Experiment: D-Trehalose 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS18050 and PFLU_RS18055 are separated by 181 nucleotides PFLU_RS18055 and PFLU_RS18060 are separated by 28 nucleotides
PFLU_RS18050: PFLU_RS18050 - LysR family transcriptional regulator, at 4,096,401 to 4,097,282
_RS18050
PFLU_RS18055: PFLU_RS18055 - hydrolase, at 4,097,464 to 4,098,081
_RS18055
PFLU_RS18060: PFLU_RS18060 - amidohydrolase, at 4,098,110 to 4,099,948
_RS18060
Position (kb) 4097
4098
4099 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4096.580 kb on - strand, within PFLU_RS18050 at 4096.580 kb on - strand, within PFLU_RS18050 at 4096.632 kb on + strand, within PFLU_RS18050 at 4096.633 kb on - strand, within PFLU_RS18050 at 4096.755 kb on - strand, within PFLU_RS18050 at 4096.772 kb on - strand, within PFLU_RS18050 at 4097.086 kb on + strand, within PFLU_RS18050 at 4097.086 kb on + strand, within PFLU_RS18050 at 4097.087 kb on - strand, within PFLU_RS18050 at 4097.087 kb on - strand, within PFLU_RS18050 at 4097.089 kb on + strand, within PFLU_RS18050 at 4097.089 kb on + strand, within PFLU_RS18050 at 4097.090 kb on - strand, within PFLU_RS18050 at 4097.145 kb on + strand, within PFLU_RS18050 at 4097.146 kb on - strand, within PFLU_RS18050 at 4097.486 kb on + strand at 4097.486 kb on + strand at 4097.487 kb on - strand at 4097.487 kb on - strand at 4097.690 kb on - strand, within PFLU_RS18055 at 4097.846 kb on + strand, within PFLU_RS18055 at 4097.846 kb on + strand, within PFLU_RS18055 at 4098.044 kb on - strand at 4098.074 kb on + strand at 4098.074 kb on + strand at 4098.075 kb on - strand at 4098.087 kb on + strand at 4098.354 kb on + strand, within PFLU_RS18060 at 4098.603 kb on + strand, within PFLU_RS18060 at 4098.604 kb on - strand, within PFLU_RS18060 at 4098.624 kb on + strand, within PFLU_RS18060 at 4098.624 kb on + strand, within PFLU_RS18060 at 4098.624 kb on + strand, within PFLU_RS18060 at 4098.624 kb on + strand, within PFLU_RS18060 at 4098.624 kb on + strand, within PFLU_RS18060 at 4098.624 kb on + strand, within PFLU_RS18060 at 4098.625 kb on - strand, within PFLU_RS18060 at 4098.738 kb on + strand, within PFLU_RS18060 at 4098.739 kb on - strand, within PFLU_RS18060 at 4098.739 kb on - strand, within PFLU_RS18060 at 4098.794 kb on + strand, within PFLU_RS18060 at 4098.795 kb on - strand, within PFLU_RS18060 at 4098.918 kb on + strand, within PFLU_RS18060 at 4098.919 kb on - strand, within PFLU_RS18060 at 4098.919 kb on - strand, within PFLU_RS18060 at 4098.991 kb on + strand, within PFLU_RS18060 at 4098.992 kb on - strand, within PFLU_RS18060
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose 5 mM (C) remove 4,096,580 - PFLU_RS18050 0.20 +1.2 4,096,580 - PFLU_RS18050 0.20 +0.5 4,096,632 + PFLU_RS18050 0.26 -0.8 4,096,633 - PFLU_RS18050 0.26 +1.6 4,096,755 - PFLU_RS18050 0.40 -1.0 4,096,772 - PFLU_RS18050 0.42 -0.1 4,097,086 + PFLU_RS18050 0.78 -0.2 4,097,086 + PFLU_RS18050 0.78 +0.3 4,097,087 - PFLU_RS18050 0.78 -0.8 4,097,087 - PFLU_RS18050 0.78 +0.9 4,097,089 + PFLU_RS18050 0.78 +0.3 4,097,089 + PFLU_RS18050 0.78 -0.4 4,097,090 - PFLU_RS18050 0.78 +0.0 4,097,145 + PFLU_RS18050 0.84 -1.7 4,097,146 - PFLU_RS18050 0.84 +0.8 4,097,486 + -0.1 4,097,486 + -0.3 4,097,487 - +0.7 4,097,487 - -2.0 4,097,690 - PFLU_RS18055 0.37 +0.4 4,097,846 + PFLU_RS18055 0.62 +0.3 4,097,846 + PFLU_RS18055 0.62 +1.6 4,098,044 - -0.1 4,098,074 + +0.5 4,098,074 + -0.7 4,098,075 - +0.3 4,098,087 + +0.5 4,098,354 + PFLU_RS18060 0.13 -0.9 4,098,603 + PFLU_RS18060 0.27 -2.2 4,098,604 - PFLU_RS18060 0.27 +1.8 4,098,624 + PFLU_RS18060 0.28 -0.7 4,098,624 + PFLU_RS18060 0.28 +1.8 4,098,624 + PFLU_RS18060 0.28 -0.4 4,098,624 + PFLU_RS18060 0.28 -0.6 4,098,624 + PFLU_RS18060 0.28 +3.2 4,098,624 + PFLU_RS18060 0.28 +1.6 4,098,625 - PFLU_RS18060 0.28 -2.7 4,098,738 + PFLU_RS18060 0.34 +1.3 4,098,739 - PFLU_RS18060 0.34 +2.5 4,098,739 - PFLU_RS18060 0.34 +0.4 4,098,794 + PFLU_RS18060 0.37 -1.1 4,098,795 - PFLU_RS18060 0.37 +0.7 4,098,918 + PFLU_RS18060 0.44 +0.8 4,098,919 - PFLU_RS18060 0.44 +1.1 4,098,919 - PFLU_RS18060 0.44 +0.2 4,098,991 + PFLU_RS18060 0.48 -0.3 4,098,992 - PFLU_RS18060 0.48 -0.8
Or see this region's nucleotide sequence