Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17685

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
4,016,401	+				-0.1
4,016,463	+		PFLU_RS17675	0.22	-0.2
4,016,464	-		PFLU_RS17675	0.22	+1.0
4,016,586	+		PFLU_RS17675	0.59	+1.4
4,016,586	+		PFLU_RS17675	0.59	-0.4
4,016,586	+		PFLU_RS17675	0.59	+1.5
4,016,586	+		PFLU_RS17675	0.59	+0.3
4,016,587	-		PFLU_RS17675	0.60	+2.9
4,016,587	-		PFLU_RS17675	0.60	+0.2
4,016,587	-		PFLU_RS17675	0.60	+0.6
4,016,587	-		PFLU_RS17675	0.60	-0.4
4,016,807	-				+0.5
4,016,807	-				+2.2
4,016,812	+				-2.7
4,016,853	+		PFLU_RS17680	0.13	+0.2
4,016,853	+		PFLU_RS17680	0.13	+0.4
4,016,853	+		PFLU_RS17680	0.13	-1.9
4,016,853	+		PFLU_RS17680	0.13	-0.8
4,016,854	-		PFLU_RS17680	0.13	-0.1
4,016,854	-		PFLU_RS17680	0.13	+0.9
4,016,885	+		PFLU_RS17680	0.19	-0.7
4,016,886	-		PFLU_RS17680	0.19	+2.1
4,016,909	+		PFLU_RS17680	0.24	-1.0
4,016,909	+		PFLU_RS17680	0.24	+0.3
4,016,910	-		PFLU_RS17680	0.24	+0.2
4,016,910	-		PFLU_RS17680	0.24	+0.1
4,017,046	+		PFLU_RS17680	0.51	-1.1
4,017,046	+		PFLU_RS17680	0.51	+0.8
4,017,047	-		PFLU_RS17680	0.51	+1.3
4,017,047	-		PFLU_RS17680	0.51	-0.7
4,017,047	-		PFLU_RS17680	0.51	+0.6
4,017,126	-		PFLU_RS17680	0.67	-0.1
4,017,126	-		PFLU_RS17680	0.67	-0.0
4,017,136	-		PFLU_RS17680	0.69	-0.8
4,017,152	+		PFLU_RS17680	0.72	+0.8
4,017,152	+		PFLU_RS17680	0.72	+0.8
4,017,201	+		PFLU_RS17680	0.81	-0.3
4,017,201	+		PFLU_RS17680	0.81	+0.0
4,017,201	+		PFLU_RS17680	0.81	+0.0
4,017,201	+		PFLU_RS17680	0.81	+0.5
4,017,202	-		PFLU_RS17680	0.82	+0.9
4,017,202	-		PFLU_RS17680	0.82	+1.3
4,017,202	-		PFLU_RS17680	0.82	-0.1
4,017,202	-		PFLU_RS17680	0.82	-0.9
4,017,202	-		PFLU_RS17680	0.82	-1.3
4,017,202	-		PFLU_RS17680	0.82	+0.9
4,017,202	-		PFLU_RS17680	0.82	+1.0
4,017,203	+		PFLU_RS17680	0.82	+0.6
4,017,204	-		PFLU_RS17680	0.82	-0.0
4,017,204	-		PFLU_RS17680	0.82	-0.1
4,017,204	-		PFLU_RS17680	0.82	+0.6
4,017,253	+				+0.9
4,017,253	+				-0.7
4,017,253	+				-1.4
4,017,254	-				-1.0
4,017,254	-				-0.3
4,017,520	+		PFLU_RS17685	0.42	+1.5
4,017,534	+		PFLU_RS17685	0.45	-0.1
4,017,534	+		PFLU_RS17685	0.45	+0.6
4,017,534	+		PFLU_RS17685	0.45	-1.1
4,017,535	-		PFLU_RS17685	0.45	+1.9
4,017,535	-		PFLU_RS17685	0.45	-0.3
4,017,545	+		PFLU_RS17685	0.48	+1.1
4,017,565	-		PFLU_RS17685	0.52	+1.5
4,017,593	+		PFLU_RS17685	0.59	-0.1
4,017,593	+		PFLU_RS17685	0.59	-0.3
4,017,593	+		PFLU_RS17685	0.59	+1.0
4,017,594	-		PFLU_RS17685	0.59	+1.1
4,017,709	+		PFLU_RS17685	0.85	+0.1
4,017,709	+		PFLU_RS17685	0.85	+0.9
4,017,710	-		PFLU_RS17685	0.86	-1.3
4,017,710	-		PFLU_RS17685	0.86	+0.5
4,017,804	+				+0.6
4,017,804	+				-0.2
4,017,804	+				+0.3
4,017,804	+				+0.1
4,017,805	-				+0.5
4,017,805	-				-0.1
4,017,805	-				-0.2
4,017,833	+				+0.5
4,017,833	+				-1.9
4,017,834	-				-0.1
4,017,834	-				+1.9
4,017,834	-				+0.2
4,017,834	-				+1.6
4,017,862	-				+0.2
4,017,943	+				+0.4
4,017,944	-				-0.1
4,017,944	-				+0.1
4,017,976	+				+0.9
4,017,976	+				-0.8
4,017,977	-				+0.7
4,017,977	-				+0.3
4,017,994	+				-0.5
4,017,994	+				-0.7
4,018,009	+				-0.6
4,018,009	+				+0.0
4,018,009	+				-0.7
4,018,010	-				+0.3
4,018,010	-				+0.6
4,018,010	-				-0.1
4,018,010	-				+0.2
4,018,085	+		PFLU_RS17690	0.15	-0.5
4,018,085	+		PFLU_RS17690	0.15	-0.1
4,018,086	-		PFLU_RS17690	0.15	-0.7
4,018,332	+		PFLU_RS17690	0.65	-0.6
4,018,332	+		PFLU_RS17690	0.65	-0.8
4,018,332	+		PFLU_RS17690	0.65	-0.1
4,018,332	+		PFLU_RS17690	0.65	+0.2
4,018,332	+		PFLU_RS17690	0.65	-0.9
4,018,418	+		PFLU_RS17690	0.82	+0.2
4,018,439	+		PFLU_RS17690	0.87	-0.5
4,018,439	+		PFLU_RS17690	0.87	-0.3
4,018,439	+		PFLU_RS17690	0.87	+0.7
4,018,439	+		PFLU_RS17690	0.87	+2.5
4,018,439	+		PFLU_RS17690	0.87	-1.2
4,018,439	+		PFLU_RS17690	0.87	+0.2
4,018,439	+		PFLU_RS17690	0.87	+2.9
4,018,439	+		PFLU_RS17690	0.87	+0.5
4,018,439	+		PFLU_RS17690	0.87	-0.4
4,018,439	+		PFLU_RS17690	0.87	-0.5
4,018,439	+		PFLU_RS17690	0.87	-1.1
4,018,439	+		PFLU_RS17690	0.87	+0.4
4,018,440	-		PFLU_RS17690	0.87	+0.9
4,018,440	-		PFLU_RS17690	0.87	+0.8
4,018,440	-		PFLU_RS17690	0.87	-0.5
4,018,440	-		PFLU_RS17690	0.87	-1.3
4,018,502	+				-0.4
4,018,502	+				+0.7
4,018,528	+				-0.2
4,018,528	+				+0.2
4,018,528	+				+0.4
4,018,528	+				+0.2
4,018,529	-				-1.4
4,018,529	-				-1.3
4,018,529	-				+1.6
4,018,529	-				+0.9
4,018,536	+				+0.0
4,018,536	+				-0.1
4,018,536	+				-0.5
4,018,536	+				+0.0
4,018,536	+				-1.2
4,018,536	+				-0.3
4,018,536	+				-0.9
4,018,537	-				-0.4
4,018,537	-				-0.1
4,018,537	-				-0.3
4,018,537	-				-0.5
4,018,537	-				-1.7
4,018,544	+				-0.1
4,018,544	+				-1.1
4,018,544	+				+0.4
4,018,544	+				-1.0
4,018,544	+				+1.4
4,018,544	+				-0.7
4,018,545	-				-2.0
4,018,545	-				+0.7
4,018,545	-				+0.9
4,018,545	-				+0.7
4,018,545	-				+0.7
4,018,679	+				-2.1
4,018,679	+				-0.1
4,018,680	-				+0.5
4,018,680	-				+0.5
4,018,680	-				+0.5
4,018,680	-				-0.3
4,018,680	-				+0.6
4,018,711	+				+0.9
4,018,711	+				+0.1
4,018,711	+				-0.5