Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS23325

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
5,240,286	+		PFLU_RS23320	0.83	+1.0
5,240,286	+		PFLU_RS23320	0.83	-1.4
5,240,317	+		PFLU_RS23320	0.84	+0.4
5,240,317	+		PFLU_RS23320	0.84	+0.0
5,240,318	-		PFLU_RS23320	0.84	+0.3
5,240,318	-		PFLU_RS23320	0.84	-0.1
5,240,318	-		PFLU_RS23320	0.84	+0.9
5,240,364	-		PFLU_RS23320	0.85	+0.7
5,240,612	+		PFLU_RS23320	0.89	+0.7
5,240,612	+		PFLU_RS23320	0.89	-2.1
5,240,612	+		PFLU_RS23320	0.89	+0.6
5,240,612	+		PFLU_RS23320	0.89	+0.7
5,240,612	+		PFLU_RS23320	0.89	-0.4
5,240,613	-		PFLU_RS23320	0.89	+0.6
5,240,613	-		PFLU_RS23320	0.89	+1.0
5,240,613	-		PFLU_RS23320	0.89	-1.3
5,240,726	+				-0.1
5,240,726	+				+0.4
5,240,727	-				+0.8
5,240,727	-				+0.2
5,240,727	-				+0.4
5,240,727	-				+0.4
5,240,727	-				+0.9
5,240,803	-				+0.4
5,240,896	+				+1.3
5,240,896	+				-0.0
5,240,896	+				-2.0
5,240,896	+				+0.5
5,240,897	-				+0.1
5,240,897	-				-1.3
5,240,949	+				+0.7
5,240,950	-				+0.5
5,240,950	-				+2.0
5,240,950	-				+0.2
5,240,968	+				-0.1
5,240,968	+				-0.4
5,240,968	+				+0.7
5,240,969	-				+0.4
5,240,969	-				+0.8
5,241,166	+				+1.3
5,241,166	+				-0.3
5,241,166	+				+0.4
5,241,166	+				+1.0
5,241,166	+				-1.2
5,241,166	+				-1.3
5,241,166	+				+0.7
5,241,166	+				-0.8
5,241,166	+				-0.3
5,241,166	+				+0.1
5,241,166	+				+0.5
5,241,167	-				+0.1
5,241,167	-				-2.3
5,241,167	-				-0.7
5,241,167	-				-1.5
5,241,167	-				-0.1
5,241,167	-				+0.2
5,241,167	-				-0.4
5,241,167	-				-0.7
5,241,167	-				+0.5
5,241,167	-				+0.0
5,241,167	-				+1.3
5,241,167	-				-0.6
5,241,167	-				+0.6
5,241,167	-				+0.3
5,241,167	-				-0.2
5,241,167	-				-0.1
5,241,167	-				+0.6
5,241,167	-				+0.7
5,241,170	+				+0.2
5,241,170	+				+0.1
5,241,170	+				-1.3
5,241,170	+				+1.3
5,241,170	+				-1.4
5,241,170	+				-0.7
5,241,170	+				+0.4
5,241,171	-				+1.7
5,241,171	-				-1.1
5,241,171	-				-0.1
5,241,171	-				+0.3
5,241,171	-				-0.9
5,241,265	+				+2.9
5,241,265	+				+0.5
5,241,265	+				+0.8
5,241,265	+				+0.2
5,241,266	-				-0.6
5,241,266	-				-0.4
5,241,309	+				+0.8
5,241,309	+				+0.4
5,241,309	+				-0.1
5,241,310	-				-0.0
5,241,479	+		PFLU_RS23325	0.22	+1.4
5,241,479	+		PFLU_RS23325	0.22	+0.6
5,241,479	+		PFLU_RS23325	0.22	+0.4
5,241,479	+		PFLU_RS23325	0.22	+0.8
5,241,479	+		PFLU_RS23325	0.22	-0.8
5,241,479	+		PFLU_RS23325	0.22	+0.2
5,241,480	-		PFLU_RS23325	0.22	+0.2
5,241,480	-		PFLU_RS23325	0.22	+0.5
5,241,480	-		PFLU_RS23325	0.22	+1.1
5,241,480	-		PFLU_RS23325	0.22	+0.0
5,241,482	+		PFLU_RS23325	0.22	+1.3
5,241,482	+		PFLU_RS23325	0.22	+1.1
5,241,483	-		PFLU_RS23325	0.22	-0.7
5,241,483	-		PFLU_RS23325	0.22	-0.3
5,241,483	-		PFLU_RS23325	0.22	+0.6
5,241,483	-		PFLU_RS23325	0.22	-0.0
5,241,483	-		PFLU_RS23325	0.22	+1.9
5,241,483	-		PFLU_RS23325	0.22	+0.6
5,241,506	+		PFLU_RS23325	0.24	+0.6
5,241,506	+		PFLU_RS23325	0.24	+0.0
5,241,506	+		PFLU_RS23325	0.24	-1.8
5,241,507	-		PFLU_RS23325	0.24	+0.1
5,241,507	-		PFLU_RS23325	0.24	+1.2
5,241,507	-		PFLU_RS23325	0.24	+1.1
5,241,507	-		PFLU_RS23325	0.24	+0.6
5,241,507	-		PFLU_RS23325	0.24	+1.1
5,241,660	+		PFLU_RS23325	0.40	+0.2
5,241,660	+		PFLU_RS23325	0.40	+0.5
5,241,660	+		PFLU_RS23325	0.40	+0.3
5,241,660	+		PFLU_RS23325	0.40	-0.7
5,241,660	+		PFLU_RS23325	0.40	-0.1
5,241,661	-		PFLU_RS23325	0.40	-1.2
5,241,661	-		PFLU_RS23325	0.40	+1.1
5,241,661	-		PFLU_RS23325	0.40	-0.1
5,242,136	+		PFLU_RS23325	0.88	+0.2
5,242,136	+		PFLU_RS23325	0.88	-0.0
5,242,136	+		PFLU_RS23325	0.88	+0.2
5,242,136	+		PFLU_RS23325	0.88	+0.4
5,242,136	+		PFLU_RS23325	0.88	+0.0
5,242,136	+		PFLU_RS23325	0.88	+0.9
5,242,136	+		PFLU_RS23325	0.88	-0.5
5,242,136	+		PFLU_RS23325	0.88	-0.4
5,242,136	+		PFLU_RS23325	0.88	+1.0
5,242,136	+		PFLU_RS23325	0.88	+0.0
5,242,136	+		PFLU_RS23325	0.88	+1.9
5,242,136	+		PFLU_RS23325	0.88	+0.0
5,242,136	+		PFLU_RS23325	0.88	+0.7
5,242,137	-		PFLU_RS23325	0.89	+0.5
5,242,137	-		PFLU_RS23325	0.89	+0.7
5,242,137	-		PFLU_RS23325	0.89	+0.7
5,242,137	-		PFLU_RS23325	0.89	-1.0
5,242,137	-		PFLU_RS23325	0.89	-1.3
5,242,269	+				+0.2
5,242,270	-				-1.7
5,242,270	-				+0.7
5,242,275	+				+0.4
5,242,275	+				+1.2
5,242,276	-				+0.3
5,242,276	-				-0.1
5,242,276	-				+0.9
5,242,276	-				-0.6
5,242,276	-				-0.3
5,242,276	-				+0.7
5,242,298	-				+1.3
5,242,298	-				-1.1
5,242,298	-				+0.8
5,242,393	+				-1.7
5,242,394	-				-2.9
5,242,449	+				+0.0
5,242,449	+				-0.5
5,242,449	+				+0.3
5,242,449	+				-0.2
5,242,449	+				+1.3
5,242,449	+				+0.3
5,242,450	-				+0.7
5,242,450	-				-2.5
5,242,730	+		PFLU_RS23330	0.44	+0.3
5,242,731	-		PFLU_RS23330	0.44	-0.3
5,242,759	+		PFLU_RS23330	0.48	+0.6
5,242,759	+		PFLU_RS23330	0.48	+0.6
5,242,759	+		PFLU_RS23330	0.48	+1.3
5,242,759	+		PFLU_RS23330	0.48	+0.2
5,242,760	-		PFLU_RS23330	0.48	+0.1
5,242,760	-		PFLU_RS23330	0.48	-0.4
5,242,760	-		PFLU_RS23330	0.48	+0.0
5,242,760	-		PFLU_RS23330	0.48	+0.4
5,243,027	+		PFLU_RS23330	0.83	-0.0
5,243,028	-		PFLU_RS23330	0.83	-0.6
5,243,028	-		PFLU_RS23330	0.83	-0.7
5,243,028	-		PFLU_RS23330	0.83	-0.5
5,243,119	+				+0.1
5,243,119	+				+0.2
5,243,120	-				-0.2
5,243,120	-				+0.1
5,243,126	+				+0.7
5,243,126	+				+0.3
5,243,126	+				-0.8
5,243,126	+				+0.5
5,243,127	-				+2.6
5,243,152	+				-1.5
5,243,152	+				-0.7
5,243,152	+				-0.4
5,243,152	+				-0.9
5,243,152	+				+1.9
5,243,153	-				+0.7
5,243,153	-				+1.0
5,243,153	-				-0.4
5,243,153	-				-0.2
5,243,153	-				-1.8
5,243,153	-				-0.3