Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17695

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
4,017,833	+				+0.5
4,017,833	+				-1.9
4,017,834	-				-0.1
4,017,834	-				+1.9
4,017,834	-				+0.2
4,017,834	-				+1.6
4,017,862	-				+0.2
4,017,943	+				+0.4
4,017,944	-				-0.1
4,017,944	-				+0.1
4,017,976	+				+0.9
4,017,976	+				-0.8
4,017,977	-				+0.7
4,017,977	-				+0.3
4,017,994	+				-0.5
4,017,994	+				-0.7
4,018,009	+				-0.6
4,018,009	+				+0.0
4,018,009	+				-0.7
4,018,010	-				+0.3
4,018,010	-				+0.6
4,018,010	-				-0.1
4,018,010	-				+0.2
4,018,085	+		PFLU_RS17690	0.15	-0.5
4,018,085	+		PFLU_RS17690	0.15	-0.1
4,018,086	-		PFLU_RS17690	0.15	-0.7
4,018,332	+		PFLU_RS17690	0.65	-0.6
4,018,332	+		PFLU_RS17690	0.65	-0.8
4,018,332	+		PFLU_RS17690	0.65	-0.1
4,018,332	+		PFLU_RS17690	0.65	+0.2
4,018,332	+		PFLU_RS17690	0.65	-0.9
4,018,418	+		PFLU_RS17690	0.82	+0.2
4,018,439	+		PFLU_RS17690	0.87	-0.5
4,018,439	+		PFLU_RS17690	0.87	-0.3
4,018,439	+		PFLU_RS17690	0.87	+0.7
4,018,439	+		PFLU_RS17690	0.87	+2.5
4,018,439	+		PFLU_RS17690	0.87	-1.2
4,018,439	+		PFLU_RS17690	0.87	+0.2
4,018,439	+		PFLU_RS17690	0.87	+2.9
4,018,439	+		PFLU_RS17690	0.87	+0.5
4,018,439	+		PFLU_RS17690	0.87	-0.4
4,018,439	+		PFLU_RS17690	0.87	-0.5
4,018,439	+		PFLU_RS17690	0.87	-1.1
4,018,439	+		PFLU_RS17690	0.87	+0.4
4,018,440	-		PFLU_RS17690	0.87	+0.9
4,018,440	-		PFLU_RS17690	0.87	+0.8
4,018,440	-		PFLU_RS17690	0.87	-0.5
4,018,440	-		PFLU_RS17690	0.87	-1.3
4,018,502	+				-0.4
4,018,502	+				+0.7
4,018,528	+				-0.2
4,018,528	+				+0.2
4,018,528	+				+0.4
4,018,528	+				+0.2
4,018,529	-				-1.4
4,018,529	-				-1.3
4,018,529	-				+1.6
4,018,529	-				+0.9
4,018,536	+				+0.0
4,018,536	+				-0.1
4,018,536	+				-0.5
4,018,536	+				+0.0
4,018,536	+				-1.2
4,018,536	+				-0.3
4,018,536	+				-0.9
4,018,537	-				-0.4
4,018,537	-				-0.1
4,018,537	-				-0.3
4,018,537	-				-0.5
4,018,537	-				-1.7
4,018,544	+				-0.1
4,018,544	+				-1.1
4,018,544	+				+0.4
4,018,544	+				-1.0
4,018,544	+				+1.4
4,018,544	+				-0.7
4,018,545	-				-2.0
4,018,545	-				+0.7
4,018,545	-				+0.9
4,018,545	-				+0.7
4,018,545	-				+0.7
4,018,679	+				-2.1
4,018,679	+				-0.1
4,018,680	-				+0.5
4,018,680	-				+0.5
4,018,680	-				+0.5
4,018,680	-				-0.3
4,018,680	-				+0.6
4,018,711	+				+0.9
4,018,711	+				+0.1
4,018,711	+				-0.5
4,018,808	+				+0.6
4,018,853	+		PFLU_RS17695	0.10	+0.2
4,018,853	+		PFLU_RS17695	0.10	+0.5
4,018,853	+		PFLU_RS17695	0.10	-0.6
4,018,950	+		PFLU_RS17695	0.47	+1.1
4,018,950	+		PFLU_RS17695	0.47	+0.7
4,018,950	+		PFLU_RS17695	0.47	+0.1
4,018,950	+		PFLU_RS17695	0.47	+0.9
4,018,951	-		PFLU_RS17695	0.47	+1.2
4,018,951	-		PFLU_RS17695	0.47	+0.2
4,019,009	-		PFLU_RS17695	0.69	+2.5
4,019,041	-		PFLU_RS17695	0.81	+0.1
4,019,041	-		PFLU_RS17695	0.81	+0.8
4,019,065	+				-1.5
4,019,065	+				+0.6
4,019,066	-				+0.3
4,019,113	+				-0.2
4,019,113	+				-0.4
4,019,117	+				+0.9
4,019,117	+				+0.1
4,019,117	+				+1.2
4,019,117	+				-0.7
4,019,118	-				-0.3
4,019,118	-				+1.3
4,019,118	-				-0.8
4,019,159	+				+0.8
4,019,159	+				+0.3
4,019,180	-				+0.5
4,019,472	+		PFLU_RS17700	0.73	-0.5
4,019,472	+		PFLU_RS17700	0.73	+0.2
4,019,472	+		PFLU_RS17700	0.73	+0.9
4,019,472	+		PFLU_RS17700	0.73	-0.7
4,019,472	+		PFLU_RS17700	0.73	+0.5
4,019,472	+		PFLU_RS17700	0.73	+0.2
4,019,472	+		PFLU_RS17700	0.73	+0.4
4,019,472	+		PFLU_RS17700	0.73	+0.4
4,019,472	+		PFLU_RS17700	0.73	-0.0
4,019,473	-		PFLU_RS17700	0.73	+0.2
4,019,473	-		PFLU_RS17700	0.73	-0.7
4,019,473	-		PFLU_RS17700	0.73	+0.3
4,019,473	-		PFLU_RS17700	0.73	-0.7
4,019,473	-		PFLU_RS17700	0.73	+0.9
4,019,473	-		PFLU_RS17700	0.73	-0.3
4,019,475	-		PFLU_RS17700	0.73	+0.0
4,019,502	+		PFLU_RS17700	0.80	+0.2
4,019,503	-		PFLU_RS17700	0.80	+0.4
4,019,503	-		PFLU_RS17700	0.80	+0.2
4,019,790	+				-0.4
4,019,790	+				+0.3
4,019,791	-				+0.6
4,019,801	-				-1.6
4,019,944	+		PFLU_RS17705	0.33	-1.2