Experiment: D-Trehalose 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS20020 and PFLU_RS20025 are separated by 37 nucleotides PFLU_RS20025 and PFLU_RS20030 are separated by 2 nucleotides PFLU_RS20030 and PFLU_RS20035 are separated by 12 nucleotides
PFLU_RS20020: PFLU_RS20020 - gamma-glutamyltransferase family protein, at 4,531,141 to 4,532,751
_RS20020
PFLU_RS20025: PFLU_RS20025 - amino acid ABC transporter ATP-binding protein, at 4,532,789 to 4,533,568
_RS20025
PFLU_RS20030: PFLU_RS20030 - amino acid ABC transporter permease, at 4,533,571 to 4,534,347
_RS20030
PFLU_RS20035: PFLU_RS20035 - ABC transporter substrate-binding protein, at 4,534,360 to 4,535,166
_RS20035
Position (kb) 4532
4533
4534 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4531.820 kb on + strand, within PFLU_RS20020 at 4531.820 kb on + strand, within PFLU_RS20020 at 4531.820 kb on + strand, within PFLU_RS20020 at 4531.820 kb on + strand, within PFLU_RS20020 at 4531.820 kb on + strand, within PFLU_RS20020 at 4531.820 kb on + strand, within PFLU_RS20020 at 4531.820 kb on + strand, within PFLU_RS20020 at 4531.820 kb on + strand, within PFLU_RS20020 at 4531.820 kb on + strand, within PFLU_RS20020 at 4531.821 kb on - strand, within PFLU_RS20020 at 4531.821 kb on - strand, within PFLU_RS20020 at 4531.821 kb on - strand, within PFLU_RS20020 at 4531.821 kb on - strand, within PFLU_RS20020 at 4531.821 kb on - strand, within PFLU_RS20020 at 4531.821 kb on - strand, within PFLU_RS20020 at 4531.821 kb on - strand, within PFLU_RS20020 at 4531.821 kb on - strand, within PFLU_RS20020 at 4531.821 kb on - strand, within PFLU_RS20020 at 4531.821 kb on - strand, within PFLU_RS20020 at 4531.821 kb on - strand, within PFLU_RS20020 at 4531.821 kb on - strand, within PFLU_RS20020 at 4531.838 kb on + strand, within PFLU_RS20020 at 4531.838 kb on + strand, within PFLU_RS20020 at 4531.985 kb on + strand, within PFLU_RS20020 at 4531.986 kb on - strand, within PFLU_RS20020 at 4532.049 kb on - strand, within PFLU_RS20020 at 4532.049 kb on - strand, within PFLU_RS20020 at 4532.102 kb on + strand, within PFLU_RS20020 at 4532.356 kb on - strand, within PFLU_RS20020 at 4532.356 kb on - strand, within PFLU_RS20020 at 4532.424 kb on - strand, within PFLU_RS20020 at 4532.698 kb on + strand at 4532.698 kb on + strand at 4532.699 kb on - strand at 4532.699 kb on - strand at 4532.699 kb on - strand at 4532.699 kb on - strand at 4532.778 kb on + strand at 4532.779 kb on - strand at 4532.792 kb on + strand at 4532.953 kb on + strand, within PFLU_RS20025 at 4532.953 kb on + strand, within PFLU_RS20025 at 4533.473 kb on + strand, within PFLU_RS20025 at 4533.473 kb on + strand, within PFLU_RS20025 at 4533.474 kb on - strand, within PFLU_RS20025 at 4533.716 kb on + strand, within PFLU_RS20030 at 4533.716 kb on + strand, within PFLU_RS20030 at 4533.716 kb on + strand, within PFLU_RS20030 at 4533.717 kb on - strand, within PFLU_RS20030 at 4533.717 kb on - strand, within PFLU_RS20030 at 4533.717 kb on - strand, within PFLU_RS20030 at 4533.734 kb on + strand, within PFLU_RS20030 at 4533.734 kb on + strand, within PFLU_RS20030 at 4533.734 kb on + strand, within PFLU_RS20030 at 4533.735 kb on - strand, within PFLU_RS20030 at 4533.735 kb on - strand, within PFLU_RS20030 at 4533.735 kb on - strand, within PFLU_RS20030 at 4533.944 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.995 kb on + strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4533.996 kb on - strand, within PFLU_RS20030 at 4534.038 kb on + strand, within PFLU_RS20030 at 4534.039 kb on - strand, within PFLU_RS20030 at 4534.113 kb on - strand, within PFLU_RS20030 at 4534.159 kb on + strand, within PFLU_RS20030 at 4534.159 kb on + strand, within PFLU_RS20030 at 4534.159 kb on + strand, within PFLU_RS20030 at 4534.159 kb on + strand, within PFLU_RS20030 at 4534.159 kb on + strand, within PFLU_RS20030 at 4534.159 kb on + strand, within PFLU_RS20030 at 4534.159 kb on + strand, within PFLU_RS20030 at 4534.159 kb on + strand, within PFLU_RS20030 at 4534.160 kb on - strand, within PFLU_RS20030 at 4534.160 kb on - strand, within PFLU_RS20030 at 4534.160 kb on - strand, within PFLU_RS20030 at 4534.160 kb on - strand, within PFLU_RS20030 at 4534.160 kb on - strand, within PFLU_RS20030 at 4534.160 kb on - strand, within PFLU_RS20030 at 4534.160 kb on - strand, within PFLU_RS20030 at 4534.160 kb on - strand, within PFLU_RS20030 at 4534.160 kb on - strand, within PFLU_RS20030 at 4534.163 kb on + strand, within PFLU_RS20030 at 4534.164 kb on - strand, within PFLU_RS20030 at 4534.293 kb on - strand at 4534.316 kb on + strand at 4534.316 kb on + strand at 4534.316 kb on + strand at 4534.317 kb on - strand at 4534.317 kb on - strand at 4534.353 kb on + strand at 4534.353 kb on + strand at 4534.353 kb on + strand at 4534.353 kb on + strand at 4534.354 kb on - strand at 4534.354 kb on - strand at 4534.354 kb on - strand at 4534.409 kb on + strand at 4534.409 kb on + strand at 4534.409 kb on + strand at 4534.409 kb on + strand at 4534.409 kb on + strand at 4534.409 kb on + strand at 4534.410 kb on - strand at 4534.410 kb on - strand at 4534.410 kb on - strand at 4534.410 kb on - strand at 4534.410 kb on - strand at 4534.410 kb on - strand at 4534.410 kb on - strand at 4534.410 kb on - strand at 4534.410 kb on - strand at 4534.410 kb on - strand at 4534.410 kb on - strand at 4534.410 kb on - strand at 4534.410 kb on - strand at 4534.480 kb on + strand, within PFLU_RS20035 at 4534.480 kb on + strand, within PFLU_RS20035 at 4534.480 kb on + strand, within PFLU_RS20035 at 4534.481 kb on - strand, within PFLU_RS20035 at 4534.481 kb on - strand, within PFLU_RS20035 at 4534.553 kb on + strand, within PFLU_RS20035
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose 5 mM (C) remove 4,531,820 + PFLU_RS20020 0.42 +0.8 4,531,820 + PFLU_RS20020 0.42 -0.8 4,531,820 + PFLU_RS20020 0.42 +0.5 4,531,820 + PFLU_RS20020 0.42 -0.7 4,531,820 + PFLU_RS20020 0.42 +0.1 4,531,820 + PFLU_RS20020 0.42 +0.7 4,531,820 + PFLU_RS20020 0.42 -0.7 4,531,820 + PFLU_RS20020 0.42 -1.4 4,531,820 + PFLU_RS20020 0.42 +0.3 4,531,821 - PFLU_RS20020 0.42 +1.7 4,531,821 - PFLU_RS20020 0.42 +0.1 4,531,821 - PFLU_RS20020 0.42 +1.1 4,531,821 - PFLU_RS20020 0.42 -1.2 4,531,821 - PFLU_RS20020 0.42 -1.9 4,531,821 - PFLU_RS20020 0.42 +0.3 4,531,821 - PFLU_RS20020 0.42 +0.1 4,531,821 - PFLU_RS20020 0.42 -1.9 4,531,821 - PFLU_RS20020 0.42 +0.8 4,531,821 - PFLU_RS20020 0.42 -0.5 4,531,821 - PFLU_RS20020 0.42 +0.4 4,531,821 - PFLU_RS20020 0.42 +0.3 4,531,838 + PFLU_RS20020 0.43 +0.7 4,531,838 + PFLU_RS20020 0.43 -1.7 4,531,985 + PFLU_RS20020 0.52 +1.7 4,531,986 - PFLU_RS20020 0.52 +0.5 4,532,049 - PFLU_RS20020 0.56 -0.3 4,532,049 - PFLU_RS20020 0.56 +2.1 4,532,102 + PFLU_RS20020 0.60 -0.1 4,532,356 - PFLU_RS20020 0.75 +0.4 4,532,356 - PFLU_RS20020 0.75 -0.0 4,532,424 - PFLU_RS20020 0.80 +1.2 4,532,698 + -0.8 4,532,698 + +0.6 4,532,699 - -0.9 4,532,699 - +0.2 4,532,699 - +0.8 4,532,699 - +0.4 4,532,778 + +0.7 4,532,779 - +0.4 4,532,792 + +0.9 4,532,953 + PFLU_RS20025 0.21 +1.1 4,532,953 + PFLU_RS20025 0.21 +0.1 4,533,473 + PFLU_RS20025 0.88 +0.4 4,533,473 + PFLU_RS20025 0.88 +0.6 4,533,474 - PFLU_RS20025 0.88 -0.9 4,533,716 + PFLU_RS20030 0.19 -0.1 4,533,716 + PFLU_RS20030 0.19 +0.7 4,533,716 + PFLU_RS20030 0.19 -0.5 4,533,717 - PFLU_RS20030 0.19 +1.1 4,533,717 - PFLU_RS20030 0.19 +0.9 4,533,717 - PFLU_RS20030 0.19 -1.7 4,533,734 + PFLU_RS20030 0.21 +0.8 4,533,734 + PFLU_RS20030 0.21 +0.3 4,533,734 + PFLU_RS20030 0.21 -0.1 4,533,735 - PFLU_RS20030 0.21 -0.9 4,533,735 - PFLU_RS20030 0.21 -0.5 4,533,735 - PFLU_RS20030 0.21 +0.7 4,533,944 + PFLU_RS20030 0.48 -0.1 4,533,995 + PFLU_RS20030 0.55 -2.5 4,533,995 + PFLU_RS20030 0.55 +0.6 4,533,995 + PFLU_RS20030 0.55 +0.5 4,533,995 + PFLU_RS20030 0.55 +0.2 4,533,995 + PFLU_RS20030 0.55 +0.4 4,533,995 + PFLU_RS20030 0.55 -0.5 4,533,995 + PFLU_RS20030 0.55 +1.0 4,533,995 + PFLU_RS20030 0.55 +2.4 4,533,995 + PFLU_RS20030 0.55 -0.4 4,533,995 + PFLU_RS20030 0.55 -0.4 4,533,995 + PFLU_RS20030 0.55 +0.2 4,533,995 + PFLU_RS20030 0.55 -0.9 4,533,995 + PFLU_RS20030 0.55 -0.8 4,533,995 + PFLU_RS20030 0.55 +1.1 4,533,995 + PFLU_RS20030 0.55 -1.2 4,533,995 + PFLU_RS20030 0.55 -0.1 4,533,996 - PFLU_RS20030 0.55 -0.0 4,533,996 - PFLU_RS20030 0.55 -0.4 4,533,996 - PFLU_RS20030 0.55 +0.7 4,533,996 - PFLU_RS20030 0.55 -0.3 4,533,996 - PFLU_RS20030 0.55 +0.0 4,533,996 - PFLU_RS20030 0.55 +1.3 4,533,996 - PFLU_RS20030 0.55 -0.3 4,533,996 - PFLU_RS20030 0.55 +1.8 4,533,996 - PFLU_RS20030 0.55 -1.0 4,533,996 - PFLU_RS20030 0.55 +0.9 4,533,996 - PFLU_RS20030 0.55 +1.1 4,533,996 - PFLU_RS20030 0.55 -1.3 4,533,996 - PFLU_RS20030 0.55 -0.1 4,533,996 - PFLU_RS20030 0.55 -0.6 4,533,996 - PFLU_RS20030 0.55 +1.2 4,533,996 - PFLU_RS20030 0.55 +1.4 4,533,996 - PFLU_RS20030 0.55 -0.8 4,533,996 - PFLU_RS20030 0.55 -1.7 4,534,038 + PFLU_RS20030 0.60 +0.6 4,534,039 - PFLU_RS20030 0.60 +0.2 4,534,113 - PFLU_RS20030 0.70 -2.3 4,534,159 + PFLU_RS20030 0.76 +0.3 4,534,159 + PFLU_RS20030 0.76 +0.3 4,534,159 + PFLU_RS20030 0.76 +1.3 4,534,159 + PFLU_RS20030 0.76 +0.6 4,534,159 + PFLU_RS20030 0.76 +0.2 4,534,159 + PFLU_RS20030 0.76 +0.3 4,534,159 + PFLU_RS20030 0.76 +1.8 4,534,159 + PFLU_RS20030 0.76 -0.5 4,534,160 - PFLU_RS20030 0.76 +0.3 4,534,160 - PFLU_RS20030 0.76 +0.2 4,534,160 - PFLU_RS20030 0.76 +1.1 4,534,160 - PFLU_RS20030 0.76 -0.2 4,534,160 - PFLU_RS20030 0.76 +0.6 4,534,160 - PFLU_RS20030 0.76 +1.4 4,534,160 - PFLU_RS20030 0.76 -1.1 4,534,160 - PFLU_RS20030 0.76 +1.1 4,534,160 - PFLU_RS20030 0.76 -0.6 4,534,163 + PFLU_RS20030 0.76 +1.8 4,534,164 - PFLU_RS20030 0.76 -0.1 4,534,293 - +0.4 4,534,316 + -0.3 4,534,316 + -1.9 4,534,316 + +0.3 4,534,317 - -1.2 4,534,317 - -0.2 4,534,353 + +1.7 4,534,353 + -0.3 4,534,353 + +0.3 4,534,353 + -0.8 4,534,354 - +0.3 4,534,354 - -0.7 4,534,354 - -0.3 4,534,409 + -0.5 4,534,409 + +0.4 4,534,409 + +0.9 4,534,409 + -0.3 4,534,409 + -1.7 4,534,409 + +0.5 4,534,410 - -0.4 4,534,410 - -0.6 4,534,410 - -1.1 4,534,410 - +1.1 4,534,410 - +0.2 4,534,410 - +0.8 4,534,410 - -0.9 4,534,410 - +1.1 4,534,410 - +0.7 4,534,410 - -0.5 4,534,410 - -0.5 4,534,410 - -0.7 4,534,410 - -0.5 4,534,480 + PFLU_RS20035 0.15 +0.8 4,534,480 + PFLU_RS20035 0.15 -0.5 4,534,480 + PFLU_RS20035 0.15 +0.8 4,534,481 - PFLU_RS20035 0.15 -1.3 4,534,481 - PFLU_RS20035 0.15 +0.9 4,534,553 + PFLU_RS20035 0.24 -0.0
Or see this region's nucleotide sequence