.4
5,400,017	-		PFLU_RS24125	0.57	-0.6
5,400,049	+		PFLU_RS24125	0.62	+0.4
5,400,050	-		PFLU_RS24125	0.62	+0.4
5,400,114	+		PFLU_RS24125	0.73	+1.4
5,400,114	+		PFLU_RS24125	0.73	+0.4
5,400,333	+				-0.1
5,400,346	+				+0.5
5,400,346	+				-0.6
5,400,347	-				-1.8
5,400,347	-				-0.3
5,400,349	+				-1.8
5,400,349	+				-0.6
5,400,350	-				-0.1
5,400,350	-				-1.1
5,400,350	-				-0.6
5,400,350	-				+0.4
5,400,413	+		PFLU_RS24130	0.33	-0.0
5,400,413	+		PFLU_RS24130	0.33	+0.1
5,400,413	+		PFLU_RS24130	0.33	+1.1
5,400,414	-		PFLU_RS24130	0.33	+1.2
5,400,414	-		PFLU_RS24130	0.33	+0.4
5,400,414	-		PFLU_RS24130	0.33	+0.8
5,400,414	-		PFLU_RS24130	0.33	-0.5
5,400,417	+		PFLU_RS24130	0.35	+0.9
5,400,417	+		PFLU_RS24130	0.35	+1.1
5,400,417	+		PFLU_RS24130	0.35	+0.5
5,400,418	-		PFLU_RS24130	0.35	+1.0
5,400,634	+		PFLU_RS24135	0.19	+0.0
5,400,635	-		PFLU_RS24135	0.19	-0.2
5,400,635	-		PFLU_RS24135	0.19	+0.3
5,400,854	+		PFLU_RS24135	0.70	-0.1
5,400,854	+		PFLU_RS24135	0.70	+0.4
5,400,863	+		PFLU_RS24135	0.72	+0.6
5,400,863	+		PFLU_RS24135	0.72	+0.2
5,400,863	+		PFLU_RS24135	0.72	+0.3
5,400,863	+		PFLU_RS24135	0.72	-0.5
5,400,889	+		PFLU_RS24135	0.78	-0.4
5,400,889	+		PFLU_RS24135	0.78	+0.1
5,400,889	+		PFLU_RS24135	0.78	+1.1
5,400,890	-		PFLU_RS24135	0.79	+1.6
5,400,890	-		PFLU_RS24135	0.79	-2.1
5,400,890	-		PFLU_RS24135	0.79	+0.4
5,400,890	-		PFLU_RS24135	0.79	+0.1
5,400,890	-		PFLU_RS24135	0.79	-0.6
5,400,890	-		PFLU_RS24135	0.79	-0.4
5,400,969	+				-0.1
5,401,024	+				+0.1
5,401,024	+				-0.9
5,401,024	+				-0.2
5,401,024	+				+0.0
5,401,024	+				+0.3
5,401,024	+				-0.8
5,401,024	+				-0.1
5,401,024	+				-0.8
5,401,025	-				+1.0
5,401,025	-				+0.8
5,401,025	-				-0.9
5,401,025	-				+0.5
5,401,025	-				+1.4
5,401,025	-				+0.8
5,401,099	+				+0.6
5,401,099	+				+0.5
5,401,100	-				-0.7
5,401,100	-				+1.2
5,401,113	+				-1.1
5,401,114	-				+0.9
5,401,122	+				-0.5
5,401,173	+				-0.2
5,401,271	+				-0.4
5,401,271	+				-0.0
5,401,271	+				-1.5
5,401,271	+				-0.3
5,401,271	+				+0.5
5,401,271	+				+0.1
5,401,271	+				-0.7
5,401,271	+				+0.5
5,401,271	+				-0.2
5,401,272	-				+0.6
5,401,272	-				-0.5
5,401,272	-				+0.5
5,401,272	-				+0.5
5,401,272	-				-0.0
5,401,272	-				+0.3
5,401,272	-				-0.2
5,401,272	-				-1.5
5,401,272	-				+1.0
5,401,354	+				+0.9
5,401,354	+				+0.4
5,401,355	-				-0.8
5,401,355	-				+1.1
5,401,355	-				+0.2
5,401,413	+				-0.5
5,401,414	-				+1.0
5,401,500	+				-0.9
5,401,500	+				-1.3
5,401,501	-				-1.2
5,401,501	-				+0.2