Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19475

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
4,402,084	+				-0.8
4,402,084	+				+0.0
4,402,084	+				-1.0
4,402,084	+				+1.0
4,402,084	+				+1.0
4,402,085	-				+1.6
4,402,085	-				-0.3
4,402,131	+				-1.3
4,402,131	+				-0.8
4,402,132	-				-0.1
4,402,132	-				-1.0
4,402,132	-				+0.2
4,402,132	-				-0.7
4,402,132	-				+1.0
4,402,132	-				-0.3
4,402,134	+				+0.1
4,402,134	+				-2.7
4,402,135	-				+0.6
4,402,135	-				+0.8
4,402,135	-				+0.2
4,402,135	-				-0.3
4,402,209	-		PFLU_RS19470	0.15	+1.9
4,402,441	-		PFLU_RS19470	0.48	+0.3
4,402,702	-		PFLU_RS19470	0.86	-0.3
4,402,702	-		PFLU_RS19470	0.86	+0.6
4,402,702	-		PFLU_RS19470	0.86	-0.4
4,402,702	-		PFLU_RS19470	0.86	+0.2
4,402,728	+		PFLU_RS19470	0.90	-0.5
4,402,728	+		PFLU_RS19470	0.90	-1.2
4,402,728	+		PFLU_RS19470	0.90	+1.5
4,402,728	+		PFLU_RS19470	0.90	-0.9
4,402,729	-		PFLU_RS19470	0.90	+0.4
4,402,779	+				-1.3
4,402,818	+				+1.0
4,402,818	+				+0.5
4,402,818	+				+2.0
4,402,818	+				-0.3
4,402,819	-				-2.7
4,402,819	-				-0.9
4,402,819	-				+0.0
4,403,112	+		PFLU_RS19475	0.24	+1.3
4,403,395	+		PFLU_RS19475	0.46	+0.7
4,403,396	-		PFLU_RS19475	0.46	-0.9
4,403,396	-		PFLU_RS19475	0.46	+1.5
4,403,396	-		PFLU_RS19475	0.46	+0.4
4,403,396	-		PFLU_RS19475	0.46	-1.6
4,403,396	-		PFLU_RS19475	0.46	+0.9
4,403,410	-		PFLU_RS19475	0.47	-0.2
4,403,662	-		PFLU_RS19475	0.67	-0.3
4,403,886	+		PFLU_RS19475	0.85	+0.7
4,404,035	+				-0.4
4,404,177	-				-0.2
4,404,186	+				-0.6
4,404,186	+				-0.4
4,404,186	+				+0.4
4,404,187	-				-0.9
4,404,187	-				+1.2
4,404,188	+				+2.0
4,404,207	+				+0.9
4,404,414	-		PFLU_RS19480	0.24	+0.1
4,404,672	+		PFLU_RS19480	0.42	+0.5
4,404,673	-		PFLU_RS19480	0.42	-1.0
4,404,673	-		PFLU_RS19480	0.42	+2.0
4,404,673	-		PFLU_RS19480	0.42	+0.2
4,404,865	-		PFLU_RS19480	0.56	-0.6
4,404,882	+		PFLU_RS19480	0.57	+0.4
4,404,883	-		PFLU_RS19480	0.57	-0.1