Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS15795

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
3,580,163	+				+0.2
3,580,164	-				-1.7
3,580,164	-				+0.0
3,580,182	-				-0.6
3,580,429	+		PFLU_RS15790	0.44	-1.7
3,580,459	+		PFLU_RS15790	0.49	-0.1
3,580,534	+		PFLU_RS15790	0.61	+1.1
3,580,534	+		PFLU_RS15790	0.61	-0.3
3,580,534	+		PFLU_RS15790	0.61	-1.5
3,580,534	+		PFLU_RS15790	0.61	-0.9
3,580,535	-		PFLU_RS15790	0.62	-0.4
3,580,535	-		PFLU_RS15790	0.62	-0.0
3,580,535	-		PFLU_RS15790	0.62	-0.2
3,580,535	-		PFLU_RS15790	0.62	-0.4
3,580,767	+				+0.4
3,580,768	-				+0.5
3,580,790	+				+0.3
3,580,810	+				-0.6
3,580,815	-				+0.8
3,580,928	+				+0.8
3,581,095	-				-0.2
3,581,095	-				+0.2
3,581,207	+		PFLU_RS15795	0.12	+0.4
3,581,207	+		PFLU_RS15795	0.12	+1.5
3,581,208	-		PFLU_RS15795	0.12	+0.8
3,581,208	-		PFLU_RS15795	0.12	-2.0
3,581,335	-		PFLU_RS15795	0.44	-0.0
3,581,368	-		PFLU_RS15795	0.52	+1.8
3,581,603	-				+0.1
3,581,626	-				-0.8
3,581,645	-				+0.2
3,581,645	-				-0.2
3,581,645	-				+0.8
3,581,652	-				-0.5
3,581,652	-				-1.8
3,581,652	-				+0.7
3,581,662	-		PFLU_RS15800	0.11	+0.4
3,581,662	-		PFLU_RS15800	0.11	+1.5
3,581,662	-		PFLU_RS15800	0.11	+0.7
3,581,811	-		PFLU_RS15800	0.30	+0.4
3,581,811	-		PFLU_RS15800	0.30	+0.7
3,581,811	-		PFLU_RS15800	0.30	-0.2
3,582,192	+		PFLU_RS15800	0.77	+0.2
3,582,192	+		PFLU_RS15800	0.77	-0.4
3,582,205	+		PFLU_RS15800	0.79	+0.8
3,582,224	+		PFLU_RS15800	0.81	-0.8
3,582,377	-				+0.8
3,582,516	-				-0.8