Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21570

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
4,864,718	-		PFLU_RS21565	0.54	+0.9
4,864,718	-		PFLU_RS21565	0.54	+0.3
4,864,790	+		PFLU_RS21565	0.58	-2.0
4,864,790	+		PFLU_RS21565	0.58	+0.2
4,864,791	-		PFLU_RS21565	0.58	+1.8
4,864,811	+		PFLU_RS21565	0.59	-0.2
4,864,811	+		PFLU_RS21565	0.59	-0.3
4,864,811	+		PFLU_RS21565	0.59	+2.5
4,864,811	+		PFLU_RS21565	0.59	+0.2
4,864,812	-		PFLU_RS21565	0.59	+0.1
4,864,812	-		PFLU_RS21565	0.59	-0.9
4,864,812	-		PFLU_RS21565	0.59	+0.5
4,864,812	-		PFLU_RS21565	0.59	+1.0
4,864,837	+		PFLU_RS21565	0.61	-0.6
4,864,837	+		PFLU_RS21565	0.61	+0.8
4,864,837	+		PFLU_RS21565	0.61	+0.3
4,864,837	+		PFLU_RS21565	0.61	-0.5
4,864,837	+		PFLU_RS21565	0.61	-0.2
4,864,837	+		PFLU_RS21565	0.61	+0.3
4,864,837	+		PFLU_RS21565	0.61	-1.4
4,864,837	+		PFLU_RS21565	0.61	+0.1
4,864,837	+		PFLU_RS21565	0.61	-0.3
4,864,837	+		PFLU_RS21565	0.61	-1.4
4,864,838	-		PFLU_RS21565	0.61	+0.6
4,864,838	-		PFLU_RS21565	0.61	+1.8
4,864,838	-		PFLU_RS21565	0.61	+1.2
4,864,838	-		PFLU_RS21565	0.61	+0.1
4,864,838	-		PFLU_RS21565	0.61	+0.9
4,864,838	-		PFLU_RS21565	0.61	-0.1
4,864,838	-		PFLU_RS21565	0.61	+0.2
4,864,838	-		PFLU_RS21565	0.61	-0.2
4,864,838	-		PFLU_RS21565	0.61	+0.5
4,864,838	-		PFLU_RS21565	0.61	-1.3
4,864,838	-		PFLU_RS21565	0.61	-0.7
4,864,838	-		PFLU_RS21565	0.61	+0.7
4,864,987	-		PFLU_RS21565	0.69	+0.0
4,865,013	+		PFLU_RS21565	0.70	+0.8
4,865,067	+		PFLU_RS21565	0.73	-1.1
4,865,067	+		PFLU_RS21565	0.73	+1.2
4,865,067	+		PFLU_RS21565	0.73	+0.2
4,865,067	+		PFLU_RS21565	0.73	+1.9
4,865,068	-		PFLU_RS21565	0.73	-0.4
4,865,089	+		PFLU_RS21565	0.74	+1.3
4,865,089	+		PFLU_RS21565	0.74	-0.1
4,865,090	-		PFLU_RS21565	0.74	-0.1
4,865,090	-		PFLU_RS21565	0.74	-0.7
4,865,161	+		PFLU_RS21565	0.78	+0.1
4,865,162	-		PFLU_RS21565	0.78	-0.1
4,865,162	-		PFLU_RS21565	0.78	+0.1
4,865,162	-		PFLU_RS21565	0.78	-0.1
4,865,233	+		PFLU_RS21565	0.82	-0.0
4,865,241	-		PFLU_RS21565	0.82	+0.2
4,865,241	-		PFLU_RS21565	0.82	-0.5
4,865,275	+		PFLU_RS21565	0.84	+0.1
4,865,275	+		PFLU_RS21565	0.84	+0.9
4,865,275	+		PFLU_RS21565	0.84	+0.9
4,865,276	-		PFLU_RS21565	0.84	+0.6
4,865,276	-		PFLU_RS21565	0.84	-0.5
4,865,457	-				-1.1
4,865,561	+				+0.7
4,865,561	+				+0.3
4,865,561	+				-0.1
4,865,562	-				+0.1
4,865,562	-				+0.3
4,865,562	-				-0.1
4,865,575	+				-0.5
4,865,575	+				-0.7
4,865,576	-				-0.6
4,865,576	-				-1.0
4,865,581	+				+0.2
4,865,582	-				-0.8
4,865,582	-				+0.3
4,865,591	+				-0.9
4,865,592	-				+0.5
4,865,592	-				-0.0
4,865,592	-				+1.9
4,865,612	-				+1.7
4,865,634	+				-0.1
4,865,634	+				+0.4
4,865,668	-				+1.2
4,865,956	+		PFLU_RS21570	0.56	+0.2
4,865,956	+		PFLU_RS21570	0.56	+0.4
4,865,956	+		PFLU_RS21570	0.56	-0.6
4,865,957	-		PFLU_RS21570	0.57	+1.2
4,865,957	-		PFLU_RS21570	0.57	+0.2
4,865,957	-		PFLU_RS21570	0.57	+1.6
4,866,191	-				-0.2
4,866,215	+				+0.3
4,866,216	-				+2.8
4,866,216	-				-0.4
4,866,216	-				+0.9
4,866,261	+				-0.4
4,866,261	+				-0.0
4,866,261	+				-1.2
4,866,274	+				+1.2
4,866,275	-				-0.2
4,866,338	+		PFLU_RS21575	0.29	+0.2
4,866,338	+		PFLU_RS21575	0.29	-0.4
4,866,339	-		PFLU_RS21575	0.29	+0.5
4,866,517	+				-0.0
4,866,517	+				-0.9
4,866,517	+				-1.1
4,866,518	-				+0.3
4,866,518	-				+0.7
4,866,518	-				+0.7
4,866,518	-				+2.8
4,866,518	-				-0.4
4,866,592	+				+0.7
4,866,608	+				+0.1
4,866,608	+				-1.7
4,866,608	+				-0.8
4,866,608	+				-0.4
4,866,608	+				+0.7
4,866,609	-				+0.1
4,866,705	-		PFLU_RS21580	0.12	+0.0
4,866,771	+		PFLU_RS21580	0.20	+0.3
4,866,771	+		PFLU_RS21580	0.20	-0.5
4,867,190	+		PFLU_RS21580	0.72	+0.4