Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21815

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
4,910,103	+		PFLU_RS21810	0.35	+0.4
4,910,104	-		PFLU_RS21810	0.35	+0.5
4,910,162	+		PFLU_RS21810	0.39	-0.4
4,910,162	+		PFLU_RS21810	0.39	-0.2
4,910,162	+		PFLU_RS21810	0.39	+0.2
4,910,162	+		PFLU_RS21810	0.39	+0.6
4,910,162	+		PFLU_RS21810	0.39	-0.8
4,910,162	+		PFLU_RS21810	0.39	+0.4
4,910,162	+		PFLU_RS21810	0.39	-0.6
4,910,162	+		PFLU_RS21810	0.39	-2.2
4,910,162	+		PFLU_RS21810	0.39	+0.3
4,910,162	+		PFLU_RS21810	0.39	-0.2
4,910,162	+		PFLU_RS21810	0.39	+1.5
4,910,162	+		PFLU_RS21810	0.39	-0.1
4,910,162	+		PFLU_RS21810	0.39	+0.9
4,910,162	+		PFLU_RS21810	0.39	-0.7
4,910,162	+		PFLU_RS21810	0.39	-0.5
4,910,162	+		PFLU_RS21810	0.39	+0.2
4,910,162	+		PFLU_RS21810	0.39	-0.2
4,910,163	-		PFLU_RS21810	0.39	+0.4
4,910,163	-		PFLU_RS21810	0.39	+0.3
4,910,163	-		PFLU_RS21810	0.39	+1.9
4,910,163	-		PFLU_RS21810	0.39	-0.4
4,910,163	-		PFLU_RS21810	0.39	+0.5
4,910,163	-		PFLU_RS21810	0.39	-0.9
4,910,163	-		PFLU_RS21810	0.39	+0.3
4,910,163	-		PFLU_RS21810	0.39	-1.1
4,910,163	-		PFLU_RS21810	0.39	-0.4
4,910,163	-		PFLU_RS21810	0.39	+0.4
4,910,163	-		PFLU_RS21810	0.39	+1.1
4,910,163	-		PFLU_RS21810	0.39	+1.6
4,910,163	-		PFLU_RS21810	0.39	+0.8
4,910,163	-		PFLU_RS21810	0.39	+0.5
4,910,163	-		PFLU_RS21810	0.39	+0.6
4,910,163	-		PFLU_RS21810	0.39	-1.6
4,910,163	-		PFLU_RS21810	0.39	+0.1
4,910,166	+		PFLU_RS21810	0.40	+1.1
4,910,167	-		PFLU_RS21810	0.40	+0.4
4,910,205	+		PFLU_RS21810	0.42	+0.8
4,910,205	+		PFLU_RS21810	0.42	+1.2
4,910,205	+		PFLU_RS21810	0.42	+0.3
4,910,206	-		PFLU_RS21810	0.43	+0.7
4,910,206	-		PFLU_RS21810	0.43	+0.6
4,910,211	+		PFLU_RS21810	0.43	+0.5
4,910,211	+		PFLU_RS21810	0.43	+0.5
4,910,211	+		PFLU_RS21810	0.43	+0.5
4,910,211	+		PFLU_RS21810	0.43	+0.2
4,910,211	+		PFLU_RS21810	0.43	-0.3
4,910,211	+		PFLU_RS21810	0.43	+1.4
4,910,211	+		PFLU_RS21810	0.43	+0.6
4,910,211	+		PFLU_RS21810	0.43	+1.0
4,910,211	+		PFLU_RS21810	0.43	+0.0
4,910,211	+		PFLU_RS21810	0.43	+0.9
4,910,211	+		PFLU_RS21810	0.43	+0.2
4,910,212	-		PFLU_RS21810	0.43	-3.0
4,910,212	-		PFLU_RS21810	0.43	+0.8
4,910,212	-		PFLU_RS21810	0.43	+0.4
4,910,212	-		PFLU_RS21810	0.43	+1.7
4,910,215	+		PFLU_RS21810	0.43	+2.5
4,910,215	+		PFLU_RS21810	0.43	+0.4
4,910,215	+		PFLU_RS21810	0.43	+1.2
4,910,215	+		PFLU_RS21810	0.43	+0.0
4,910,215	+		PFLU_RS21810	0.43	+1.0
4,910,215	+		PFLU_RS21810	0.43	-1.7
4,910,215	+		PFLU_RS21810	0.43	+1.4
4,910,215	+		PFLU_RS21810	0.43	-1.0
4,910,215	+		PFLU_RS21810	0.43	+1.4
4,910,215	+		PFLU_RS21810	0.43	-0.6
4,910,215	+		PFLU_RS21810	0.43	+0.8
4,910,215	+		PFLU_RS21810	0.43	+0.3
4,910,215	+		PFLU_RS21810	0.43	-0.2
4,910,215	+		PFLU_RS21810	0.43	+0.2
4,910,215	+		PFLU_RS21810	0.43	+0.4
4,910,215	+		PFLU_RS21810	0.43	+0.6
4,910,215	+		PFLU_RS21810	0.43	+0.4
4,910,215	+		PFLU_RS21810	0.43	+1.0
4,910,215	+		PFLU_RS21810	0.43	+0.4
4,910,215	+		PFLU_RS21810	0.43	+0.6
4,910,215	+		PFLU_RS21810	0.43	+2.5
4,910,215	+		PFLU_RS21810	0.43	+0.2
4,910,215	+		PFLU_RS21810	0.43	+0.6
4,910,215	+		PFLU_RS21810	0.43	+1.4
4,910,215	+		PFLU_RS21810	0.43	-0.0
4,910,215	+		PFLU_RS21810	0.43	+0.7
4,910,215	+		PFLU_RS21810	0.43	+1.6
4,910,216	-		PFLU_RS21810	0.43	+0.2
4,910,216	-		PFLU_RS21810	0.43	-1.1
4,910,216	-		PFLU_RS21810	0.43	-0.4
4,910,216	-		PFLU_RS21810	0.43	+0.4
4,910,216	-		PFLU_RS21810	0.43	+0.3
4,910,216	-		PFLU_RS21810	0.43	+0.3
4,910,216	-		PFLU_RS21810	0.43	+0.2
4,910,216	-		PFLU_RS21810	0.43	+0.1
4,910,216	-		PFLU_RS21810	0.43	-0.6
4,910,216	-		PFLU_RS21810	0.43	-0.2
4,910,216	-		PFLU_RS21810	0.43	-0.7
4,910,216	-		PFLU_RS21810	0.43	+0.6
4,910,216	-		PFLU_RS21810	0.43	-0.2
4,910,216	-		PFLU_RS21810	0.43	+1.0
4,910,216	-		PFLU_RS21810	0.43	+0.6
4,910,216	-		PFLU_RS21810	0.43	+1.4
4,910,216	-		PFLU_RS21810	0.43	+2.9
4,910,216	-		PFLU_RS21810	0.43	+0.5
4,910,216	-		PFLU_RS21810	0.43	+0.9
4,910,216	-		PFLU_RS21810	0.43	+0.3
4,910,247	+		PFLU_RS21810	0.45	+0.2
4,910,247	+		PFLU_RS21810	0.45	-0.3
4,910,247	+		PFLU_RS21810	0.45	+0.8
4,910,248	-		PFLU_RS21810	0.46	+0.4
4,910,248	-		PFLU_RS21810	0.46	+0.2
4,910,248	-		PFLU_RS21810	0.46	-0.2
4,910,298	+		PFLU_RS21810	0.49	-0.8
4,910,298	+		PFLU_RS21810	0.49	-0.6
4,910,299	-		PFLU_RS21810	0.49	+0.3
4,910,325	+		PFLU_RS21810	0.51	-0.1
4,910,366	+		PFLU_RS21810	0.54	-1.1
4,910,366	+		PFLU_RS21810	0.54	+0.6
4,910,366	+		PFLU_RS21810	0.54	+0.5
4,910,379	+		PFLU_RS21810	0.55	+0.5
4,910,380	-		PFLU_RS21810	0.55	+0.4
4,910,380	-		PFLU_RS21810	0.55	+0.2
4,910,380	-		PFLU_RS21810	0.55	+0.2
4,910,404	+		PFLU_RS21810	0.57	+0.5
4,910,404	+		PFLU_RS21810	0.57	-0.0
4,910,405	-		PFLU_RS21810	0.57	+0.5
4,910,421	+		PFLU_RS21810	0.58	-0.6
4,910,422	-		PFLU_RS21810	0.58	-0.7
4,910,535	+		PFLU_RS21810	0.66	-0.3
4,910,581	-		PFLU_RS21810	0.69	+0.6
4,910,581	-		PFLU_RS21810	0.69	+0.8
4,910,581	-		PFLU_RS21810	0.69	+0.0
4,910,591	+		PFLU_RS21810	0.70	+1.5
4,910,591	+		PFLU_RS21810	0.70	-0.0
4,910,591	+		PFLU_RS21810	0.70	+0.3
4,910,591	+		PFLU_RS21810	0.70	+0.2
4,910,591	+		PFLU_RS21810	0.70	-0.5
4,910,591	+		PFLU_RS21810	0.70	-1.3
4,910,591	+		PFLU_RS21810	0.70	+1.3
4,910,591	+		PFLU_RS21810	0.70	+0.5
4,910,592	-		PFLU_RS21810	0.70	+1.2
4,910,592	-		PFLU_RS21810	0.70	-0.5
4,910,592	-		PFLU_RS21810	0.70	+0.9
4,910,592	-		PFLU_RS21810	0.70	-1.2
4,910,592	-		PFLU_RS21810	0.70	+0.4
4,910,592	-		PFLU_RS21810	0.70	-0.4
4,910,652	+		PFLU_RS21810	0.74	+0.1
4,910,652	+		PFLU_RS21810	0.74	+0.2
4,910,652	+		PFLU_RS21810	0.74	+1.4
4,910,652	+		PFLU_RS21810	0.74	-0.3
4,910,652	+		PFLU_RS21810	0.74	-0.8
4,910,653	-		PFLU_RS21810	0.74	-0.2
4,910,653	-		PFLU_RS21810	0.74	-0.4
4,910,653	-		PFLU_RS21810	0.74	+0.3
4,910,653	-		PFLU_RS21810	0.74	+0.8
4,910,727	+		PFLU_RS21810	0.80	+0.0
4,910,727	+		PFLU_RS21810	0.80	+0.3
4,910,727	+		PFLU_RS21810	0.80	+0.9
4,910,728	-		PFLU_RS21810	0.80	+1.2
4,910,728	-		PFLU_RS21810	0.80	+2.2
4,910,728	-		PFLU_RS21810	0.80	+0.9
4,910,728	-		PFLU_RS21810	0.80	+1.6
4,910,728	-		PFLU_RS21810	0.80	-1.4
4,910,745	+		PFLU_RS21810	0.81	-0.2
4,910,745	+		PFLU_RS21810	0.81	-0.1
4,910,746	-		PFLU_RS21810	0.81	+0.2
4,910,820	+		PFLU_RS21810	0.86	-0.0
4,910,820	+		PFLU_RS21810	0.86	+1.1
4,910,820	+		PFLU_RS21810	0.86	-0.4
4,910,820	+		PFLU_RS21810	0.86	+0.5
4,910,820	+		PFLU_RS21810	0.86	-0.1
4,910,820	+		PFLU_RS21810	0.86	+0.8
4,910,820	+		PFLU_RS21810	0.86	-0.2
4,910,820	+		PFLU_RS21810	0.86	+0.8
4,910,820	+		PFLU_RS21810	0.86	+0.8
4,910,820	+		PFLU_RS21810	0.86	+0.3
4,910,820	+		PFLU_RS21810	0.86	+0.3
4,910,820	+		PFLU_RS21810	0.86	+0.1
4,910,821	-		PFLU_RS21810	0.86	+0.6
4,910,821	-		PFLU_RS21810	0.86	+0.9
4,910,821	-		PFLU_RS21810	0.86	+0.9
4,910,821	-		PFLU_RS21810	0.86	+1.1
4,910,821	-		PFLU_RS21810	0.86	+0.4
4,910,821	-		PFLU_RS21810	0.86	+0.8
4,910,865	+		PFLU_RS21810	0.89	+0.8
4,910,865	+		PFLU_RS21810	0.89	-0.2
4,910,865	+		PFLU_RS21810	0.89	-0.7
4,910,865	+		PFLU_RS21810	0.89	+0.5
4,910,865	+		PFLU_RS21810	0.89	+0.2
4,910,865	+		PFLU_RS21810	0.89	+0.9
4,910,865	+		PFLU_RS21810	0.89	-1.1
4,910,866	-		PFLU_RS21810	0.90	+0.8
4,910,866	-		PFLU_RS21810	0.90	+0.1
4,910,866	-		PFLU_RS21810	0.90	+0.8
4,910,866	-		PFLU_RS21810	0.90	+0.2
4,910,866	-		PFLU_RS21810	0.90	+0.3
4,910,866	-		PFLU_RS21810	0.90	+0.6
4,910,866	-		PFLU_RS21810	0.90	+1.2
4,910,866	-		PFLU_RS21810	0.90	+0.1
4,910,866	-		PFLU_RS21810	0.90	-0.5
4,910,869	+		PFLU_RS21810	0.90	+0.2
4,910,869	+		PFLU_RS21810	0.90	+0.0
4,910,870	-		PFLU_RS21810	0.90	+0.3
4,910,870	-		PFLU_RS21810	0.90	+1.9
4,910,870	-		PFLU_RS21810	0.90	+0.4
4,910,870	-		PFLU_RS21810	0.90	-0.0
4,910,870	-		PFLU_RS21810	0.90	+0.4
4,910,907	+				-1.1
4,910,995	+				-0.1
4,910,995	+				+0.8
4,910,996	-				+0.1
4,910,996	-				-0.8
4,910,996	-				+0.8
4,910,996	-				+0.5
4,910,996	-				-0.4
4,910,996	-				+1.0
4,910,996	-				-0.1
4,910,996	-				-0.5
4,910,996	-				+0.6
4,910,996	-				+2.2
4,911,042	+				-0.9
4,911,255	+		PFLU_RS21815	0.46	+0.2
4,911,255	+		PFLU_RS21815	0.46	-0.4
4,911,255	+		PFLU_RS21815	0.46	-0.0
4,911,255	+		PFLU_RS21815	0.46	+0.4
4,911,256	-		PFLU_RS21815	0.46	+1.0
4,911,256	-		PFLU_RS21815	0.46	+0.2
4,911,256	-		PFLU_RS21815	0.46	+1.6
4,911,333	+		PFLU_RS21815	0.68	+0.2
4,911,355	-		PFLU_RS21815	0.74	+0.2
4,911,355	-		PFLU_RS21815	0.74	-0.2
4,911,367	-		PFLU_RS21815	0.78	+1.1
4,911,414	-				+2.1
4,911,430	+				+0.4
4,911,430	+				-0.4
4,911,431	-				+0.2
4,911,431	-				+0.2
4,911,458	+				-0.4
4,911,458	+				-0.1
4,911,459	-				+1.2
4,911,499	+				+1.3
4,911,519	+				+0.6
4,911,519	+				-2.1
4,911,520	-				-0.4
4,911,520	-				-0.1
4,911,536	+				-0.8
4,911,537	-				+0.9
4,911,537	-				+0.7
4,911,556	+				-0.8
4,911,703	+		PFLU_RS21820	0.13	+0.8
4,911,704	-		PFLU_RS21820	0.13	-0.1
4,911,774	-		PFLU_RS21820	0.18	+1.0
4,911,774	-		PFLU_RS21820	0.18	-0.7
4,911,809	+		PFLU_RS21820	0.20	-1.1
4,911,809	+		PFLU_RS21820	0.20	+0.9
4,911,809	+		PFLU_RS21820	0.20	-0.4
4,911,810	-		PFLU_RS21820	0.20	-0.9
4,911,810	-		PFLU_RS21820	0.20	-0.1
4,911,810	-		PFLU_RS21820	0.20	-0.8
4,911,810	-		PFLU_RS21820	0.20	-1.1
4,911,810	-		PFLU_RS21820	0.20	-1.1
4,911,880	+		PFLU_RS21820	0.25	+0.7
4,911,880	+		PFLU_RS21820	0.25	-0.6
4,911,880	+		PFLU_RS21820	0.25	-0.6
4,911,881	-		PFLU_RS21820	0.25	+0.6
4,911,881	-		PFLU_RS21820	0.25	-0.0
4,911,906	+		PFLU_RS21820	0.27	+0.8
4,911,906	+		PFLU_RS21820	0.27	+0.9
4,911,907	-		PFLU_RS21820	0.27	-1.8
4,911,907	-		PFLU_RS21820	0.27	+0.6
4,911,907	-		PFLU_RS21820	0.27	-0.1
4,911,907	-		PFLU_RS21820	0.27	-2.4
4,911,979	+		PFLU_RS21820	0.32	-0.2
4,911,979	+		PFLU_RS21820	0.32	-1.7
4,911,980	-		PFLU_RS21820	0.32	+2.0
4,911,980	-		PFLU_RS21820	0.32	-0.2
4,911,980	-		PFLU_RS21820	0.32	-0.3
4,911,980	-		PFLU_RS21820	0.32	+0.2
4,911,993	+		PFLU_RS21820	0.33	-1.4
4,911,993	+		PFLU_RS21820	0.33	-0.4
4,911,993	+		PFLU_RS21820	0.33	+0.6
4,911,994	-		PFLU_RS21820	0.33	+1.4
4,911,994	-		PFLU_RS21820	0.33	+0.0
4,911,994	-		PFLU_RS21820	0.33	+0.6
4,912,021	+		PFLU_RS21820	0.34	+0.5
4,912,021	+		PFLU_RS21820	0.34	-0.1
4,912,022	-		PFLU_RS21820	0.35	-0.2
4,912,102	+		PFLU_RS21820	0.40	+1.2
4,912,102	+		PFLU_RS21820	0.40	+0.6
4,912,102	+		PFLU_RS21820	0.40	-0.0
4,912,103	-		PFLU_RS21820	0.40	-0.8
4,912,103	-		PFLU_RS21820	0.40	-0.4
4,912,103	-		PFLU_RS21820	0.40	-0.1
4,912,113	+		PFLU_RS21820	0.41	+0.6
4,912,113	+		PFLU_RS21820	0.41	+0.2
4,912,113	+		PFLU_RS21820	0.41	+3.8
4,912,114	-		PFLU_RS21820	0.41	-0.9
4,912,114	-		PFLU_RS21820	0.41	-0.4
4,912,114	-		PFLU_RS21820	0.41	-0.1
4,912,114	-		PFLU_RS21820	0.41	-1.8
4,912,114	-		PFLU_RS21820	0.41	+1.0
4,912,114	-		PFLU_RS21820	0.41	-0.6
4,912,114	-		PFLU_RS21820	0.41	-1.3
4,912,114	-		PFLU_RS21820	0.41	+2.0
4,912,114	-		PFLU_RS21820	0.41	+0.0
4,912,144	+		PFLU_RS21820	0.43	-1.2
4,912,144	+		PFLU_RS21820	0.43	+0.4
4,912,145	-		PFLU_RS21820	0.43	-0.2
4,912,182	-		PFLU_RS21820	0.46	+0.4
4,912,182	-		PFLU_RS21820	0.46	-0.1
4,912,182	-		PFLU_RS21820	0.46	-0.7
4,912,182	-		PFLU_RS21820	0.46	+1.2
4,912,195	+		PFLU_RS21820	0.46	+0.7
4,912,196	-		PFLU_RS21820	0.47	-2.0
4,912,196	-		PFLU_RS21820	0.47	-0.6
4,912,269	-		PFLU_RS21820	0.52	+1.6
4,912,269	-		PFLU_RS21820	0.52	-0.6
4,912,364	-		PFLU_RS21820	0.58	+0.2