Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16055

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
3,645,190	-				-0.2
3,645,190	-				-0.6
3,645,190	-				+0.5
3,645,263	+				+2.0
3,645,263	+				-0.3
3,645,264	-				-0.8
3,645,357	-		PFLU_RS16050	0.16	-0.9
3,645,357	-		PFLU_RS16050	0.16	+1.8
3,645,392	+		PFLU_RS16050	0.19	+0.2
3,645,393	-		PFLU_RS16050	0.19	-0.3
3,645,456	+		PFLU_RS16050	0.26	+0.5
3,645,456	+		PFLU_RS16050	0.26	-1.2
3,645,456	+		PFLU_RS16050	0.26	-0.6
3,645,456	+		PFLU_RS16050	0.26	+1.8
3,645,457	-		PFLU_RS16050	0.26	-0.8
3,645,499	-		PFLU_RS16050	0.30	+2.1
3,645,499	-		PFLU_RS16050	0.30	+1.1
3,645,618	-		PFLU_RS16050	0.43	+1.5
3,645,770	+		PFLU_RS16050	0.59	-0.2
3,645,770	+		PFLU_RS16050	0.59	-0.3
3,645,771	-		PFLU_RS16050	0.59	+2.1
3,645,771	-		PFLU_RS16050	0.59	-0.8
3,645,771	-		PFLU_RS16050	0.59	+0.3
3,645,771	-		PFLU_RS16050	0.59	-0.2
3,645,771	-		PFLU_RS16050	0.59	-0.5
3,645,857	+		PFLU_RS16050	0.68	+0.8
3,646,332	+		PFLU_RS16055	0.23	+0.1
3,646,333	-		PFLU_RS16055	0.23	+1.8
3,646,333	-		PFLU_RS16055	0.23	+1.3
3,646,333	-		PFLU_RS16055	0.23	+0.3
3,646,333	-		PFLU_RS16055	0.23	+0.2
3,646,333	-		PFLU_RS16055	0.23	-0.9
3,646,333	-		PFLU_RS16055	0.23	-1.6
3,646,333	-		PFLU_RS16055	0.23	-1.2
3,646,494	+		PFLU_RS16055	0.46	+3.4
3,646,873	+				+0.3
3,646,873	+				-0.6
3,646,873	+				+0.1
3,646,874	-				-0.1
3,646,874	-				+0.8
3,646,912	-				+1.2
3,647,025	+				+0.8
3,647,026	-				+1.5
3,647,207	+		PFLU_RS16060	0.14	+0.8
3,647,207	+		PFLU_RS16060	0.14	-0.5
3,647,207	+		PFLU_RS16060	0.14	+1.8
3,647,208	-		PFLU_RS16060	0.15	+0.3
3,647,208	-		PFLU_RS16060	0.15	+1.6
3,647,403	+		PFLU_RS16060	0.26	+0.5
3,647,403	+		PFLU_RS16060	0.26	+0.2
3,647,403	+		PFLU_RS16060	0.26	-1.2
3,647,403	+		PFLU_RS16060	0.26	-0.2
3,647,404	-		PFLU_RS16060	0.26	+0.1
3,647,460	+		PFLU_RS16060	0.29	-0.1
3,647,460	+		PFLU_RS16060	0.29	+0.6
3,647,461	-		PFLU_RS16060	0.29	+0.6
3,647,764	-		PFLU_RS16060	0.46	+0.2