Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19025

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
4,301,661	+				+0.5
4,301,662	-				-1.6
4,301,678	+				+0.1
4,301,694	+				+0.2
4,301,694	+				-1.2
4,301,694	+				-1.1
4,301,694	+				-0.6
4,301,694	+				-2.9
4,301,694	+				-0.0
4,301,694	+				+0.4
4,301,694	+				-1.0
4,301,694	+				+2.3
4,301,694	+				+1.0
4,301,694	+				-0.4
4,301,695	-				-0.9
4,301,695	-				+0.7
4,301,695	-				-0.5
4,301,695	-				+1.2
4,301,695	-				+0.4
4,301,695	-				+1.1
4,301,695	-				-0.4
4,301,699	-				+0.3
4,301,699	-				-0.5
4,301,727	+				+0.6
4,301,728	-				+0.5
4,301,728	-				-1.0
4,301,742	+				-0.3
4,301,742	+				-0.6
4,301,742	+				-0.2
4,301,742	+				-0.4
4,301,742	+				-0.3
4,301,742	+				-0.5
4,301,743	-				-0.3
4,301,743	-				+1.0
4,301,743	-				+0.4
4,301,743	-				-0.5
4,301,743	-				-1.8
4,301,839	+		PFLU_RS19020	0.19	+0.6
4,301,839	+		PFLU_RS19020	0.19	+0.8
4,301,840	-		PFLU_RS19020	0.20	-0.3
4,301,860	+		PFLU_RS19020	0.22	+1.0
4,301,861	-		PFLU_RS19020	0.22	+0.1
4,301,865	+		PFLU_RS19020	0.22	+0.1
4,301,866	-		PFLU_RS19020	0.22	+0.2
4,301,874	+		PFLU_RS19020	0.23	-0.9
4,301,874	+		PFLU_RS19020	0.23	+0.3
4,301,874	+		PFLU_RS19020	0.23	+0.0
4,301,874	+		PFLU_RS19020	0.23	-0.2
4,301,874	+		PFLU_RS19020	0.23	+0.4
4,301,874	+		PFLU_RS19020	0.23	+0.6
4,301,874	+		PFLU_RS19020	0.23	+0.6
4,301,874	+		PFLU_RS19020	0.23	+1.0
4,301,874	+		PFLU_RS19020	0.23	-1.0
4,301,874	+		PFLU_RS19020	0.23	+0.9
4,301,874	+		PFLU_RS19020	0.23	+0.6
4,301,874	+		PFLU_RS19020	0.23	+0.8
4,301,875	-		PFLU_RS19020	0.23	-1.8
4,301,875	-		PFLU_RS19020	0.23	-0.8
4,301,875	-		PFLU_RS19020	0.23	-0.6
4,301,875	-		PFLU_RS19020	0.23	+1.0
4,301,875	-		PFLU_RS19020	0.23	-0.2
4,302,124	+		PFLU_RS19020	0.51	+0.4
4,302,124	+		PFLU_RS19020	0.51	-0.6
4,302,124	+		PFLU_RS19020	0.51	-1.1
4,302,124	+		PFLU_RS19020	0.51	-1.6
4,302,124	+		PFLU_RS19020	0.51	+0.6
4,302,124	+		PFLU_RS19020	0.51	+0.0
4,302,125	-		PFLU_RS19020	0.51	+1.0
4,302,125	-		PFLU_RS19020	0.51	-0.8
4,302,125	-		PFLU_RS19020	0.51	-0.5
4,302,125	-		PFLU_RS19020	0.51	-1.4
4,302,150	+		PFLU_RS19020	0.53	+0.1
4,302,150	+		PFLU_RS19020	0.53	-0.5
4,302,150	+		PFLU_RS19020	0.53	+0.3
4,302,150	+		PFLU_RS19020	0.53	+0.2
4,302,150	+		PFLU_RS19020	0.53	+0.1
4,302,150	+		PFLU_RS19020	0.53	-0.0
4,302,151	-		PFLU_RS19020	0.53	+1.4
4,302,151	-		PFLU_RS19020	0.53	+0.1
4,302,151	-		PFLU_RS19020	0.53	-0.2
4,302,151	-		PFLU_RS19020	0.53	-1.2
4,302,151	-		PFLU_RS19020	0.53	+0.4
4,302,151	-		PFLU_RS19020	0.53	-0.4
4,302,151	-		PFLU_RS19020	0.53	+0.6
4,302,151	-		PFLU_RS19020	0.53	-0.0
4,302,186	+		PFLU_RS19020	0.57	+0.1
4,302,186	+		PFLU_RS19020	0.57	+0.6
4,302,187	-		PFLU_RS19020	0.57	-0.9
4,302,187	-		PFLU_RS19020	0.57	+0.5
4,302,187	-		PFLU_RS19020	0.57	-0.6
4,302,187	-		PFLU_RS19020	0.57	-0.5
4,302,187	-		PFLU_RS19020	0.57	-0.4
4,302,205	+		PFLU_RS19020	0.59	-0.1
4,302,228	+		PFLU_RS19020	0.62	+0.3
4,302,229	-		PFLU_RS19020	0.62	-1.0
4,302,358	+		PFLU_RS19020	0.76	-1.0
4,302,358	+		PFLU_RS19020	0.76	+0.3
4,302,358	+		PFLU_RS19020	0.76	+0.4
4,302,359	-		PFLU_RS19020	0.76	+0.3
4,302,359	-		PFLU_RS19020	0.76	-0.8
4,302,361	-		PFLU_RS19020	0.76	+0.8
4,302,421	-		PFLU_RS19020	0.83	+2.1
4,302,421	-		PFLU_RS19020	0.83	-0.2
4,302,596	+				+0.1
4,302,596	+				-0.5
4,302,597	-				-0.9
4,302,597	-				-1.0
4,302,597	-				-1.6
4,302,597	-				+0.5
4,302,637	+				+1.1
4,302,638	-				+1.0
4,302,638	-				-0.6
4,302,638	-				+0.5
4,302,638	-				-1.0
4,302,702	+				-0.1
4,302,703	-				-0.4
4,302,703	-				-0.2
4,302,736	-				-0.6
4,302,736	-				-1.7
4,302,736	-				+1.2
4,302,758	+				+0.4
4,302,758	+				+0.2
4,302,758	+				+0.1
4,302,758	+				-0.5
4,302,759	-				+0.8
4,302,759	-				-1.1
4,302,902	+		PFLU_RS19025	0.12	+1.5
4,302,903	-		PFLU_RS19025	0.12	+0.1
4,302,986	+		PFLU_RS19025	0.15	-0.7
4,303,001	+		PFLU_RS19025	0.16	-0.0
4,303,001	+		PFLU_RS19025	0.16	-0.6
4,303,001	+		PFLU_RS19025	0.16	+0.5
4,303,001	+		PFLU_RS19025	0.16	+0.7
4,303,001	+		PFLU_RS19025	0.16	-0.4
4,303,001	+		PFLU_RS19025	0.16	+0.6
4,303,002	-		PFLU_RS19025	0.16	+0.8
4,303,002	-		PFLU_RS19025	0.16	-0.3
4,303,067	+		PFLU_RS19025	0.19	-1.6
4,303,099	-		PFLU_RS19025	0.20	+0.5
4,303,211	+		PFLU_RS19025	0.25	-0.0
4,303,212	-		PFLU_RS19025	0.25	-1.8
4,303,212	-		PFLU_RS19025	0.25	-0.1
4,303,212	-		PFLU_RS19025	0.25	-0.8
4,303,213	+		PFLU_RS19025	0.25	-1.2
4,303,214	-		PFLU_RS19025	0.25	+2.3
4,303,214	-		PFLU_RS19025	0.25	+2.0
4,303,304	+		PFLU_RS19025	0.29	-1.4
4,303,304	+		PFLU_RS19025	0.29	+0.5
4,303,304	+		PFLU_RS19025	0.29	+0.2
4,303,304	+		PFLU_RS19025	0.29	-1.8
4,303,304	+		PFLU_RS19025	0.29	+0.6
4,303,305	-		PFLU_RS19025	0.29	+0.1
4,303,305	-		PFLU_RS19025	0.29	-1.4
4,303,305	-		PFLU_RS19025	0.29	+0.0
4,303,305	-		PFLU_RS19025	0.29	-0.7
4,303,340	+		PFLU_RS19025	0.30	-0.4
4,303,340	+		PFLU_RS19025	0.30	-0.2
4,303,340	+		PFLU_RS19025	0.30	+1.5
4,303,340	+		PFLU_RS19025	0.30	+0.7
4,303,340	+		PFLU_RS19025	0.30	+0.1
4,303,340	+		PFLU_RS19025	0.30	+1.0
4,303,340	+		PFLU_RS19025	0.30	-0.1
4,303,341	-		PFLU_RS19025	0.30	+1.2
4,303,341	-		PFLU_RS19025	0.30	-0.5
4,303,341	-		PFLU_RS19025	0.30	-0.0
4,303,341	-		PFLU_RS19025	0.30	-0.2
4,303,341	-		PFLU_RS19025	0.30	-2.7
4,303,341	-		PFLU_RS19025	0.30	-0.1
4,303,341	-		PFLU_RS19025	0.30	-0.7
4,303,478	+		PFLU_RS19025	0.36	+0.3
4,303,478	+		PFLU_RS19025	0.36	-1.8
4,303,478	+		PFLU_RS19025	0.36	-1.4
4,303,565	+		PFLU_RS19025	0.40	+0.3
4,303,566	-		PFLU_RS19025	0.40	+1.0
4,303,643	+		PFLU_RS19025	0.43	-0.7
4,303,644	-		PFLU_RS19025	0.43	+0.4
4,303,644	-		PFLU_RS19025	0.43	-0.0
4,303,673	+		PFLU_RS19025	0.44	-0.2
4,303,701	-		PFLU_RS19025	0.46	+0.2
4,303,701	-		PFLU_RS19025	0.46	+0.2
4,303,713	-		PFLU_RS19025	0.46	-0.2
4,303,727	+		PFLU_RS19025	0.47	-1.0
4,303,727	+		PFLU_RS19025	0.47	+0.7
4,303,727	+		PFLU_RS19025	0.47	+1.3
4,303,727	+		PFLU_RS19025	0.47	-1.5
4,303,727	+		PFLU_RS19025	0.47	+0.2
4,303,727	+		PFLU_RS19025	0.47	-0.4
4,303,727	+		PFLU_RS19025	0.47	-1.4
4,303,727	+		PFLU_RS19025	0.47	+1.7
4,303,727	+		PFLU_RS19025	0.47	+1.3
4,303,728	-		PFLU_RS19025	0.47	-0.9
4,303,728	-		PFLU_RS19025	0.47	+1.1
4,303,728	-		PFLU_RS19025	0.47	-0.5
4,303,728	-		PFLU_RS19025	0.47	+1.6
4,303,728	-		PFLU_RS19025	0.47	-0.1
4,303,728	-		PFLU_RS19025	0.47	+1.5
4,303,728	-		PFLU_RS19025	0.47	+1.2
4,303,728	-		PFLU_RS19025	0.47	-1.2
4,303,895	+		PFLU_RS19025	0.54	+1.0
4,303,895	+		PFLU_RS19025	0.54	-1.3
4,303,896	-		PFLU_RS19025	0.54	-0.3
4,303,896	-		PFLU_RS19025	0.54	-1.0
4,304,027	+		PFLU_RS19025	0.59	-1.0
4,304,027	+		PFLU_RS19025	0.59	+2.0
4,304,027	+		PFLU_RS19025	0.59	+0.1
4,304,027	+		PFLU_RS19025	0.59	+0.5
4,304,027	+		PFLU_RS19025	0.59	-0.8
4,304,027	+		PFLU_RS19025	0.59	-0.5
4,304,027	+		PFLU_RS19025	0.59	-0.4
4,304,027	+		PFLU_RS19025	0.59	-0.4
4,304,027	+		PFLU_RS19025	0.59	-0.3
4,304,027	+		PFLU_RS19025	0.59	-1.0
4,304,027	+		PFLU_RS19025	0.59	+0.7
4,304,027	+		PFLU_RS19025	0.59	-0.0
4,304,027	+		PFLU_RS19025	0.59	+1.3
4,304,027	+		PFLU_RS19025	0.59	+0.5
4,304,027	+		PFLU_RS19025	0.59	+0.2
4,304,027	+		PFLU_RS19025	0.59	+1.2
4,304,027	+		PFLU_RS19025	0.59	+0.1
4,304,027	+		PFLU_RS19025	0.59	+0.3
4,304,027	+		PFLU_RS19025	0.59	+0.6
4,304,027	+		PFLU_RS19025	0.59	-0.3
4,304,027	+		PFLU_RS19025	0.59	+2.0
4,304,027	+		PFLU_RS19025	0.59	-0.3
4,304,028	-		PFLU_RS19025	0.59	-0.3
4,304,028	-		PFLU_RS19025	0.59	-1.0
4,304,028	-		PFLU_RS19025	0.59	-0.6
4,304,028	-		PFLU_RS19025	0.59	+1.6
4,304,103	+		PFLU_RS19025	0.63	+0.2
4,304,104	-		PFLU_RS19025	0.63	-0.4
4,304,104	-		PFLU_RS19025	0.63	+0.5
4,304,126	+		PFLU_RS19025	0.64	-0.0
4,304,126	+		PFLU_RS19025	0.64	-0.0
4,304,127	-		PFLU_RS19025	0.64	-0.5
4,304,127	-		PFLU_RS19025	0.64	+0.4
4,304,162	+		PFLU_RS19025	0.65	-0.4
4,304,162	+		PFLU_RS19025	0.65	-0.0
4,304,173	-		PFLU_RS19025	0.66	+1.2
4,304,173	-		PFLU_RS19025	0.66	+0.5
4,304,173	-		PFLU_RS19025	0.66	-0.6
4,304,228	+		PFLU_RS19025	0.68	-0.2
4,304,228	+		PFLU_RS19025	0.68	+1.4
4,304,228	+		PFLU_RS19025	0.68	-0.4
4,304,229	-		PFLU_RS19025	0.68	+0.6
4,304,336	+		PFLU_RS19025	0.72	-0.3
4,304,336	+		PFLU_RS19025	0.72	+0.3
4,304,337	-		PFLU_RS19025	0.72	+0.4
4,304,337	-		PFLU_RS19025	0.72	-1.3
4,304,337	-		PFLU_RS19025	0.72	+1.0
4,304,337	-		PFLU_RS19025	0.72	-0.6
4,304,381	+		PFLU_RS19025	0.74	+0.2
4,304,382	-		PFLU_RS19025	0.74	+0.9
4,304,406	+		PFLU_RS19025	0.75	-0.0
4,304,407	-		PFLU_RS19025	0.75	+0.4
4,304,407	-		PFLU_RS19025	0.75	-0.4
4,304,407	-		PFLU_RS19025	0.75	+1.4
4,304,507	+		PFLU_RS19025	0.80	-0.3
4,304,508	-		PFLU_RS19025	0.80	-0.5
4,304,508	-		PFLU_RS19025	0.80	+1.0
4,304,508	-		PFLU_RS19025	0.80	-2.6
4,304,537	+		PFLU_RS19025	0.81	+1.7
4,304,537	+		PFLU_RS19025	0.81	+0.2
4,304,537	+		PFLU_RS19025	0.81	-1.4
4,304,537	+		PFLU_RS19025	0.81	+0.1
4,304,537	+		PFLU_RS19025	0.81	-2.0
4,304,537	+		PFLU_RS19025	0.81	-0.0
4,304,537	+		PFLU_RS19025	0.81	-0.8
4,304,538	-		PFLU_RS19025	0.81	+0.2
4,304,538	-		PFLU_RS19025	0.81	+0.2
4,304,538	-		PFLU_RS19025	0.81	-0.6
4,304,546	+		PFLU_RS19025	0.81	-0.5
4,304,546	+		PFLU_RS19025	0.81	+1.2
4,304,546	+		PFLU_RS19025	0.81	+0.3
4,304,546	+		PFLU_RS19025	0.81	-0.5
4,304,546	+		PFLU_RS19025	0.81	-0.2
4,304,546	+		PFLU_RS19025	0.81	-1.5
4,304,546	+		PFLU_RS19025	0.81	+0.2
4,304,546	+		PFLU_RS19025	0.81	-1.4
4,304,546	+		PFLU_RS19025	0.81	-0.9
4,304,546	+		PFLU_RS19025	0.81	+0.4
4,304,546	+		PFLU_RS19025	0.81	-0.9
4,304,546	+		PFLU_RS19025	0.81	+0.7
4,304,546	+		PFLU_RS19025	0.81	+0.2
4,304,546	+		PFLU_RS19025	0.81	+0.3
4,304,546	+		PFLU_RS19025	0.81	+0.2
4,304,546	+		PFLU_RS19025	0.81	+2.4
4,304,547	-		PFLU_RS19025	0.81	+0.2
4,304,547	-		PFLU_RS19025	0.81	+0.8
4,304,547	-		PFLU_RS19025	0.81	+0.5
4,304,547	-		PFLU_RS19025	0.81	-0.6
4,304,547	-		PFLU_RS19025	0.81	+0.7
4,304,547	-		PFLU_RS19025	0.81	-0.4
4,304,547	-		PFLU_RS19025	0.81	+0.1
4,304,547	-		PFLU_RS19025	0.81	-0.1
4,304,591	+		PFLU_RS19025	0.83	-0.5
4,304,592	-		PFLU_RS19025	0.83	+1.1
4,304,592	-		PFLU_RS19025	0.83	-1.8
4,304,592	-		PFLU_RS19025	0.83	+2.0
4,304,672	+		PFLU_RS19025	0.87	+0.9
4,304,771	+				-1.1
4,304,771	+				-0.4
4,304,771	+				-0.0
4,304,771	+				+0.0
4,304,771	+				+1.5
4,304,771	+				-1.0
4,304,772	-				-0.1
4,304,772	-				-1.4
4,304,872	-				+1.0
4,304,872	-				-0.8
4,304,920	+				-0.5
4,304,920	+				+0.4
4,304,920	+				-2.9
4,304,941	+				+1.7
4,304,941	+				-0.3
4,304,941	+				-0.2
4,304,942	-				-0.2
4,304,942	-				+0.1
4,304,942	-				-0.0
4,304,942	-				-0.2
4,304,956	+				-0.4
4,304,956	+				-0.0
4,304,956	+				+2.3
4,304,956	+				-1.0
4,304,956	+				+0.4
4,304,956	+				-0.2
4,304,956	+				+0.3
4,304,956	+				+0.3
4,304,956	+				-0.1
4,304,956	+				+0.5
4,304,956	+				-0.0
4,304,956	+				-1.4
4,304,956	+				-0.4
4,304,956	+				+0.6
4,304,956	+				+0.1
4,304,956	+				+0.1
4,304,957	-				-0.3
4,304,957	-				-0.2
4,304,957	-				+0.3
4,304,957	-				+0.1
4,304,957	-				-0.3
4,304,957	-				+0.3
4,304,957	-				-0.4
4,304,957	-				-1.4
4,304,957	-				-1.8
4,304,957	-				+0.6
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4,304,957	-				-0.4
4,304,957	-				-1.4
4,304,957	-				+0.7
4,304,957	-				-1.2
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4,304,958	+				+3.0
4,304,958	+				-0.3
4,304,958	+				-0.9
4,304,958	+				-0.6
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4,304,958	+				-0.9
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4,304,958	+				-1.8
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4,304,959	-				+1.2
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4,304,959	-				-0.5
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4,304,959	-				+0.7
4,304,959	-				+2.0
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4,305,134	+				+2.0
4,305,135	-				-1.2
4,305,135	-				+0.3
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4,305,171	+		PFLU_RS19030	0.14	+0.8
4,305,171	+		PFLU_RS19030	0.14	-0.4
4,305,171	+		PFLU_RS19030	0.14	-1.8
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4,305,172	-		PFLU_RS19030	0.15	-1.4
4,305,172	-		PFLU_RS19030	0.15	-0.8
4,305,172	-		PFLU_RS19030	0.15	+0.6
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4,305,176	-		PFLU_RS19030	0.15	+0.8
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4,305,277	+		PFLU_RS19030	0.28	-0.3
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4,305,277	+		PFLU_RS19030	0.28	+0.5
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4,305,277	+		PFLU_RS19030	0.28	+0.3
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4,305,277	+		PFLU_RS19030	0.28	+1.6
4,305,278	-		PFLU_RS19030	0.28	+0.8
4,305,278	-		PFLU_RS19030	0.28	+1.0
4,305,278	-		PFLU_RS19030	0.28	-1.1
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4,305,278	-		PFLU_RS19030	0.28	+0.6
4,305,407	-		PFLU_RS19030	0.44	+0.4
4,305,550	-		PFLU_RS19030	0.62	-0.8
4,305,550	-		PFLU_RS19030	0.62	+0.6
4,305,620	-		PFLU_RS19030	0.71	-1.0
4,305,858	+				+0.7
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4,305,858	+				-0.6
4,305,858	+				-2.7
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4,305,906	-				+0.3
4,305,947	+		PFLU_RS19035	0.16	-0.0
4,305,947	+		PFLU_RS19035	0.16	-2.3
4,305,947	+		PFLU_RS19035	0.16	+0.1
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4,305,980	+		PFLU_RS19035	0.22	-0.4
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4,305,980	+		PFLU_RS19035	0.22	+1.0
4,305,980	+		PFLU_RS19035	0.22	-0.7
4,305,981	-		PFLU_RS19035	0.22	-1.0
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4,305,981	-		PFLU_RS19035	0.22	+0.2