Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16310

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
3,700,703	-				-1.9
3,700,899	+		PFLU_RS16300	0.44	+0.3
3,701,026	-		PFLU_RS16300	0.67	-0.2
3,701,053	+		PFLU_RS16300	0.72	-2.0
3,701,056	+		PFLU_RS16300	0.72	-0.5
3,701,056	+		PFLU_RS16300	0.72	+0.9
3,701,056	+		PFLU_RS16300	0.72	+1.8
3,701,057	-		PFLU_RS16300	0.73	+1.1
3,701,092	+		PFLU_RS16300	0.79	-1.2
3,701,092	+		PFLU_RS16300	0.79	-1.6
3,701,171	-				-0.6
3,701,177	+				-0.7
3,701,178	-				-1.8
3,701,178	-				+0.1
3,701,178	-				+0.8
3,701,179	+				-0.1
3,701,209	-				+1.4
3,701,214	+				+0.2
3,701,234	+				-0.7
3,701,254	+				+0.8
3,701,255	-				-0.9
3,701,274	+		PFLU_RS16305	0.10	-0.6
3,701,274	+		PFLU_RS16305	0.10	+1.1
3,701,274	+		PFLU_RS16305	0.10	-0.9
3,701,275	-		PFLU_RS16305	0.10	-0.2
3,701,276	+		PFLU_RS16305	0.10	-1.0
3,701,276	+		PFLU_RS16305	0.10	+0.2
3,701,277	-		PFLU_RS16305	0.11	+0.8
3,701,320	-		PFLU_RS16305	0.21	-0.2
3,701,322	+		PFLU_RS16305	0.22	+0.2
3,701,322	+		PFLU_RS16305	0.22	-0.6
3,701,322	+		PFLU_RS16305	0.22	+0.7
3,701,323	-		PFLU_RS16305	0.22	+0.2
3,701,323	-		PFLU_RS16305	0.22	+0.1
3,701,323	-		PFLU_RS16305	0.22	-0.0
3,701,332	-		PFLU_RS16305	0.24	-0.8
3,701,438	+		PFLU_RS16305	0.50	-0.8
3,701,438	+		PFLU_RS16305	0.50	-1.3
3,701,439	-		PFLU_RS16305	0.50	+0.5
3,701,439	-		PFLU_RS16305	0.50	-0.6
3,701,451	+		PFLU_RS16305	0.53	-0.5
3,701,451	+		PFLU_RS16305	0.53	+0.6
3,701,452	-		PFLU_RS16305	0.53	-1.3
3,701,452	-		PFLU_RS16305	0.53	-0.2
3,701,481	+		PFLU_RS16305	0.60	-0.6
3,701,481	+		PFLU_RS16305	0.60	-0.2
3,701,487	-		PFLU_RS16305	0.62	+0.7
3,701,487	-		PFLU_RS16305	0.62	-0.2
3,701,487	-		PFLU_RS16305	0.62	-1.0
3,701,508	+		PFLU_RS16305	0.67	-0.3
3,701,509	-		PFLU_RS16305	0.67	-0.3
3,701,509	-		PFLU_RS16305	0.67	-0.4
3,701,564	+		PFLU_RS16305	0.81	-0.2
3,701,569	+		PFLU_RS16305	0.82	+0.2
3,701,569	+		PFLU_RS16305	0.82	+1.3
3,701,569	+		PFLU_RS16305	0.82	-1.5
3,701,569	+		PFLU_RS16305	0.82	+1.2
3,701,569	+		PFLU_RS16305	0.82	-0.4
3,701,569	+		PFLU_RS16305	0.82	+0.6
3,701,569	+		PFLU_RS16305	0.82	-0.0
3,701,569	+		PFLU_RS16305	0.82	+1.1
3,701,569	+		PFLU_RS16305	0.82	-0.3
3,701,569	+		PFLU_RS16305	0.82	-0.4
3,701,569	+		PFLU_RS16305	0.82	-0.4
3,701,569	+		PFLU_RS16305	0.82	-1.2
3,701,569	+		PFLU_RS16305	0.82	-1.3
3,701,569	+		PFLU_RS16305	0.82	+1.5
3,701,569	+		PFLU_RS16305	0.82	-1.0
3,701,569	+		PFLU_RS16305	0.82	+0.8
3,701,569	+		PFLU_RS16305	0.82	-1.5
3,701,569	+		PFLU_RS16305	0.82	+0.8
3,701,569	+		PFLU_RS16305	0.82	+1.6
3,701,570	-		PFLU_RS16305	0.82	+1.1
3,701,570	-		PFLU_RS16305	0.82	+1.1
3,701,570	-		PFLU_RS16305	0.82	+0.8
3,701,570	-		PFLU_RS16305	0.82	+0.4
3,701,570	-		PFLU_RS16305	0.82	-3.0
3,701,570	-		PFLU_RS16305	0.82	+0.1
3,701,570	-		PFLU_RS16305	0.82	-0.2
3,701,570	-		PFLU_RS16305	0.82	+0.2
3,701,570	-		PFLU_RS16305	0.82	-0.7
3,701,570	-		PFLU_RS16305	0.82	-1.5
3,701,570	-		PFLU_RS16305	0.82	+1.2
3,701,570	-		PFLU_RS16305	0.82	-0.3
3,701,570	-		PFLU_RS16305	0.82	+0.5
3,701,570	-		PFLU_RS16305	0.82	-0.5
3,701,570	-		PFLU_RS16305	0.82	-0.2
3,701,570	-		PFLU_RS16305	0.82	+0.9
3,701,570	-		PFLU_RS16305	0.82	-1.3
3,701,570	-		PFLU_RS16305	0.82	-0.2
3,701,570	-		PFLU_RS16305	0.82	+0.0
3,701,570	-		PFLU_RS16305	0.82	+0.5
3,701,570	-		PFLU_RS16305	0.82	+1.2
3,701,570	-		PFLU_RS16305	0.82	-0.9
3,701,570	-		PFLU_RS16305	0.82	-2.0
3,701,570	-		PFLU_RS16305	0.82	-0.2
3,701,570	-		PFLU_RS16305	0.82	+1.2
3,701,570	-		PFLU_RS16305	0.82	+2.8
3,701,570	-		PFLU_RS16305	0.82	-1.4
3,701,571	+		PFLU_RS16305	0.82	+1.8
3,701,571	+		PFLU_RS16305	0.82	-1.0
3,701,571	+		PFLU_RS16305	0.82	+0.4
3,701,571	+		PFLU_RS16305	0.82	-1.7
3,701,571	+		PFLU_RS16305	0.82	-0.5
3,701,571	+		PFLU_RS16305	0.82	-1.2
3,701,571	+		PFLU_RS16305	0.82	-1.5
3,701,571	+		PFLU_RS16305	0.82	-0.2
3,701,571	+		PFLU_RS16305	0.82	-0.3
3,701,571	+		PFLU_RS16305	0.82	+0.0
3,701,571	+		PFLU_RS16305	0.82	-0.8
3,701,571	+		PFLU_RS16305	0.82	-0.6
3,701,572	-		PFLU_RS16305	0.82	-0.2
3,701,572	-		PFLU_RS16305	0.82	+0.4
3,701,572	-		PFLU_RS16305	0.82	+0.1
3,701,572	-		PFLU_RS16305	0.82	+0.8
3,701,572	-		PFLU_RS16305	0.82	+0.4
3,701,572	-		PFLU_RS16305	0.82	-0.0
3,701,572	-		PFLU_RS16305	0.82	+0.1
3,701,572	-		PFLU_RS16305	0.82	+1.3
3,701,572	-		PFLU_RS16305	0.82	+0.8
3,701,572	-		PFLU_RS16305	0.82	-0.6
3,701,572	-		PFLU_RS16305	0.82	-0.6
3,701,572	-		PFLU_RS16305	0.82	-1.0
3,701,575	+		PFLU_RS16305	0.83	+2.8
3,701,575	+		PFLU_RS16305	0.83	-0.3
3,701,575	+		PFLU_RS16305	0.83	+2.4
3,701,575	+		PFLU_RS16305	0.83	+0.5
3,701,575	+		PFLU_RS16305	0.83	+0.7
3,701,575	+		PFLU_RS16305	0.83	+0.6
3,701,575	+		PFLU_RS16305	0.83	-1.3
3,701,575	+		PFLU_RS16305	0.83	-0.0
3,701,575	+		PFLU_RS16305	0.83	-0.2
3,701,575	+		PFLU_RS16305	0.83	-0.3
3,701,575	+		PFLU_RS16305	0.83	+0.4
3,701,575	+		PFLU_RS16305	0.83	-0.9
3,701,575	+		PFLU_RS16305	0.83	+0.8
3,701,575	+		PFLU_RS16305	0.83	+1.3
3,701,575	+		PFLU_RS16305	0.83	+0.8
3,701,576	-		PFLU_RS16305	0.83	+0.5
3,701,576	-		PFLU_RS16305	0.83	-0.2
3,701,576	-		PFLU_RS16305	0.83	+0.4
3,701,576	-		PFLU_RS16305	0.83	+1.7
3,701,594	+		PFLU_RS16305	0.88	-0.9
3,701,594	+		PFLU_RS16305	0.88	+0.2
3,701,595	-		PFLU_RS16305	0.88	+1.4
3,701,595	-		PFLU_RS16305	0.88	+0.4
3,701,595	-		PFLU_RS16305	0.88	-0.0
3,701,642	-				+0.2
3,701,774	+		PFLU_RS16310	0.28	-0.0
3,701,830	+		PFLU_RS16310	0.45	+0.8
3,701,831	-		PFLU_RS16310	0.46	+0.8
3,701,834	-		PFLU_RS16310	0.46	+0.2
3,701,948	+		PFLU_RS16310	0.81	+0.7
3,701,949	-		PFLU_RS16310	0.82	+2.0
3,702,015	+				+0.5
3,702,016	-				-0.4
3,702,079	-		PFLU_RS16315	0.12	-1.0
3,702,149	-		PFLU_RS16315	0.24	-1.3
3,702,172	+		PFLU_RS16315	0.27	-0.1
3,702,239	-		PFLU_RS16315	0.39	-0.0
3,702,239	-		PFLU_RS16315	0.39	+0.1
3,702,239	-		PFLU_RS16315	0.39	-1.0
3,702,239	-		PFLU_RS16315	0.39	-0.2
3,702,239	-		PFLU_RS16315	0.39	+0.8
3,702,241	+		PFLU_RS16315	0.39	+0.5
3,702,329	+		PFLU_RS16315	0.54	+0.8
3,702,330	-		PFLU_RS16315	0.54	+0.4
3,702,330	-		PFLU_RS16315	0.54	+1.4
3,702,330	-		PFLU_RS16315	0.54	+0.8
3,702,330	-		PFLU_RS16315	0.54	-0.8
3,702,346	+		PFLU_RS16315	0.57	-1.0
3,702,346	+		PFLU_RS16315	0.57	+1.1
3,702,346	+		PFLU_RS16315	0.57	+0.2
3,702,381	+		PFLU_RS16315	0.63	-0.5
3,702,431	-		PFLU_RS16315	0.71	-0.9
3,702,431	-		PFLU_RS16315	0.71	-0.8
3,702,495	+		PFLU_RS16315	0.82	+1.0
3,702,496	-		PFLU_RS16315	0.82	-1.0
3,702,498	-		PFLU_RS16315	0.83	-0.6
3,702,498	-		PFLU_RS16315	0.83	-1.6
3,702,499	+		PFLU_RS16315	0.83	+3.2
3,702,500	-		PFLU_RS16315	0.83	-0.2
3,702,526	+		PFLU_RS16315	0.87	+0.6
3,702,606	-				+0.2
3,702,606	-				-0.3
3,702,621	+				+0.3
3,702,622	-				+0.8
3,702,625	+				+1.0
3,702,638	+				+0.4
3,702,639	-				-0.2
3,702,641	+				-0.0
3,702,678	+				-0.7
3,702,707	-		PFLU_RS16320	0.12	+0.3
3,702,810	+		PFLU_RS16320	0.44	+0.6
3,702,832	+		PFLU_RS16320	0.50	-0.8
3,702,832	+		PFLU_RS16320	0.50	-0.2
3,702,833	-		PFLU_RS16320	0.51	-0.2
3,702,839	-		PFLU_RS16320	0.53	-1.2
3,702,843	+		PFLU_RS16320	0.54	+0.4
3,702,843	+		PFLU_RS16320	0.54	+0.8
3,702,843	+		PFLU_RS16320	0.54	+1.4
3,702,844	-		PFLU_RS16320	0.54	-0.4
3,702,844	-		PFLU_RS16320	0.54	+0.8
3,702,882	-		PFLU_RS16320	0.66	-0.9
3,702,939	+		PFLU_RS16320	0.83	+0.6
3,702,939	+		PFLU_RS16320	0.83	+0.2
3,702,939	+		PFLU_RS16320	0.83	-0.5
3,702,940	-		PFLU_RS16320	0.83	-0.3
3,702,941	+		PFLU_RS16320	0.84	+0.3
3,702,941	+		PFLU_RS16320	0.84	-0.5
3,702,941	+		PFLU_RS16320	0.84	+0.2
3,702,941	+		PFLU_RS16320	0.84	+1.1
3,702,941	+		PFLU_RS16320	0.84	-0.4
3,702,941	+		PFLU_RS16320	0.84	+1.2
3,702,941	+		PFLU_RS16320	0.84	+0.0
3,702,941	+		PFLU_RS16320	0.84	-0.9
3,702,942	-		PFLU_RS16320	0.84	-2.0
3,702,942	-		PFLU_RS16320	0.84	-2.6
3,702,942	-		PFLU_RS16320	0.84	-0.5
3,702,942	-		PFLU_RS16320	0.84	+0.8
3,702,942	-		PFLU_RS16320	0.84	+0.2
3,702,951	+		PFLU_RS16320	0.87	+2.5
3,702,951	+		PFLU_RS16320	0.87	-0.0
3,702,952	-		PFLU_RS16320	0.87	+1.2
3,702,982	+				-0.3