Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19730

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
4,463,018	+		PFLU_RS19725	0.60	+1.6
4,463,019	-		PFLU_RS19725	0.60	+1.2
4,463,059	+		PFLU_RS19725	0.63	-0.4
4,463,060	-		PFLU_RS19725	0.63	-0.2
4,463,213	+		PFLU_RS19725	0.75	-0.5
4,463,214	-		PFLU_RS19725	0.75	-1.5
4,463,214	-		PFLU_RS19725	0.75	-0.2
4,463,215	+		PFLU_RS19725	0.75	+2.1
4,463,216	-		PFLU_RS19725	0.75	-0.3
4,463,216	-		PFLU_RS19725	0.75	-0.1
4,463,216	-		PFLU_RS19725	0.75	-0.8
4,463,216	-		PFLU_RS19725	0.75	-0.9
4,463,266	+		PFLU_RS19725	0.79	-2.3
4,463,266	+		PFLU_RS19725	0.79	+0.4
4,463,266	+		PFLU_RS19725	0.79	-0.4
4,463,266	+		PFLU_RS19725	0.79	-0.3
4,463,267	-		PFLU_RS19725	0.79	-0.7
4,463,267	-		PFLU_RS19725	0.79	+0.0
4,463,276	-		PFLU_RS19725	0.80	-0.5
4,463,396	-		PFLU_RS19725	0.89	-1.0
4,463,528	+				-0.4
4,463,590	+				+0.9
4,463,590	+				+0.2
4,463,590	+				-0.5
4,463,705	-				-1.0
4,463,742	+				+0.5
4,463,743	-				+0.5
4,463,743	-				+0.6
4,463,743	-				+0.5
4,463,854	-		PFLU_RS19730	0.13	+0.3
4,464,109	+		PFLU_RS19730	0.41	+1.2
4,464,110	-		PFLU_RS19730	0.41	+0.1
4,464,249	+		PFLU_RS19730	0.56	+1.5
4,464,250	-		PFLU_RS19730	0.56	+1.0
4,464,389	+		PFLU_RS19730	0.71	+2.0
4,464,543	-		PFLU_RS19730	0.88	-1.2
4,464,593	+				-0.5
4,464,662	+				-0.5
4,464,662	+				+0.5
4,464,666	+				+1.3
4,464,667	-				+1.9
4,464,667	-				-0.7
4,464,680	+				-0.1
4,464,680	+				-1.3
4,464,680	+				-0.1
4,464,680	+				-0.7
4,464,680	+				+2.0
4,464,680	+				-0.2
4,464,680	+				-0.1
4,464,680	+				-0.2
4,464,680	+				-1.0
4,464,680	+				+0.9
4,464,680	+				+0.7
4,464,680	+				+0.8
4,464,681	-				-1.0
4,464,681	-				-2.1
4,464,681	-				-0.5
4,464,681	-				-1.5
4,464,681	-				-0.7
4,464,681	-				+0.5
4,464,681	-				-0.4
4,464,684	+				+0.3
4,464,684	+				+0.3
4,464,685	-				-0.4
4,464,685	-				+1.8
4,464,685	-				-2.8
4,464,685	-				+0.0
4,464,685	-				+1.0
4,464,710	-				-0.2
4,464,989	-				-0.7
4,464,989	-				-0.1
4,464,989	-				+0.0
4,464,989	-				-0.5
4,464,993	-				+0.5
4,464,993	-				+0.0
4,464,993	-				+0.5
4,464,993	-				-0.4
4,464,993	-				-1.8
4,465,401	+				-0.5
4,465,401	+				-0.0
4,465,401	+				+1.4
4,465,416	+				+0.7
4,465,416	+				-0.3
4,465,420	+				-0.4
4,465,420	+				+0.0
4,465,427	+				+0.0
4,465,431	+				-2.1
4,465,431	+				+0.3
4,465,431	+				+0.6
4,465,431	+				+0.0
4,465,431	+				-1.5
4,465,431	+				+0.2
4,465,431	+				+0.3
4,465,431	+				-0.1
4,465,431	+				-0.4
4,465,431	+				+0.3
4,465,431	+				+0.5
4,465,431	+				+0.0
4,465,431	+				+0.1
4,465,431	+				+1.2
4,465,431	+				+1.6
4,465,431	+				+1.8
4,465,431	+				-1.3
4,465,431	+				+0.8