Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22530

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
5,069,059	+		PFLU_RS22525	0.25	+0.4
5,069,059	+		PFLU_RS22525	0.25	+0.3
5,069,060	-		PFLU_RS22525	0.25	-1.0
5,069,060	-		PFLU_RS22525	0.25	-0.4
5,069,060	-		PFLU_RS22525	0.25	-0.4
5,069,060	-		PFLU_RS22525	0.25	+0.3
5,069,060	-		PFLU_RS22525	0.25	+0.2
5,069,080	+		PFLU_RS22525	0.26	+1.3
5,069,080	+		PFLU_RS22525	0.26	+0.2
5,069,080	+		PFLU_RS22525	0.26	-0.8
5,069,080	+		PFLU_RS22525	0.26	-0.5
5,069,080	+		PFLU_RS22525	0.26	+0.3
5,069,080	+		PFLU_RS22525	0.26	+0.2
5,069,080	+		PFLU_RS22525	0.26	+0.3
5,069,080	+		PFLU_RS22525	0.26	-1.0
5,069,080	+		PFLU_RS22525	0.26	-1.0
5,069,080	+		PFLU_RS22525	0.26	+0.3
5,069,081	-		PFLU_RS22525	0.27	+0.4
5,069,081	-		PFLU_RS22525	0.27	-0.4
5,069,081	-		PFLU_RS22525	0.27	+0.3
5,069,081	-		PFLU_RS22525	0.27	-0.0
5,069,081	-		PFLU_RS22525	0.27	-1.4
5,069,081	-		PFLU_RS22525	0.27	-1.0
5,069,081	-		PFLU_RS22525	0.27	-1.7
5,069,081	-		PFLU_RS22525	0.27	+1.1
5,069,081	-		PFLU_RS22525	0.27	-1.7
5,069,081	-		PFLU_RS22525	0.27	-1.3
5,069,081	-		PFLU_RS22525	0.27	-0.4
5,069,085	+		PFLU_RS22525	0.27	-0.7
5,069,085	+		PFLU_RS22525	0.27	-1.4
5,069,085	+		PFLU_RS22525	0.27	+0.1
5,069,085	+		PFLU_RS22525	0.27	-0.7
5,069,085	+		PFLU_RS22525	0.27	+0.3
5,069,085	+		PFLU_RS22525	0.27	-0.6
5,069,085	+		PFLU_RS22525	0.27	+0.7
5,069,085	+		PFLU_RS22525	0.27	-0.4
5,069,085	+		PFLU_RS22525	0.27	-1.0
5,069,085	+		PFLU_RS22525	0.27	+0.5
5,069,085	+		PFLU_RS22525	0.27	-0.8
5,069,086	-		PFLU_RS22525	0.27	-0.7
5,069,086	-		PFLU_RS22525	0.27	+0.3
5,069,086	-		PFLU_RS22525	0.27	-0.3
5,069,086	-		PFLU_RS22525	0.27	+0.7
5,069,086	-		PFLU_RS22525	0.27	+0.1
5,069,086	-		PFLU_RS22525	0.27	+0.6
5,069,086	-		PFLU_RS22525	0.27	+0.2
5,069,086	-		PFLU_RS22525	0.27	-1.4
5,069,086	-		PFLU_RS22525	0.27	+1.3
5,069,086	-		PFLU_RS22525	0.27	+0.2
5,069,086	-		PFLU_RS22525	0.27	+0.3
5,069,086	-		PFLU_RS22525	0.27	+0.6
5,069,263	+		PFLU_RS22525	0.42	+1.1
5,069,263	+		PFLU_RS22525	0.42	+0.7
5,069,263	+		PFLU_RS22525	0.42	-0.0
5,069,263	+		PFLU_RS22525	0.42	-1.2
5,069,263	+		PFLU_RS22525	0.42	+0.0
5,069,263	+		PFLU_RS22525	0.42	-0.1
5,069,263	+		PFLU_RS22525	0.42	-0.1
5,069,263	+		PFLU_RS22525	0.42	-0.1
5,069,264	-		PFLU_RS22525	0.42	-0.4
5,069,264	-		PFLU_RS22525	0.42	-0.2
5,069,264	-		PFLU_RS22525	0.42	+0.6
5,069,264	-		PFLU_RS22525	0.42	-1.4
5,069,264	-		PFLU_RS22525	0.42	-0.2
5,069,264	-		PFLU_RS22525	0.42	-0.7
5,069,264	-		PFLU_RS22525	0.42	-1.4
5,069,264	-		PFLU_RS22525	0.42	-1.2
5,069,264	-		PFLU_RS22525	0.42	-0.2
5,069,264	-		PFLU_RS22525	0.42	-0.5
5,069,264	-		PFLU_RS22525	0.42	-0.0
5,069,264	-		PFLU_RS22525	0.42	-0.4
5,069,264	-		PFLU_RS22525	0.42	-0.4
5,069,264	-		PFLU_RS22525	0.42	+0.7
5,069,264	-		PFLU_RS22525	0.42	-0.2
5,069,267	+		PFLU_RS22525	0.42	+1.3
5,069,267	+		PFLU_RS22525	0.42	-0.9
5,069,267	+		PFLU_RS22525	0.42	+0.0
5,069,267	+		PFLU_RS22525	0.42	+1.6
5,069,267	+		PFLU_RS22525	0.42	+0.6
5,069,267	+		PFLU_RS22525	0.42	-0.3
5,069,267	+		PFLU_RS22525	0.42	-0.4
5,069,267	+		PFLU_RS22525	0.42	+0.3
5,069,267	+		PFLU_RS22525	0.42	-0.2
5,069,267	+		PFLU_RS22525	0.42	+0.5
5,069,267	+		PFLU_RS22525	0.42	-0.0
5,069,267	+		PFLU_RS22525	0.42	+0.2
5,069,267	+		PFLU_RS22525	0.42	-0.7
5,069,267	+		PFLU_RS22525	0.42	-0.4
5,069,268	-		PFLU_RS22525	0.42	-0.4
5,069,268	-		PFLU_RS22525	0.42	-0.2
5,069,268	-		PFLU_RS22525	0.42	+0.1
5,069,268	-		PFLU_RS22525	0.42	+1.8
5,069,268	-		PFLU_RS22525	0.42	-0.0
5,069,268	-		PFLU_RS22525	0.42	+0.4
5,069,268	-		PFLU_RS22525	0.42	+0.4
5,069,268	-		PFLU_RS22525	0.42	+1.5
5,069,268	-		PFLU_RS22525	0.42	+0.7
5,069,294	-		PFLU_RS22525	0.44	-0.2
5,069,390	+		PFLU_RS22525	0.52	+2.5
5,069,506	+		PFLU_RS22525	0.62	-0.3
5,069,506	+		PFLU_RS22525	0.62	-0.5
5,069,507	-		PFLU_RS22525	0.62	+0.7
5,069,507	-		PFLU_RS22525	0.62	+1.0
5,069,507	-		PFLU_RS22525	0.62	+0.8
5,069,507	-		PFLU_RS22525	0.62	+0.0
5,069,507	-		PFLU_RS22525	0.62	-1.3
5,069,507	-		PFLU_RS22525	0.62	-0.7
5,069,507	-		PFLU_RS22525	0.62	+0.1
5,069,507	-		PFLU_RS22525	0.62	-0.2
5,069,508	+		PFLU_RS22525	0.62	+0.3
5,069,508	+		PFLU_RS22525	0.62	+0.7
5,069,508	+		PFLU_RS22525	0.62	-2.3
5,069,508	+		PFLU_RS22525	0.62	+0.3
5,069,508	+		PFLU_RS22525	0.62	+1.6
5,069,509	-		PFLU_RS22525	0.62	+0.8
5,069,509	-		PFLU_RS22525	0.62	+0.1
5,069,509	-		PFLU_RS22525	0.62	-0.5
5,069,509	-		PFLU_RS22525	0.62	-0.2
5,069,643	+		PFLU_RS22525	0.74	+1.3
5,069,644	-		PFLU_RS22525	0.74	-0.0
5,069,653	+		PFLU_RS22525	0.75	+0.3
5,069,653	+		PFLU_RS22525	0.75	+0.7
5,069,684	-		PFLU_RS22525	0.77	+0.3
5,069,802	+		PFLU_RS22525	0.87	+0.7
5,069,803	-		PFLU_RS22525	0.87	-0.7
5,069,850	+				-0.6
5,069,850	+				+1.0
5,069,851	-				+0.0
5,069,851	-				-0.5
5,069,851	-				-0.0
5,069,953	+				-2.5
5,069,954	-				+0.7
5,069,990	+				+1.1
5,069,990	+				-1.3
5,069,990	+				-0.0
5,069,990	+				-0.0
5,069,990	+				+0.1
5,069,990	+				+0.6
5,069,990	+				-0.4
5,069,991	-				+0.9
5,069,991	-				+0.6
5,069,991	-				-0.2
5,069,998	-				-0.9
5,070,167	+		PFLU_RS22530	0.51	-0.4
5,070,167	+		PFLU_RS22530	0.51	+1.3
5,070,167	+		PFLU_RS22530	0.51	+0.7
5,070,167	+		PFLU_RS22530	0.51	+0.7
5,070,168	-		PFLU_RS22530	0.51	+0.3
5,070,168	-		PFLU_RS22530	0.51	-0.2
5,070,168	-		PFLU_RS22530	0.51	+0.3
5,070,226	-		PFLU_RS22530	0.68	-2.0
5,070,327	+				-0.1
5,070,351	+				+0.0
5,070,351	+				+0.3
5,070,351	+				+0.1
5,070,351	+				+2.3
5,070,351	+				-0.3
5,070,352	-				+1.3
5,070,352	-				+0.1
5,070,352	-				+0.3
5,070,352	-				+0.3
5,070,352	-				-0.7
5,070,352	-				-0.5
5,070,352	-				+1.0
5,070,352	-				-0.2
5,070,352	-				+0.5
5,070,355	+				-0.2
5,070,355	+				-0.7
5,070,355	+				+0.1
5,070,355	+				-1.1
5,070,355	+				+1.0
5,070,355	+				-1.5
5,070,355	+				+0.4
5,070,355	+				-0.3
5,070,355	+				-1.0
5,070,355	+				+0.3
5,070,355	+				+1.3
5,070,355	+				+0.5
5,070,356	-				-0.7
5,070,356	-				-1.3
5,070,356	-				-0.2
5,070,356	-				-0.9
5,070,356	-				+0.9
5,070,356	-				-0.1
5,070,356	-				-0.2
5,070,356	-				-1.2
5,070,356	-				-0.2
5,070,356	-				-1.5
5,070,356	-				-0.7
5,070,356	-				+0.1
5,070,356	-				+0.3
5,070,359	-				+0.1
5,070,374	-				+1.6
5,070,374	-				+0.3
5,070,374	-				+0.1
5,070,381	+				-0.7
5,070,462	+				-0.3
5,070,462	+				-1.7
5,070,462	+				+1.3
5,070,462	+				-1.0
5,070,462	+				+0.3
5,070,463	-				+0.0
5,070,463	-				-0.4
5,070,463	-				-0.7
5,070,486	+				-2.2
5,070,486	+				+0.1
5,070,486	+				+1.5
5,070,486	+				-1.4
5,070,487	-				+0.9
5,070,487	-				-2.0
5,070,523	+				-0.4
5,070,523	+				-0.4
5,070,523	+				-1.2
5,070,523	+				+1.1
5,070,523	+				+0.9
5,070,524	-				+0.1
5,070,524	-				-0.7
5,070,524	-				+0.7
5,070,524	-				+0.4
5,070,525	+				-0.5
5,070,525	+				-0.8
5,070,525	+				+1.0
5,070,526	-				+0.2
5,070,526	-				+1.3
5,070,526	-				-0.3
5,070,526	-				-0.3
5,070,526	-				+0.0
5,070,526	-				+0.7
5,070,526	-				-2.0
5,070,526	-				+1.0
5,070,526	-				-0.4
5,070,527	+				-0.6
5,070,527	+				+0.1
5,070,527	+				+0.4
5,070,527	+				-0.6
5,070,527	+				+0.7
5,070,528	-				-0.2
5,070,528	-				-0.8
5,070,528	-				-0.1
5,070,528	-				+0.7
5,070,528	-				-0.2
5,070,528	-				-0.4
5,070,528	-				+0.8
5,070,528	-				-0.0
5,070,528	-				-0.6
5,070,528	-				+0.4
5,070,528	-				+1.4
5,070,566	+				+0.6
5,070,566	+				+0.5
5,070,567	-				+0.0
5,070,567	-				-0.0
5,070,567	-				+0.1
5,070,573	+				+0.1
5,070,573	+				-1.6
5,070,573	+				+1.0
5,070,573	+				-0.8
5,070,573	+				-0.2
5,070,573	+				+0.9
5,070,573	+				+0.7
5,070,573	+				+2.3
5,070,573	+				+0.3
5,070,573	+				-1.0
5,070,573	+				-0.5
5,070,573	+				+0.7
5,070,573	+				+0.3
5,070,573	+				+0.3
5,070,574	-				-0.7
5,070,574	-				+0.5
5,070,574	-				-0.3
5,070,574	-				+0.3
5,070,574	-				+1.5
5,070,574	-				+0.3
5,070,574	-				+0.4
5,070,574	-				-0.5
5,070,574	-				+1.8
5,070,574	-				+0.7
5,070,579	+				-0.1
5,070,580	-				+0.9
5,070,580	-				-0.1
5,070,580	-				-0.7
5,070,580	-				+1.0
5,070,580	-				+0.1
5,070,580	-				-0.7
5,070,580	-				-0.9
5,070,596	+				+0.5
5,070,597	-				+0.1
5,070,597	-				+0.2
5,070,597	-				+0.2
5,070,599	+				+0.4
5,070,599	+				+0.0
5,070,599	+				+0.2
5,070,599	+				+0.3
5,070,599	+				+0.4
5,070,599	+				-0.9
5,070,600	-				+1.0
5,070,600	-				-1.0
5,070,654	+				-0.3
5,070,655	-				+0.1
5,070,655	-				+0.5
5,070,655	-				-1.5
5,070,810	+		PFLU_RS22535	0.16	-1.5
5,070,817	+		PFLU_RS22535	0.17	-0.2
5,070,817	+		PFLU_RS22535	0.17	+0.9
5,070,817	+		PFLU_RS22535	0.17	+0.2
5,070,817	+		PFLU_RS22535	0.17	-0.3
5,070,817	+		PFLU_RS22535	0.17	-0.2
5,070,817	+		PFLU_RS22535	0.17	+0.5
5,070,817	+		PFLU_RS22535	0.17	+1.2
5,070,817	+		PFLU_RS22535	0.17	-0.4
5,070,817	+		PFLU_RS22535	0.17	-0.9
5,070,817	+		PFLU_RS22535	0.17	+0.4
5,070,818	-		PFLU_RS22535	0.17	+0.3
5,070,818	-		PFLU_RS22535	0.17	+2.3
5,070,818	-		PFLU_RS22535	0.17	+0.1
5,070,818	-		PFLU_RS22535	0.17	+0.1
5,070,818	-		PFLU_RS22535	0.17	-0.5
5,070,818	-		PFLU_RS22535	0.17	-0.5
5,070,818	-		PFLU_RS22535	0.17	-0.6
5,070,818	-		PFLU_RS22535	0.17	-0.0
5,070,818	-		PFLU_RS22535	0.17	-0.3
5,070,818	-		PFLU_RS22535	0.17	+0.6
5,070,818	-		PFLU_RS22535	0.17	+0.9
5,070,868	+		PFLU_RS22535	0.20	-0.3
5,070,868	+		PFLU_RS22535	0.20	-0.5
5,070,913	+		PFLU_RS22535	0.23	-0.5
5,070,913	+		PFLU_RS22535	0.23	-0.5
5,071,253	+		PFLU_RS22535	0.46	-1.4
5,071,253	+		PFLU_RS22535	0.46	+0.2
5,071,253	+		PFLU_RS22535	0.46	+0.2
5,071,253	+		PFLU_RS22535	0.46	+0.2
5,071,253	+		PFLU_RS22535	0.46	+0.0
5,071,253	+		PFLU_RS22535	0.46	-1.3
5,071,253	+		PFLU_RS22535	0.46	+0.4
5,071,253	+		PFLU_RS22535	0.46	+0.5
5,071,253	+		PFLU_RS22535	0.46	-0.1
5,071,253	+		PFLU_RS22535	0.46	+0.8
5,071,253	+		PFLU_RS22535	0.46	-0.2
5,071,253	+		PFLU_RS22535	0.46	+0.3
5,071,254	-		PFLU_RS22535	0.47	+1.1
5,071,254	-		PFLU_RS22535	0.47	-0.0
5,071,254	-		PFLU_RS22535	0.47	-0.6
5,071,254	-		PFLU_RS22535	0.47	-0.6
5,071,254	-		PFLU_RS22535	0.47	-1.2
5,071,254	-		PFLU_RS22535	0.47	+0.9
5,071,254	-		PFLU_RS22535	0.47	+0.1
5,071,254	-		PFLU_RS22535	0.47	-0.1
5,071,254	-		PFLU_RS22535	0.47	+0.4
5,071,254	-		PFLU_RS22535	0.47	-0.7
5,071,254	-		PFLU_RS22535	0.47	+0.3
5,071,254	-		PFLU_RS22535	0.47	+1.3
5,071,254	-		PFLU_RS22535	0.47	-0.4
5,071,254	-		PFLU_RS22535	0.47	+1.1
5,071,254	-		PFLU_RS22535	0.47	+0.9
5,071,254	-		PFLU_RS22535	0.47	-0.5
5,071,254	-		PFLU_RS22535	0.47	+0.7
5,071,258	+		PFLU_RS22535	0.47	-0.2
5,071,258	+		PFLU_RS22535	0.47	+0.4
5,071,258	+		PFLU_RS22535	0.47	+0.3
5,071,258	+		PFLU_RS22535	0.47	+0.7
5,071,258	+		PFLU_RS22535	0.47	+0.7
5,071,258	+		PFLU_RS22535	0.47	+1.0
5,071,259	-		PFLU_RS22535	0.47	+0.3
5,071,259	-		PFLU_RS22535	0.47	+0.9
5,071,259	-		PFLU_RS22535	0.47	+1.1
5,071,259	-		PFLU_RS22535	0.47	-0.2
5,071,259	-		PFLU_RS22535	0.47	-2.5
5,071,259	-		PFLU_RS22535	0.47	+0.3
5,071,259	-		PFLU_RS22535	0.47	-0.2