Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19930

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
4,507,900	+		PFLU_RS19915	0.79	+0.2
4,507,903	-		PFLU_RS19915	0.79	+2.1
4,508,008	+				+0.3
4,508,008	+				+0.5
4,508,680	-		PFLU_RS19925	0.68	+0.9
4,508,796	-				+0.1
4,508,857	+				-2.4
4,508,857	+				-0.1
4,508,891	-		PFLU_RS19930	0.15	+0.9
4,508,891	-		PFLU_RS19930	0.15	-0.7
4,509,064	+		PFLU_RS19930	0.55	-0.0
4,509,064	+		PFLU_RS19930	0.55	+0.8
4,509,065	-		PFLU_RS19930	0.55	+0.7
4,509,065	-		PFLU_RS19930	0.55	+0.1
4,509,115	+		PFLU_RS19930	0.67	+1.0
4,509,115	+		PFLU_RS19930	0.67	+0.2
4,509,116	-		PFLU_RS19930	0.67	+1.1
4,509,116	-		PFLU_RS19930	0.67	-0.5
4,509,116	-		PFLU_RS19930	0.67	-0.4
4,509,116	-		PFLU_RS19930	0.67	+1.8
4,509,151	-		PFLU_RS19930	0.76	+0.2
4,509,209	+		PFLU_RS19930	0.89	-0.7
4,509,210	-		PFLU_RS19930	0.89	-0.2
4,509,210	-		PFLU_RS19930	0.89	+0.5
4,509,246	-				+0.4
4,509,246	-				+0.5
4,509,269	-				+0.8
4,509,278	+				+0.3
4,509,278	+				-0.8
4,509,278	+				+0.0
4,509,278	+				+0.7
4,509,278	+				+0.2
4,509,278	+				+1.2
4,509,278	+				-1.8
4,509,278	+				-2.5
4,509,278	+				-0.0
4,509,278	+				+0.1
4,509,278	+				-0.5
4,509,278	+				+0.1
4,509,278	+				+0.9
4,509,278	+				+1.5
4,509,278	+				+1.3
4,509,278	+				-0.6
4,509,278	+				+0.1
4,509,278	+				+2.7
4,509,278	+				+0.4
4,509,279	-				+0.2
4,509,279	-				-1.2
4,509,279	-				+1.9
4,509,279	-				-0.1
4,509,279	-				-0.1
4,509,279	-				-0.4
4,509,279	-				+0.0
4,509,279	-				+0.6
4,509,279	-				-0.7
4,509,279	-				-0.1
4,509,279	-				-0.3
4,509,279	-				+0.6
4,509,279	-				-0.3
4,509,279	-				+0.9
4,509,279	-				-0.1
4,509,279	-				+2.0
4,509,279	-				+0.3
4,509,279	-				-1.0
4,509,279	-				+0.2
4,509,279	-				-0.1
4,509,279	-				-1.7
4,509,279	-				-0.9
4,509,279	-				+1.6
4,509,279	-				-0.2
4,509,279	-				+1.1
4,509,279	-				-0.9
4,509,279	-				+0.7
4,509,279	-				+0.4
4,509,279	-				+0.7
4,509,279	-				-0.5
4,509,279	-				+0.3
4,509,280	+				+0.5
4,509,280	+				-0.5
4,509,280	+				-0.0
4,509,280	+				-0.5
4,509,280	+				-0.4
4,509,280	+				-0.3
4,509,280	+				+0.5
4,509,280	+				+0.7
4,509,280	+				-2.1
4,509,280	+				+0.2
4,509,281	-				-0.5
4,509,281	-				-1.1
4,509,281	-				+0.7
4,509,281	-				-1.9
4,509,281	-				-0.6
4,509,281	-				+1.3
4,509,281	-				+0.3
4,509,281	-				-0.5
4,509,281	-				+1.5
4,509,281	-				-0.8
4,509,281	-				+0.8
4,509,281	-				+1.3
4,509,281	-				+0.8
4,509,281	-				-1.3
4,509,281	-				-1.1
4,509,281	-				+0.5
4,509,281	-				-0.3
4,509,281	-				-0.8
4,509,281	-				+0.1
4,509,281	-				-0.2
4,509,918	+		PFLU_RS19935	0.53	-1.1
4,509,973	-		PFLU_RS19935	0.58	+0.2
4,510,024	-		PFLU_RS19935	0.62	-1.9
4,510,092	+		PFLU_RS19935	0.68	-1.2