Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS20335

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
4,591,939	+				-0.9
4,591,939	+				+1.1
4,591,939	+				-0.1
4,591,940	-				+0.3
4,591,940	-				+1.4
4,591,941	+				+0.4
4,591,941	+				+0.1
4,591,941	+				+0.4
4,591,941	+				-1.4
4,591,941	+				+0.9
4,591,941	+				+0.0
4,591,941	+				+0.5
4,591,941	+				+0.1
4,591,941	+				-0.1
4,591,942	-				+0.5
4,591,942	-				-1.1
4,591,942	-				-0.1
4,591,942	-				+0.1
4,591,942	-				-0.5
4,591,942	-				+1.1
4,591,942	-				-0.1
4,591,942	-				+0.5
4,591,942	-				+1.1
4,591,942	-				+0.6
4,591,966	+				+0.7
4,591,966	+				+0.9
4,591,966	+				+0.5
4,591,966	+				-0.1
4,591,967	-				-0.3
4,591,967	-				-0.6
4,591,967	-				+0.9
4,591,967	-				-0.6
4,591,967	-				+0.4
4,591,967	-				+1.1
4,592,038	+				-0.7
4,592,038	+				+0.8
4,592,039	-				-0.7
4,592,308	+		PFLU_RS20325	0.89	+1.1
4,592,376	-				+0.8
4,592,386	+				-0.9
4,592,386	+				-0.1
4,592,386	+				-0.0
4,592,386	+				+0.1
4,592,387	-				-1.2
4,592,387	-				-0.7
4,592,387	-				-0.4
4,592,387	-				+0.3
4,592,410	-				+0.3
4,592,420	+				+1.8
4,592,421	-				+0.1
4,592,443	-				-0.6
4,592,443	-				+0.1
4,592,462	+				+0.9
4,592,492	+				-0.3
4,592,492	+				-1.2
4,592,493	-				+0.1
4,592,504	+				-0.2
4,592,505	-				-1.5
4,592,512	-				-0.6
4,592,556	+				-0.8
4,592,557	-				-0.5
4,592,557	-				-0.9
4,592,561	+				+0.7
4,592,599	+				+2.1
4,592,600	-				-0.1
4,592,600	-				+0.2
4,592,600	-				+0.7
4,592,608	+				-0.7
4,592,608	+				-0.5
4,592,608	+				+0.5
4,592,608	+				-2.9
4,592,608	+				-1.5
4,592,608	+				-1.2
4,592,609	-				+0.2
4,592,609	-				+0.5
4,592,609	-				-1.1
4,592,609	-				-0.8
4,592,609	-				-1.7
4,592,609	-				+0.1
4,592,609	-				+0.1
4,592,609	-				+0.3
4,592,609	-				-1.5
4,592,609	-				-1.5
4,592,609	-				-1.2
4,592,610	+				-1.2
4,592,610	+				+0.1
4,592,610	+				-0.7
4,592,610	+				-0.1
4,592,611	-				-1.2
4,592,611	-				+0.6
4,592,625	+				-0.2
4,592,625	+				+1.1
4,592,625	+				-2.4
4,592,625	+				-1.4
4,592,625	+				+1.1
4,592,625	+				+0.8
4,592,625	+				-1.9
4,592,625	+				-1.4
4,592,625	+				+1.7
4,592,626	-				-0.2
4,592,626	-				-0.7
4,592,626	-				-0.5
4,592,626	-				-1.7
4,592,626	-				-2.1
4,592,626	-				+0.1
4,592,636	+				-0.6
4,592,636	+				+0.9
4,592,636	+				+0.4
4,592,636	+				-0.9
4,592,637	-				+0.9
4,592,725	+		PFLU_RS20330	0.44	+0.3
4,592,725	+		PFLU_RS20330	0.44	+0.1
4,592,725	+		PFLU_RS20330	0.44	+0.1
4,592,725	+		PFLU_RS20330	0.44	-2.9
4,592,726	-		PFLU_RS20330	0.45	+3.1
4,592,726	-		PFLU_RS20330	0.45	-1.7
4,592,726	-		PFLU_RS20330	0.45	-0.7
4,592,726	-		PFLU_RS20330	0.45	+1.5
4,592,813	+		PFLU_RS20330	0.85	+0.1
4,592,813	+		PFLU_RS20330	0.85	-0.2
4,592,813	+		PFLU_RS20330	0.85	+0.8
4,592,841	+				+0.5
4,592,841	+				-0.5
4,592,841	+				-1.5
4,592,842	-				-0.9
4,592,842	-				-1.5
4,592,842	-				+0.1
4,592,842	-				-0.7
4,592,857	+				-0.5
4,592,858	-				-0.8
4,592,919	-				+0.5
4,592,985	-		PFLU_RS20335	0.21	+0.5
4,593,006	+		PFLU_RS20335	0.28	+0.3
4,593,120	+		PFLU_RS20335	0.63	+0.5
4,593,120	+		PFLU_RS20335	0.63	+1.7
4,593,211	-				-0.8
4,593,211	-				-0.3
4,593,247	+				-0.5
4,593,247	+				+0.6
4,593,247	+				+0.9
4,593,247	+				-1.2
4,593,247	+				+2.7
4,593,247	+				+0.7
4,593,247	+				+1.7
4,593,247	+				-1.1
4,593,248	-				-0.4
4,593,248	-				+0.5
4,593,248	-				+0.8
4,593,252	+				+0.1
4,593,253	-				+1.0
4,593,307	-				+0.4
4,593,307	-				-0.5
4,593,372	-				-0.3
4,593,372	-				-0.2
4,593,386	+				+0.6
4,593,386	+				-1.5
4,593,386	+				+2.1
4,593,386	+				+0.4
4,593,386	+				+1.1
4,593,387	-				-0.3
4,593,387	-				+1.2
4,593,398	+				-0.3
4,593,398	+				+1.6
4,593,398	+				-1.2
4,593,398	+				-0.4
4,593,398	+				+0.2
4,593,399	-				+0.8
4,593,399	-				+1.7
4,593,399	-				+1.0
4,593,399	-				-0.3
4,593,399	-				-0.9
4,593,399	-				+1.7
4,593,399	-				+0.3
4,593,475	+		PFLU_RS20340	0.30	-1.1
4,593,476	-		PFLU_RS20340	0.30	-1.2
4,593,485	-		PFLU_RS20340	0.33	-0.4
4,593,485	-		PFLU_RS20340	0.33	+0.5
4,593,485	-		PFLU_RS20340	0.33	+0.1
4,593,485	-		PFLU_RS20340	0.33	-1.2
4,593,488	+		PFLU_RS20340	0.34	+0.5
4,593,488	+		PFLU_RS20340	0.34	+1.7
4,593,488	+		PFLU_RS20340	0.34	+1.5
4,593,488	+		PFLU_RS20340	0.34	-1.5
4,593,488	+		PFLU_RS20340	0.34	+1.5
4,593,489	-		PFLU_RS20340	0.35	+0.4
4,593,489	-		PFLU_RS20340	0.35	-0.0
4,593,570	+		PFLU_RS20340	0.61	-1.7
4,593,570	+		PFLU_RS20340	0.61	-0.3
4,593,570	+		PFLU_RS20340	0.61	+0.1
4,593,570	+		PFLU_RS20340	0.61	-0.6
4,593,570	+		PFLU_RS20340	0.61	+0.0
4,593,570	+		PFLU_RS20340	0.61	+0.8
4,593,570	+		PFLU_RS20340	0.61	-0.9
4,593,570	+		PFLU_RS20340	0.61	-0.1
4,593,570	+		PFLU_RS20340	0.61	-0.2
4,593,570	+		PFLU_RS20340	0.61	+0.6
4,593,571	-		PFLU_RS20340	0.61	-0.2
4,593,571	-		PFLU_RS20340	0.61	+0.6
4,593,571	-		PFLU_RS20340	0.61	-0.3
4,593,571	-		PFLU_RS20340	0.61	+0.5
4,593,571	-		PFLU_RS20340	0.61	-0.7
4,593,571	-		PFLU_RS20340	0.61	-1.6
4,593,571	-		PFLU_RS20340	0.61	+0.1
4,593,571	-		PFLU_RS20340	0.61	+0.8
4,593,571	-		PFLU_RS20340	0.61	+0.4
4,593,571	-		PFLU_RS20340	0.61	+1.1
4,593,572	+		PFLU_RS20340	0.61	+1.4
4,593,572	+		PFLU_RS20340	0.61	+1.1
4,593,572	+		PFLU_RS20340	0.61	-0.1
4,593,572	+		PFLU_RS20340	0.61	+0.6
4,593,572	+		PFLU_RS20340	0.61	-0.2
4,593,572	+		PFLU_RS20340	0.61	-0.6
4,593,572	+		PFLU_RS20340	0.61	+0.2
4,593,572	+		PFLU_RS20340	0.61	+1.1
4,593,572	+		PFLU_RS20340	0.61	-0.0
4,593,572	+		PFLU_RS20340	0.61	+0.7
4,593,572	+		PFLU_RS20340	0.61	+0.6
4,593,573	-		PFLU_RS20340	0.62	-0.2
4,593,573	-		PFLU_RS20340	0.62	-0.5
4,593,573	-		PFLU_RS20340	0.62	+0.2
4,593,573	-		PFLU_RS20340	0.62	-0.7
4,593,573	-		PFLU_RS20340	0.62	+0.6
4,593,573	-		PFLU_RS20340	0.62	+0.1
4,593,573	-		PFLU_RS20340	0.62	-0.6
4,593,573	-		PFLU_RS20340	0.62	-1.4
4,593,621	+		PFLU_RS20340	0.77	+0.9
4,593,622	-		PFLU_RS20340	0.78	-0.7
4,593,622	-		PFLU_RS20340	0.78	+0.6
4,593,622	-		PFLU_RS20340	0.78	+1.8
4,593,709	+				-1.0
4,593,709	+				+0.3
4,593,709	+				-1.6
4,593,709	+				-0.3
4,593,710	-				-0.1
4,593,710	-				-0.3
4,593,710	-				+0.4
4,593,764	+				-0.2
4,593,764	+				-0.5
4,593,764	+				-0.6
4,593,764	+				+0.7
4,593,764	+				+0.0
4,593,764	+				-0.3
4,593,764	+				-0.9
4,593,764	+				-0.2
4,593,765	-				+0.3
4,593,765	-				-0.9
4,593,765	-				+0.1
4,593,765	-				-1.1
4,593,765	-				-0.3
4,593,765	-				-0.1
4,593,765	-				-0.4
4,593,765	-				+0.1
4,593,765	-				+1.1
4,593,765	-				-0.6
4,593,765	-				+1.7
4,593,765	-				-1.0
4,593,765	-				+0.5
4,593,765	-				+0.1
4,593,765	-				-0.1
4,593,768	+				-0.3
4,593,768	+				-0.3
4,593,768	+				+0.3
4,593,768	+				-0.5
4,593,768	+				-0.7
4,593,768	+				-1.0
4,593,768	+				+0.3
4,593,768	+				+0.4
4,593,768	+				-1.5
4,593,768	+				-1.1
4,593,768	+				+0.7
4,593,768	+				-0.6
4,593,768	+				-0.2
4,593,769	-				-0.5
4,593,769	-				-1.5
4,593,769	-				-0.2
4,593,769	-				-0.6
4,593,769	-				-0.6
4,593,769	-				+1.0
4,593,769	-				+1.9
4,593,769	-				+0.2
4,593,769	-				-1.6
4,593,769	-				-0.2
4,593,781	+				-0.5
4,593,781	+				-0.2
4,593,781	+				+0.3
4,593,781	+				+1.0
4,593,782	-				+0.8
4,593,782	-				+0.8
4,593,797	+				+0.8
4,593,872	+				-0.1
4,593,922	+		PFLU_RS20345	0.28	-0.1
4,593,922	+		PFLU_RS20345	0.28	-0.0
4,593,922	+		PFLU_RS20345	0.28	-0.9
4,593,923	-		PFLU_RS20345	0.29	-0.4
4,593,923	-		PFLU_RS20345	0.29	+0.9
4,593,987	+		PFLU_RS20345	0.59	+0.2
4,593,988	-		PFLU_RS20345	0.59	+0.7
4,594,019	+		PFLU_RS20345	0.74	+2.4
4,594,030	+		PFLU_RS20345	0.79	+0.1
4,594,031	-		PFLU_RS20345	0.79	-0.9
4,594,072	+				-0.2
4,594,109	+				-0.3
4,594,109	+				+0.6
4,594,109	+				+0.3
4,594,109	+				-0.2
4,594,109	+				+0.1
4,594,109	+				-1.5
4,594,109	+				-0.4
4,594,109	+				+0.8
4,594,110	-				-1.9
4,594,110	-				-0.9
4,594,110	-				-0.1
4,594,110	-				-0.9
4,594,110	-				-0.6
4,594,110	-				+0.1
4,594,110	-				+1.0
4,594,110	-				+1.1
4,594,110	-				-0.4
4,594,110	-				+0.3
4,594,110	-				+0.4
4,594,110	-				+0.6
4,594,110	-				-0.5
4,594,110	-				+0.3
4,594,110	-				-0.1
4,594,110	-				+0.4
4,594,110	-				-0.0
4,594,208	+				-0.1
4,594,208	+				+1.2
4,594,208	+				+0.4
4,594,208	+				+0.5
4,594,209	-				-0.5
4,594,209	-				-0.5