Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21835

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
4,915,091	+		PFLU_RS21830	0.40	+0.7
4,915,091	+		PFLU_RS21830	0.40	+1.2
4,915,091	+		PFLU_RS21830	0.40	-0.2
4,915,091	+		PFLU_RS21830	0.40	-0.1
4,915,092	-		PFLU_RS21830	0.40	-0.5
4,915,092	-		PFLU_RS21830	0.40	+0.8
4,915,092	-		PFLU_RS21830	0.40	-0.2
4,915,092	-		PFLU_RS21830	0.40	+0.5
4,915,092	-		PFLU_RS21830	0.40	+0.2
4,915,092	-		PFLU_RS21830	0.40	-0.9
4,915,094	+		PFLU_RS21830	0.40	+1.5
4,915,094	+		PFLU_RS21830	0.40	+0.4
4,915,094	+		PFLU_RS21830	0.40	+1.2
4,915,095	-		PFLU_RS21830	0.40	+0.5
4,915,095	-		PFLU_RS21830	0.40	+0.4
4,915,095	-		PFLU_RS21830	0.40	-0.4
4,915,095	-		PFLU_RS21830	0.40	+1.3
4,915,184	+		PFLU_RS21830	0.45	+0.9
4,915,259	+		PFLU_RS21830	0.50	+2.0
4,915,259	+		PFLU_RS21830	0.50	+0.6
4,915,259	+		PFLU_RS21830	0.50	+0.2
4,915,259	+		PFLU_RS21830	0.50	+0.1
4,915,260	-		PFLU_RS21830	0.50	+0.8
4,915,260	-		PFLU_RS21830	0.50	+1.4
4,915,260	-		PFLU_RS21830	0.50	+1.2
4,915,260	-		PFLU_RS21830	0.50	+0.8
4,915,260	-		PFLU_RS21830	0.50	+1.8
4,915,295	+		PFLU_RS21830	0.52	+0.2
4,915,295	+		PFLU_RS21830	0.52	-0.4
4,915,295	+		PFLU_RS21830	0.52	-0.3
4,915,295	+		PFLU_RS21830	0.52	-0.3
4,915,295	+		PFLU_RS21830	0.52	+0.5
4,915,295	+		PFLU_RS21830	0.52	+1.2
4,915,295	+		PFLU_RS21830	0.52	-0.2
4,915,295	+		PFLU_RS21830	0.52	+0.1
4,915,295	+		PFLU_RS21830	0.52	+0.7
4,915,296	-		PFLU_RS21830	0.52	+0.5
4,915,296	-		PFLU_RS21830	0.52	+0.4
4,915,296	-		PFLU_RS21830	0.52	+0.5
4,915,327	+		PFLU_RS21830	0.54	+1.2
4,915,327	+		PFLU_RS21830	0.54	-1.5
4,915,328	-		PFLU_RS21830	0.54	+0.1
4,915,328	-		PFLU_RS21830	0.54	-0.8
4,915,328	-		PFLU_RS21830	0.54	+0.1
4,915,344	-		PFLU_RS21830	0.55	+0.6
4,915,357	+		PFLU_RS21830	0.56	-1.1
4,915,357	+		PFLU_RS21830	0.56	-0.0
4,915,357	+		PFLU_RS21830	0.56	-0.1
4,915,358	-		PFLU_RS21830	0.56	-0.1
4,915,358	-		PFLU_RS21830	0.56	-0.6
4,915,358	-		PFLU_RS21830	0.56	-0.2
4,915,358	-		PFLU_RS21830	0.56	+0.8
4,915,358	-		PFLU_RS21830	0.56	+0.6
4,915,387	+		PFLU_RS21830	0.58	-1.2
4,915,387	+		PFLU_RS21830	0.58	-0.2
4,915,387	+		PFLU_RS21830	0.58	-0.8
4,915,387	+		PFLU_RS21830	0.58	+0.2
4,915,387	+		PFLU_RS21830	0.58	-0.8
4,915,388	-		PFLU_RS21830	0.58	+2.0
4,915,388	-		PFLU_RS21830	0.58	+1.2
4,915,388	-		PFLU_RS21830	0.58	-1.1
4,915,388	-		PFLU_RS21830	0.58	-1.1
4,915,388	-		PFLU_RS21830	0.58	+0.2
4,915,486	+		PFLU_RS21830	0.64	-0.5
4,915,486	+		PFLU_RS21830	0.64	-0.2
4,915,486	+		PFLU_RS21830	0.64	+0.9
4,915,486	+		PFLU_RS21830	0.64	-0.1
4,915,486	+		PFLU_RS21830	0.64	-0.0
4,915,486	+		PFLU_RS21830	0.64	-0.3
4,915,486	+		PFLU_RS21830	0.64	-0.4
4,915,486	+		PFLU_RS21830	0.64	-0.3
4,915,486	+		PFLU_RS21830	0.64	-0.6
4,915,486	+		PFLU_RS21830	0.64	-1.0
4,915,487	-		PFLU_RS21830	0.64	+0.5
4,915,487	-		PFLU_RS21830	0.64	-0.0
4,915,487	-		PFLU_RS21830	0.64	+3.3
4,915,487	-		PFLU_RS21830	0.64	+1.2
4,915,487	-		PFLU_RS21830	0.64	+0.7
4,915,606	+		PFLU_RS21830	0.71	-1.6
4,915,606	+		PFLU_RS21830	0.71	-0.5
4,915,606	+		PFLU_RS21830	0.71	+0.0
4,915,606	+		PFLU_RS21830	0.71	+1.0
4,915,606	+		PFLU_RS21830	0.71	+0.2
4,915,606	+		PFLU_RS21830	0.71	+0.9
4,915,606	+		PFLU_RS21830	0.71	+0.5
4,915,607	-		PFLU_RS21830	0.71	-1.1
4,915,607	-		PFLU_RS21830	0.71	+1.0
4,915,607	-		PFLU_RS21830	0.71	+0.4
4,915,607	-		PFLU_RS21830	0.71	+1.9
4,915,607	-		PFLU_RS21830	0.71	-0.3
4,915,607	-		PFLU_RS21830	0.71	-0.6
4,915,607	-		PFLU_RS21830	0.71	-0.1
4,915,607	-		PFLU_RS21830	0.71	+1.0
4,915,607	-		PFLU_RS21830	0.71	+0.5
4,915,607	-		PFLU_RS21830	0.71	-0.9
4,915,607	-		PFLU_RS21830	0.71	+0.5
4,915,607	-		PFLU_RS21830	0.71	-0.7
4,915,607	-		PFLU_RS21830	0.71	+0.1
4,915,612	+		PFLU_RS21830	0.72	+0.6
4,915,612	+		PFLU_RS21830	0.72	+0.3
4,915,612	+		PFLU_RS21830	0.72	+1.4
4,915,612	+		PFLU_RS21830	0.72	+1.5
4,915,612	+		PFLU_RS21830	0.72	+1.5
4,915,612	+		PFLU_RS21830	0.72	+1.0
4,915,612	+		PFLU_RS21830	0.72	+0.2
4,915,612	+		PFLU_RS21830	0.72	+0.1
4,915,612	+		PFLU_RS21830	0.72	-0.4
4,915,612	+		PFLU_RS21830	0.72	-0.4
4,915,612	+		PFLU_RS21830	0.72	+0.0
4,915,612	+		PFLU_RS21830	0.72	+0.7
4,915,612	+		PFLU_RS21830	0.72	+0.4
4,915,612	+		PFLU_RS21830	0.72	-0.4
4,915,612	+		PFLU_RS21830	0.72	-1.6
4,915,612	+		PFLU_RS21830	0.72	-0.2
4,915,612	+		PFLU_RS21830	0.72	+0.0
4,915,613	-		PFLU_RS21830	0.72	+0.5
4,915,613	-		PFLU_RS21830	0.72	+2.2
4,915,613	-		PFLU_RS21830	0.72	+1.8
4,915,613	-		PFLU_RS21830	0.72	+0.7
4,915,613	-		PFLU_RS21830	0.72	+0.3
4,915,613	-		PFLU_RS21830	0.72	+0.8
4,915,613	-		PFLU_RS21830	0.72	+1.1
4,915,613	-		PFLU_RS21830	0.72	-0.4
4,915,613	-		PFLU_RS21830	0.72	+0.2
4,915,613	-		PFLU_RS21830	0.72	-0.0
4,915,613	-		PFLU_RS21830	0.72	-0.3
4,915,613	-		PFLU_RS21830	0.72	-2.2
4,915,613	-		PFLU_RS21830	0.72	+0.2
4,915,613	-		PFLU_RS21830	0.72	+0.1
4,915,613	-		PFLU_RS21830	0.72	-0.2
4,915,613	-		PFLU_RS21830	0.72	+0.4
4,915,613	-		PFLU_RS21830	0.72	-0.3
4,915,613	-		PFLU_RS21830	0.72	+0.3
4,915,613	-		PFLU_RS21830	0.72	+0.6
4,915,613	-		PFLU_RS21830	0.72	+0.3
4,915,613	-		PFLU_RS21830	0.72	+0.7
4,915,613	-		PFLU_RS21830	0.72	-0.2
4,915,627	+		PFLU_RS21830	0.73	+0.8
4,915,628	+		PFLU_RS21830	0.73	-0.3
4,915,628	+		PFLU_RS21830	0.73	-0.5
4,915,629	-		PFLU_RS21830	0.73	+0.7
4,915,629	-		PFLU_RS21830	0.73	+0.1
4,915,629	-		PFLU_RS21830	0.73	+0.7
4,915,629	-		PFLU_RS21830	0.73	+1.9
4,915,629	-		PFLU_RS21830	0.73	+0.4
4,915,629	-		PFLU_RS21830	0.73	+0.2
4,915,629	-		PFLU_RS21830	0.73	-0.5
4,915,629	-		PFLU_RS21830	0.73	+1.2
4,915,629	-		PFLU_RS21830	0.73	-0.7
4,915,629	-		PFLU_RS21830	0.73	-1.8
4,915,629	-		PFLU_RS21830	0.73	+0.7
4,915,636	+		PFLU_RS21830	0.73	-0.5
4,915,636	+		PFLU_RS21830	0.73	+0.7
4,915,636	+		PFLU_RS21830	0.73	+0.6
4,915,636	+		PFLU_RS21830	0.73	-0.0
4,915,636	+		PFLU_RS21830	0.73	-0.3
4,915,636	+		PFLU_RS21830	0.73	-0.5
4,915,636	+		PFLU_RS21830	0.73	+0.3
4,915,637	-		PFLU_RS21830	0.73	+0.3
4,915,637	-		PFLU_RS21830	0.73	+0.6
4,915,637	-		PFLU_RS21830	0.73	-0.8
4,915,637	-		PFLU_RS21830	0.73	+0.3
4,915,637	-		PFLU_RS21830	0.73	+0.6
4,915,672	+		PFLU_RS21830	0.75	+0.2
4,915,672	+		PFLU_RS21830	0.75	+0.9
4,915,672	+		PFLU_RS21830	0.75	+1.2
4,915,672	+		PFLU_RS21830	0.75	-0.5
4,915,672	+		PFLU_RS21830	0.75	+0.0
4,915,672	+		PFLU_RS21830	0.75	+0.2
4,915,672	+		PFLU_RS21830	0.75	+1.4
4,915,672	+		PFLU_RS21830	0.75	+2.2
4,915,672	+		PFLU_RS21830	0.75	+0.8
4,915,672	+		PFLU_RS21830	0.75	-0.8
4,915,672	+		PFLU_RS21830	0.75	-0.1
4,915,672	+		PFLU_RS21830	0.75	-0.1
4,915,672	+		PFLU_RS21830	0.75	+0.6
4,915,672	+		PFLU_RS21830	0.75	+0.7
4,915,672	+		PFLU_RS21830	0.75	-0.1
4,915,673	-		PFLU_RS21830	0.76	-1.0
4,915,673	-		PFLU_RS21830	0.76	-0.0
4,915,673	-		PFLU_RS21830	0.76	+0.7
4,915,673	-		PFLU_RS21830	0.76	-0.8
4,915,673	-		PFLU_RS21830	0.76	+1.1
4,915,874	+		PFLU_RS21830	0.88	+0.8
4,915,874	+		PFLU_RS21830	0.88	-0.0
4,915,874	+		PFLU_RS21830	0.88	+1.9
4,915,875	-		PFLU_RS21830	0.88	+0.4
4,915,898	+		PFLU_RS21830	0.89	-0.4
4,915,898	+		PFLU_RS21830	0.89	-0.2
4,915,898	+		PFLU_RS21830	0.89	-0.0
4,915,898	+		PFLU_RS21830	0.89	+0.7
4,915,898	+		PFLU_RS21830	0.89	+1.0
4,915,898	+		PFLU_RS21830	0.89	-1.4
4,915,898	+		PFLU_RS21830	0.89	-0.1
4,915,899	-		PFLU_RS21830	0.89	-0.5
4,915,899	-		PFLU_RS21830	0.89	+1.2
4,915,899	-		PFLU_RS21830	0.89	+0.5
4,915,899	-		PFLU_RS21830	0.89	+0.8
4,915,899	-		PFLU_RS21830	0.89	+0.8
4,915,899	-		PFLU_RS21830	0.89	-0.1
4,915,899	-		PFLU_RS21830	0.89	+0.2
4,915,899	-		PFLU_RS21830	0.89	+0.5
4,915,899	-		PFLU_RS21830	0.89	+0.4
4,915,899	-		PFLU_RS21830	0.89	+0.5
4,915,899	-		PFLU_RS21830	0.89	+1.0
4,915,899	-		PFLU_RS21830	0.89	-0.7
4,915,899	-		PFLU_RS21830	0.89	+0.1
4,915,899	-		PFLU_RS21830	0.89	-0.4
4,915,899	-		PFLU_RS21830	0.89	+0.2
4,915,962	+				+0.8
4,915,963	-				-1.5
4,915,963	-				-1.1
4,915,963	-				+0.8
4,915,998	+				-0.4
4,915,998	+				-0.3
4,915,999	-				+0.1
4,915,999	-				+0.0
4,916,001	+				-0.0
4,916,001	+				+0.2
4,916,001	+				+1.0
4,916,002	-				-1.3
4,916,002	-				+0.0
4,916,002	-				+0.3
4,916,002	-				+0.2
4,916,011	+				+0.5
4,916,011	+				-2.1
4,916,011	+				+2.2
4,916,011	+				+0.1
4,916,011	+				+2.2
4,916,011	+				-0.6
4,916,011	+				+0.3
4,916,012	-				-0.5
4,916,012	-				-0.9
4,916,012	-				-0.4
4,916,012	-				+0.3
4,916,012	-				-0.8
4,916,012	-				+0.3
4,916,012	-				-0.2
4,916,012	-				+0.3
4,916,023	+				+0.5
4,916,023	+				-0.6
4,916,024	-				+1.4
4,916,024	-				-0.1
4,916,024	-				+1.7
4,916,024	-				-0.4
4,916,024	-				-0.0
4,916,024	-				+0.4
4,916,024	-				+0.5
4,916,024	-				+0.6
4,916,047	+				+0.0
4,916,047	+				-0.4
4,916,047	+				+0.9
4,916,047	+				-0.8
4,916,048	-				+0.5
4,916,048	-				+0.2
4,916,048	-				+0.5
4,916,048	-				+0.2
4,916,057	+				+0.3
4,916,057	+				+0.5
4,916,092	+				+0.9
4,916,092	+				+0.4
4,916,092	+				+0.2
4,916,092	+				+0.4
4,916,092	+				+0.7
4,916,092	+				-0.2
4,916,093	-				-0.6
4,916,093	-				-0.3
4,916,093	-				+0.6
4,916,093	-				-0.3
4,916,093	-				+0.3
4,916,093	-				+1.3
4,916,095	+				+0.6
4,916,095	+				-0.5
4,916,095	+				+0.2
4,916,096	-				-0.3
4,916,096	-				-1.2
4,916,096	-				+0.9
4,916,096	-				+0.5
4,916,096	-				-0.8
4,916,151	+				+1.1
4,916,151	+				-0.6
4,916,151	+				+1.1
4,916,151	+				-1.0
4,916,151	+				-1.0
4,916,151	+				+1.1
4,916,151	+				+1.0
4,916,151	+				-0.4
4,916,151	+				+0.3
4,916,151	+				+0.1
4,916,151	+				+3.5
4,916,151	+				+1.0
4,916,151	+				+0.3
4,916,151	+				+1.0
4,916,151	+				+0.3
4,916,151	+				+0.9
4,916,151	+				+0.1
4,916,152	-				-0.6
4,916,152	-				+0.3
4,916,152	-				+0.2
4,916,152	-				+0.2
4,916,152	-				+0.5
4,916,152	-				+0.2
4,916,152	-				+1.0
4,916,152	-				+0.2
4,916,152	-				-0.0
4,916,152	-				-0.6
4,916,152	-				+0.8
4,916,152	-				+0.4
4,916,152	-				+1.9
4,916,152	-				+0.1
4,916,152	-				+1.2
4,916,152	-				+0.9
4,916,154	+				-2.6
4,916,155	-				+1.3
4,916,155	-				-0.4
4,916,155	-				-0.1
4,916,555	-		PFLU_RS21835	0.23	+0.3
4,916,617	+		PFLU_RS21835	0.26	-0.3
4,916,617	+		PFLU_RS21835	0.26	+0.4
4,916,617	+		PFLU_RS21835	0.26	+0.5
4,916,617	+		PFLU_RS21835	0.26	+0.3
4,916,617	+		PFLU_RS21835	0.26	-0.9
4,916,617	+		PFLU_RS21835	0.26	+0.7
4,916,618	-		PFLU_RS21835	0.26	+0.0
4,916,618	-		PFLU_RS21835	0.26	+1.2
4,916,618	-		PFLU_RS21835	0.26	+0.6
4,916,619	+		PFLU_RS21835	0.26	-2.7
4,916,619	+		PFLU_RS21835	0.26	+0.9
4,916,619	+		PFLU_RS21835	0.26	+1.3
4,916,619	+		PFLU_RS21835	0.26	+1.0
4,916,619	+		PFLU_RS21835	0.26	+0.6
4,916,619	+		PFLU_RS21835	0.26	+0.9
4,916,619	+		PFLU_RS21835	0.26	+0.5
4,916,619	+		PFLU_RS21835	0.26	+0.3
4,916,619	+		PFLU_RS21835	0.26	+0.6
4,916,619	+		PFLU_RS21835	0.26	-0.9
4,916,619	+		PFLU_RS21835	0.26	+0.5
4,916,619	+		PFLU_RS21835	0.26	+1.0
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4,916,619	+		PFLU_RS21835	0.26	+1.1
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4,916,619	+		PFLU_RS21835	0.26	+1.0
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4,916,619	+		PFLU_RS21835	0.26	+1.0
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4,917,239	-		PFLU_RS21835	0.56	+1.1
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