Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS23175

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
5,208,283	+		PFLU_RS23165	0.86	+1.0
5,208,283	+		PFLU_RS23165	0.86	+0.3
5,208,283	+		PFLU_RS23165	0.86	+1.5
5,208,284	-		PFLU_RS23165	0.87	+0.6
5,208,284	-		PFLU_RS23165	0.87	-0.1
5,208,284	-		PFLU_RS23165	0.87	+0.4
5,208,332	+				-0.6
5,208,332	+				+0.3
5,208,332	+				-0.7
5,208,332	+				+0.3
5,208,332	+				+0.6
5,208,333	-				-0.6
5,208,333	-				+0.0
5,208,333	-				+0.8
5,208,333	-				+0.7
5,208,333	-				+0.1
5,208,333	-				-0.1
5,208,333	-				+0.1
5,208,428	+				+0.4
5,208,428	+				+0.8
5,208,428	+				+2.0
5,208,429	-				+0.8
5,208,429	-				+0.4
5,208,429	-				+0.3
5,208,429	-				+0.2
5,208,429	-				-1.3
5,208,438	+				+0.8
5,208,450	+				+0.0
5,208,450	+				-0.2
5,208,450	+				-0.0
5,208,450	+				+0.4
5,208,450	+				+0.5
5,208,450	+				+1.2
5,208,451	-				+0.5
5,208,451	-				+1.1
5,208,451	-				+1.9
5,208,451	-				-1.1
5,208,478	+				+1.0
5,208,478	+				+0.2
5,208,479	-				-0.3
5,208,482	+				-3.2
5,208,482	+				+0.5
5,208,483	-				+0.4
5,208,492	+				-0.3
5,208,492	+				-0.9
5,208,492	+				+0.3
5,208,492	+				+0.6
5,208,492	+				-0.2
5,208,492	+				+2.3
5,208,492	+				+0.3
5,208,492	+				+1.2
5,208,492	+				-0.9
5,208,492	+				-0.7
5,208,492	+				-0.0
5,208,492	+				+0.1
5,208,492	+				-1.0
5,208,492	+				-0.3
5,208,492	+				+0.3
5,208,492	+				-0.3
5,208,492	+				-0.4
5,208,492	+				-2.0
5,208,493	-				-0.6
5,208,493	-				-0.2
5,208,493	-				+0.5
5,208,493	-				+0.0
5,208,493	-				+1.3
5,208,493	-				+0.9
5,208,493	-				+1.3
5,208,493	-				-0.6
5,208,493	-				+0.6
5,208,493	-				+1.0
5,208,493	-				+0.6
5,208,493	-				+0.9
5,208,493	-				-0.1
5,208,493	-				-1.3
5,208,493	-				-0.6
5,208,493	-				-1.0
5,208,493	-				-0.3
5,208,493	-				+1.0
5,208,493	-				-0.6
5,208,493	-				+0.2
5,208,493	-				+0.2
5,208,496	+				+0.1
5,208,496	+				-0.3
5,208,496	+				+0.5
5,208,497	-				-1.0
5,208,497	-				-0.7
5,208,497	-				-0.8
5,208,497	-				-0.1
5,208,502	+				+0.5
5,208,593	+		PFLU_RS23170	0.14	+0.8
5,208,649	+		PFLU_RS23170	0.22	+0.9
5,208,650	-		PFLU_RS23170	0.22	+0.9
5,208,650	-		PFLU_RS23170	0.22	-0.6
5,208,666	+		PFLU_RS23170	0.24	-1.7
5,208,666	+		PFLU_RS23170	0.24	-0.3
5,208,666	+		PFLU_RS23170	0.24	+1.7
5,208,666	+		PFLU_RS23170	0.24	-0.3
5,208,666	+		PFLU_RS23170	0.24	+0.6
5,208,666	+		PFLU_RS23170	0.24	+1.3
5,208,666	+		PFLU_RS23170	0.24	+1.4
5,208,666	+		PFLU_RS23170	0.24	+0.3
5,208,666	+		PFLU_RS23170	0.24	+0.1
5,208,667	-		PFLU_RS23170	0.24	-0.9
5,208,667	-		PFLU_RS23170	0.24	-0.7
5,208,667	-		PFLU_RS23170	0.24	-0.7
5,208,667	-		PFLU_RS23170	0.24	-1.1
5,208,667	-		PFLU_RS23170	0.24	-1.1
5,208,667	-		PFLU_RS23170	0.24	-0.4
5,208,667	-		PFLU_RS23170	0.24	-0.3
5,208,667	-		PFLU_RS23170	0.24	-0.8
5,208,667	-		PFLU_RS23170	0.24	+1.5
5,208,667	-		PFLU_RS23170	0.24	-0.9
5,208,946	+		PFLU_RS23170	0.63	+0.3
5,208,946	+		PFLU_RS23170	0.63	+0.7
5,208,946	+		PFLU_RS23170	0.63	+1.0
5,208,947	-		PFLU_RS23170	0.63	-0.3
5,208,947	-		PFLU_RS23170	0.63	-0.2
5,208,947	-		PFLU_RS23170	0.63	-1.1
5,208,947	-		PFLU_RS23170	0.63	+0.3
5,208,947	-		PFLU_RS23170	0.63	+0.2
5,208,947	-		PFLU_RS23170	0.63	+0.6
5,208,985	+		PFLU_RS23170	0.68	+0.5
5,209,195	+				-0.5
5,209,195	+				+0.3
5,209,195	+				-0.2
5,209,195	+				+0.5
5,209,196	-				+0.8
5,209,196	-				+0.4
5,209,196	-				+0.3
5,209,196	-				+0.1
5,209,196	-				+0.3
5,209,201	+				-0.3
5,209,201	+				+0.3
5,209,202	-				+0.2
5,209,202	-				+0.1
5,209,217	+				+1.1
5,209,217	+				+0.0
5,209,217	+				-0.2
5,209,217	+				-0.3
5,209,218	-				-0.2
5,209,232	-				-3.4
5,209,363	+		PFLU_RS23175	0.29	-0.1
5,209,363	+		PFLU_RS23175	0.29	-0.3
5,209,363	+		PFLU_RS23175	0.29	+0.1
5,209,363	+		PFLU_RS23175	0.29	+1.4
5,209,363	+		PFLU_RS23175	0.29	+0.7
5,209,363	+		PFLU_RS23175	0.29	+1.3
5,209,363	+		PFLU_RS23175	0.29	+0.9
5,209,363	+		PFLU_RS23175	0.29	+0.1
5,209,363	+		PFLU_RS23175	0.29	-0.6
5,209,363	+		PFLU_RS23175	0.29	+0.4
5,209,363	+		PFLU_RS23175	0.29	-0.1
5,209,364	-		PFLU_RS23175	0.30	+0.6
5,209,364	-		PFLU_RS23175	0.30	+0.2
5,209,364	-		PFLU_RS23175	0.30	+0.4
5,209,364	-		PFLU_RS23175	0.30	+1.5
5,209,364	-		PFLU_RS23175	0.30	+0.6
5,209,364	-		PFLU_RS23175	0.30	+1.1
5,209,364	-		PFLU_RS23175	0.30	+1.0
5,209,364	-		PFLU_RS23175	0.30	+1.2
5,209,369	+		PFLU_RS23175	0.31	-1.8
5,209,446	+		PFLU_RS23175	0.48	+1.3
5,209,447	-		PFLU_RS23175	0.48	+1.0
5,209,447	-		PFLU_RS23175	0.48	+0.7
5,209,552	+		PFLU_RS23175	0.72	+0.3
5,209,599	-		PFLU_RS23175	0.82	+0.1
5,209,653	-				+0.8
5,209,653	-				+1.7
5,209,655	+				+1.0
5,209,656	-				+0.7
5,209,656	-				+0.1
5,209,656	-				-0.4
5,209,681	+				+0.1
5,209,681	+				+0.4
5,209,681	+				+0.7
5,209,681	+				+0.1
5,209,681	+				+0.4
5,209,682	-				+2.3
5,209,682	-				+0.5
5,209,682	-				+0.5
5,209,682	-				+0.4
5,209,724	+		PFLU_RS23180	0.11	+0.8
5,209,724	+		PFLU_RS23180	0.11	+0.3
5,209,724	+		PFLU_RS23180	0.11	-0.1
5,209,724	+		PFLU_RS23180	0.11	+1.3
5,209,724	+		PFLU_RS23180	0.11	+0.5
5,209,724	+		PFLU_RS23180	0.11	+2.6
5,209,724	+		PFLU_RS23180	0.11	-0.6
5,209,724	+		PFLU_RS23180	0.11	+0.3
5,209,725	-		PFLU_RS23180	0.11	-0.4
5,209,725	-		PFLU_RS23180	0.11	+0.8
5,209,725	-		PFLU_RS23180	0.11	-0.1
5,209,768	+		PFLU_RS23180	0.22	+0.2
5,209,768	+		PFLU_RS23180	0.22	+0.7
5,209,768	+		PFLU_RS23180	0.22	-1.3
5,209,769	-		PFLU_RS23180	0.22	-0.5
5,209,834	+		PFLU_RS23180	0.38	+1.2
5,209,877	+		PFLU_RS23180	0.48	+0.1
5,209,877	+		PFLU_RS23180	0.48	+0.7
5,209,877	+		PFLU_RS23180	0.48	-0.2
5,209,877	+		PFLU_RS23180	0.48	+0.8
5,209,877	+		PFLU_RS23180	0.48	+1.7
5,209,878	-		PFLU_RS23180	0.49	+0.2
5,209,878	-		PFLU_RS23180	0.49	+1.1
5,209,878	-		PFLU_RS23180	0.49	+1.4
5,209,878	-		PFLU_RS23180	0.49	+0.2
5,209,975	+		PFLU_RS23180	0.72	-0.3
5,209,975	+		PFLU_RS23180	0.72	+0.6
5,209,975	+		PFLU_RS23180	0.72	+0.5
5,209,975	+		PFLU_RS23180	0.72	+0.5
5,209,976	-		PFLU_RS23180	0.73	+1.3
5,209,976	-		PFLU_RS23180	0.73	+1.7
5,209,976	-		PFLU_RS23180	0.73	+0.1
5,209,976	-		PFLU_RS23180	0.73	+0.6
5,209,976	-		PFLU_RS23180	0.73	+0.7
5,209,976	-		PFLU_RS23180	0.73	+0.3
5,209,976	-		PFLU_RS23180	0.73	+0.7
5,209,976	-		PFLU_RS23180	0.73	+0.4
5,209,976	-		PFLU_RS23180	0.73	-0.3
5,209,976	-		PFLU_RS23180	0.73	+1.2
5,209,976	-		PFLU_RS23180	0.73	-0.3
5,209,976	-		PFLU_RS23180	0.73	+0.8
5,209,976	-		PFLU_RS23180	0.73	-1.2
5,209,976	-		PFLU_RS23180	0.73	-0.4
5,210,101	-				-0.6
5,210,101	-				-0.2
5,210,132	-				-0.3
5,210,132	-				+0.7
5,210,132	-				+0.3
5,210,165	-				+0.2
5,210,165	-				-0.1
5,210,166	+				-0.2
5,210,166	+				+0.8
5,210,166	+				-1.7
5,210,167	-				-0.1
5,210,167	-				+0.1
5,210,239	-				-0.9
5,210,329	+				+1.3
5,210,329	+				-1.3
5,210,329	+				-1.9
5,210,329	+				-0.2
5,210,329	+				+0.8
5,210,329	+				+0.1
5,210,329	+				+0.1
5,210,329	+				+0.1
5,210,329	+				+1.0
5,210,329	+				-0.6
5,210,329	+				+0.5
5,210,329	+				+0.1
5,210,329	+				-0.7
5,210,329	+				-0.7
5,210,329	+				-2.3
5,210,329	+				-0.9
5,210,329	+				-0.5
5,210,329	+				+0.4
5,210,329	+				-0.8
5,210,329	+				+0.2
5,210,329	+				-1.9
5,210,329	+				-1.1
5,210,330	-				+0.4
5,210,330	-				-0.3
5,210,330	-				-1.1
5,210,330	-				-0.4
5,210,330	-				-0.4
5,210,330	-				-1.5
5,210,330	-				+0.3
5,210,330	-				+0.1
5,210,330	-				+0.4
5,210,330	-				-0.3
5,210,330	-				+0.7
5,210,330	-				-1.4
5,210,330	-				-0.1
5,210,330	-				+0.3
5,210,330	-				-1.0
5,210,330	-				-0.0
5,210,330	-				-0.1
5,210,330	-				-1.5
5,210,330	-				-0.0
5,210,330	-				-0.1
5,210,330	-				+1.6
5,210,330	-				-1.0
5,210,330	-				-0.3
5,210,330	-				-0.1
5,210,330	-				+0.6
5,210,333	+				-0.7
5,210,333	+				+0.3
5,210,333	+				-0.5
5,210,333	+				-0.5
5,210,333	+				+0.4
5,210,333	+				-0.1
5,210,333	+				-0.1
5,210,333	+				-1.1
5,210,333	+				+0.3
5,210,333	+				-0.9
5,210,333	+				-1.3
5,210,333	+				-0.3
5,210,333	+				-1.4
5,210,333	+				-0.3
5,210,333	+				+0.7
5,210,333	+				-1.5
5,210,333	+				+0.8
5,210,333	+				+2.0
5,210,333	+				+0.4
5,210,333	+				+0.2
5,210,333	+				-0.3
5,210,333	+				-2.1
5,210,333	+				-1.0
5,210,333	+				-1.5
5,210,333	+				-0.4
5,210,333	+				+1.3
5,210,333	+				-0.6
5,210,333	+				-0.4
5,210,333	+				-1.0
5,210,333	+				-0.7
5,210,333	+				-0.2
5,210,333	+				+1.0
5,210,333	+				+0.2
5,210,333	+				-0.9
5,210,333	+				+0.1
5,210,333	+				+1.1
5,210,333	+				-1.8
5,210,333	+				-1.1
5,210,333	+				+1.1
5,210,333	+				+0.3
5,210,333	+				+0.7
5,210,333	+				+0.6
5,210,333	+				+0.4
5,210,333	+				+0.4
5,210,333	+				+0.7
5,210,333	+				+1.0
5,210,333	+				+1.3
5,210,333	+				-0.2
5,210,333	+				+0.1
5,210,333	+				-0.3
5,210,333	+				-0.0
5,210,333	+				+0.8
5,210,333	+				+1.0
5,210,333	+				+1.6
5,210,333	+				+1.3
5,210,333	+				-0.6
5,210,333	+				-0.6
5,210,333	+				-0.6
5,210,333	+				-0.2
5,210,333	+				+0.6
5,210,333	+				-1.5
5,210,333	+				-0.7
5,210,333	+				-0.2
5,210,333	+				+0.4
5,210,333	+				-1.3
5,210,333	+				-0.7
5,210,333	+				-0.0
5,210,333	+				-1.4
5,210,333	+				-0.1
5,210,333	+				+0.8
5,210,333	+				-0.5
5,210,333	+				+0.6
5,210,333	+				+0.3
5,210,333	+				-1.5
5,210,333	+				+0.6
5,210,334	-				-0.9
5,210,334	-				+1.0
5,210,334	-				+0.7
5,210,334	-				+0.2
5,210,334	-				-0.1
5,210,334	-				-0.0
5,210,334	-				+1.5
5,210,334	-				-1.0
5,210,334	-				+0.4
5,210,334	-				+0.5
5,210,334	-				+1.4
5,210,334	-				+0.6
5,210,334	-				-0.3
5,210,334	-				-0.9
5,210,334	-				+0.4
5,210,334	-				+0.3
5,210,334	-				-0.4
5,210,334	-				-0.6
5,210,334	-				+0.5
5,210,334	-				-0.2
5,210,334	-				+0.2
5,210,334	-				-0.5
5,210,334	-				-0.7
5,210,334	-				+0.2
5,210,334	-				-0.6
5,210,334	-				-0.7
5,210,334	-				-0.7
5,210,334	-				-0.3
5,210,334	-				-0.0
5,210,334	-				-0.1
5,210,334	-				+0.1
5,210,334	-				-0.1
5,210,334	-				-0.5
5,210,334	-				-1.0
5,210,334	-				-0.1
5,210,334	-				+0.7
5,210,334	-				-0.0
5,210,334	-				-1.1
5,210,334	-				+0.7
5,210,334	-				+0.7
5,210,334	-				-1.5
5,210,334	-				-0.3
5,210,334	-				-0.4
5,210,334	-				-0.9
5,210,334	-				+0.9
5,210,334	-				+0.2
5,210,334	-				+0.3
5,210,334	-				+0.4
5,210,334	-				-0.3
5,210,334	-				-1.3
5,210,334	-				+1.0
5,210,334	-				-0.8
5,210,334	-				+0.4
5,210,334	-				+1.1
5,210,334	-				+1.5
5,210,334	-				+0.5
5,210,334	-				+0.7
5,210,334	-				+0.8
5,210,334	-				-0.7
5,210,334	-				-0.0
5,210,334	-				+0.2
5,210,334	-				+0.3
5,210,334	-				-0.3
5,210,334	-				-1.7
5,210,334	-				-0.3
5,210,334	-				-0.8
5,210,334	-				-0.3
5,210,334	-				+0.3
5,210,334	-				+2.0
5,210,334	-				+0.5
5,210,334	-				+0.6
5,210,334	-				-0.5
5,210,334	-				-0.5
5,210,334	-				-1.1
5,210,334	-				-0.9
5,210,336	-				+0.1
5,210,336	-				-0.5
5,210,336	-				+0.3
5,210,336	-				-0.4
5,210,336	-				-1.3
5,210,336	-				-0.5
5,210,336	-				-0.0
5,210,336	-				+0.3
5,210,336	-				-0.1
5,210,398	+				+0.3
5,210,398	+				+0.4
5,210,398	+				+0.8
5,210,398	+				+0.0
5,210,398	+				-0.0
5,210,398	+				+1.4
5,210,398	+				-0.1
5,210,398	+				-1.4
5,210,398	+				-1.2
5,210,398	+				+0.1
5,210,398	+				+0.1
5,210,399	-				+0.1
5,210,399	-				-0.3
5,210,399	-				+0.6
5,210,399	-				+0.1
5,210,410	+				-1.2
5,210,410	+				-2.0
5,210,410	+				-0.0
5,210,410	+				+0.3
5,210,411	-				+0.1
5,210,411	-				+0.1
5,210,411	-				-1.1
5,210,443	+				-0.7
5,210,444	-				-0.5
5,210,491	+		PFLU_RS23185	0.11	+1.3
5,210,491	+		PFLU_RS23185	0.11	-1.4
5,210,492	-		PFLU_RS23185	0.11	-1.1
5,210,557	+		PFLU_RS23185	0.19	-1.5
5,210,557	+		PFLU_RS23185	0.19	-0.8
5,210,557	+		PFLU_RS23185	0.19	-1.5
5,210,557	+		PFLU_RS23185	0.19	-2.0
5,210,557	+		PFLU_RS23185	0.19	-0.7
5,210,557	+		PFLU_RS23185	0.19	-1.4
5,210,557	+		PFLU_RS23185	0.19	-1.7
5,210,557	+		PFLU_RS23185	0.19	-1.3
5,210,557	+		PFLU_RS23185	0.19	-0.0
5,210,557	+		PFLU_RS23185	0.19	-1.7
5,210,558	-		PFLU_RS23185	0.19	-0.9
5,210,558	-		PFLU_RS23185	0.19	-0.8
5,210,558	-		PFLU_RS23185	0.19	-1.7
5,210,558	-		PFLU_RS23185	0.19	+0.3
5,210,558	-		PFLU_RS23185	0.19	-2.5
5,210,558	-		PFLU_RS23185	0.19	-0.4
5,210,558	-		PFLU_RS23185	0.19	-1.1
5,210,558	-		PFLU_RS23185	0.19	-1.5
5,210,558	-		PFLU_RS23185	0.19	-0.5
5,210,558	-		PFLU_RS23185	0.19	-2.0
5,210,558	-		PFLU_RS23185	0.19	-1.7
5,210,558	-		PFLU_RS23185	0.19	-2.2
5,210,558	-		PFLU_RS23185	0.19	-0.3
5,210,608	+		PFLU_RS23185	0.25	-0.9
5,210,608	+		PFLU_RS23185	0.25	-1.0
5,210,608	+		PFLU_RS23185	0.25	-2.4
5,210,609	-		PFLU_RS23185	0.26	-0.3
5,210,609	-		PFLU_RS23185	0.26	-0.8
5,210,609	-		PFLU_RS23185	0.26	-2.7
5,210,609	-		PFLU_RS23185	0.26	-1.0