Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13385

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
3,022,301	+		PFLU_RS13380	0.44	+0.8
3,022,301	+		PFLU_RS13380	0.44	-0.8
3,022,301	+		PFLU_RS13380	0.44	+0.8
3,022,301	+		PFLU_RS13380	0.44	-0.4
3,022,301	+		PFLU_RS13380	0.44	-1.8
3,022,301	+		PFLU_RS13380	0.44	-1.0
3,022,301	+		PFLU_RS13380	0.44	-0.1
3,022,302	-		PFLU_RS13380	0.44	-0.9
3,022,302	-		PFLU_RS13380	0.44	-0.4
3,022,565	+		PFLU_RS13380	0.62	+0.8
3,022,589	+		PFLU_RS13380	0.64	+0.1
3,022,589	+		PFLU_RS13380	0.64	+2.1
3,022,590	-		PFLU_RS13380	0.64	-1.2
3,022,619	+		PFLU_RS13380	0.66	+1.5
3,022,619	+		PFLU_RS13380	0.66	-0.2
3,022,619	+		PFLU_RS13380	0.66	-2.6
3,022,619	+		PFLU_RS13380	0.66	+1.7
3,022,620	-		PFLU_RS13380	0.66	-2.2
3,022,620	-		PFLU_RS13380	0.66	-0.8
3,022,620	-		PFLU_RS13380	0.66	+0.1
3,022,620	-		PFLU_RS13380	0.66	+0.8
3,022,620	-		PFLU_RS13380	0.66	+1.3
3,022,620	-		PFLU_RS13380	0.66	-0.8
3,022,620	-		PFLU_RS13380	0.66	+0.1
3,022,620	-		PFLU_RS13380	0.66	+0.2
3,022,628	+		PFLU_RS13380	0.66	-0.3
3,022,629	-		PFLU_RS13380	0.67	-0.5
3,022,629	-		PFLU_RS13380	0.67	-0.9
3,022,629	-		PFLU_RS13380	0.67	-0.3
3,022,647	+		PFLU_RS13380	0.68	-1.2
3,022,713	-		PFLU_RS13380	0.72	+1.5
3,022,713	-		PFLU_RS13380	0.72	-1.8
3,022,713	-		PFLU_RS13380	0.72	-1.1
3,022,769	+		PFLU_RS13380	0.76	-1.0
3,022,855	+		PFLU_RS13380	0.82	+0.5
3,022,855	+		PFLU_RS13380	0.82	+1.4
3,022,856	-		PFLU_RS13380	0.82	+0.1
3,023,105	+				-1.7
3,023,105	+				+1.2
3,023,105	+				-0.5
3,023,106	-				-0.8
3,023,144	+				-1.2
3,023,144	+				-0.3
3,023,144	+				-0.1
3,023,145	-				-0.6
3,023,145	-				-1.4
3,023,204	+				-0.6
3,023,204	+				-0.3
3,023,204	+				-0.2
3,023,267	+				+0.8
3,023,267	+				-0.8
3,023,267	+				-0.4
3,023,267	+				+0.8
3,023,267	+				+1.1
3,023,268	-				-0.3
3,023,268	-				-0.4
3,023,268	-				+0.2
3,023,268	-				-0.3
3,023,311	-				-0.5
3,023,415	-		PFLU_RS13385	0.14	-0.8
3,023,447	+		PFLU_RS13385	0.16	+2.6
3,023,447	+		PFLU_RS13385	0.16	+2.6
3,023,447	+		PFLU_RS13385	0.16	-0.6
3,023,447	+		PFLU_RS13385	0.16	+0.6
3,023,447	+		PFLU_RS13385	0.16	+0.5
3,023,447	+		PFLU_RS13385	0.16	-1.5
3,023,447	+		PFLU_RS13385	0.16	+1.0
3,023,447	+		PFLU_RS13385	0.16	+2.6
3,023,447	+		PFLU_RS13385	0.16	-0.1
3,023,448	-		PFLU_RS13385	0.17	+1.0
3,023,448	-		PFLU_RS13385	0.17	-0.2
3,023,624	+		PFLU_RS13385	0.28	-0.9
3,023,624	+		PFLU_RS13385	0.28	+0.4
3,023,625	-		PFLU_RS13385	0.28	-0.1
3,023,682	+		PFLU_RS13385	0.32	+0.2
3,023,682	+		PFLU_RS13385	0.32	-0.2
3,023,683	-		PFLU_RS13385	0.32	+1.0
3,023,683	-		PFLU_RS13385	0.32	-0.2
3,023,684	+		PFLU_RS13385	0.32	+0.1
3,023,684	+		PFLU_RS13385	0.32	+0.4
3,023,684	+		PFLU_RS13385	0.32	-0.8
3,023,684	+		PFLU_RS13385	0.32	-0.6
3,023,684	+		PFLU_RS13385	0.32	+0.0
3,023,684	+		PFLU_RS13385	0.32	-0.1
3,023,684	+		PFLU_RS13385	0.32	-0.5
3,023,684	+		PFLU_RS13385	0.32	+0.9
3,023,684	+		PFLU_RS13385	0.32	+0.2
3,023,684	+		PFLU_RS13385	0.32	-0.1
3,023,684	+		PFLU_RS13385	0.32	+0.8
3,023,684	+		PFLU_RS13385	0.32	+2.1
3,023,685	-		PFLU_RS13385	0.33	+1.2
3,023,685	-		PFLU_RS13385	0.33	+0.8
3,023,685	-		PFLU_RS13385	0.33	-0.4
3,023,685	-		PFLU_RS13385	0.33	-0.2
3,023,685	-		PFLU_RS13385	0.33	+0.5
3,023,685	-		PFLU_RS13385	0.33	+0.6
3,023,694	+		PFLU_RS13385	0.33	+0.2
3,023,694	+		PFLU_RS13385	0.33	-2.5
3,023,694	+		PFLU_RS13385	0.33	-0.2
3,023,695	-		PFLU_RS13385	0.33	-0.5
3,023,695	-		PFLU_RS13385	0.33	-0.2
3,023,696	+		PFLU_RS13385	0.33	-1.3
3,023,696	+		PFLU_RS13385	0.33	+0.4
3,023,696	+		PFLU_RS13385	0.33	+0.6
3,023,696	+		PFLU_RS13385	0.33	-1.0
3,023,696	+		PFLU_RS13385	0.33	-0.4
3,023,696	+		PFLU_RS13385	0.33	-0.2
3,023,696	+		PFLU_RS13385	0.33	-0.4
3,023,696	+		PFLU_RS13385	0.33	-0.7
3,023,696	+		PFLU_RS13385	0.33	+0.2
3,023,697	-		PFLU_RS13385	0.33	+0.8
3,023,697	-		PFLU_RS13385	0.33	+0.4
3,023,697	-		PFLU_RS13385	0.33	-0.4
3,023,697	-		PFLU_RS13385	0.33	-1.8
3,023,697	-		PFLU_RS13385	0.33	+0.6
3,023,697	-		PFLU_RS13385	0.33	+0.7
3,023,697	-		PFLU_RS13385	0.33	+0.1
3,023,697	-		PFLU_RS13385	0.33	-0.8
3,023,697	-		PFLU_RS13385	0.33	-1.2
3,023,697	-		PFLU_RS13385	0.33	-0.6
3,023,697	-		PFLU_RS13385	0.33	-1.8
3,023,697	-		PFLU_RS13385	0.33	-0.7
3,023,762	+		PFLU_RS13385	0.38	+0.5
3,023,762	+		PFLU_RS13385	0.38	+0.0
3,023,762	+		PFLU_RS13385	0.38	-0.6
3,023,763	-		PFLU_RS13385	0.38	-0.9
3,023,814	-		PFLU_RS13385	0.41	+1.1
3,024,278	+		PFLU_RS13385	0.73	-3.5
3,024,279	-		PFLU_RS13385	0.73	-0.9
3,024,309	+		PFLU_RS13385	0.75	+0.2
3,024,309	+		PFLU_RS13385	0.75	+0.4
3,024,428	+		PFLU_RS13385	0.83	-0.5
3,024,428	+		PFLU_RS13385	0.83	+0.8
3,024,429	-		PFLU_RS13385	0.83	+0.1
3,024,443	+		PFLU_RS13385	0.84	-0.3
3,024,532	-		PFLU_RS13385	0.90	+1.6
3,024,551	+				+0.4
3,024,551	+				-1.6
3,024,551	+				-0.6
3,024,551	+				-1.4
3,024,551	+				+0.2
3,024,551	+				-1.0
3,024,552	-				-0.6
3,024,552	-				-0.2
3,024,554	+				-2.0
3,024,555	-				-0.4
3,024,555	-				+1.2
3,024,555	-				+1.2
3,024,555	-				+0.3
3,024,555	-				+2.2
3,024,555	-				+0.8
3,024,592	-				+1.1
3,024,626	+				-2.3
3,024,641	-				+0.2
3,024,672	+				-0.9
3,024,673	-				+0.1
3,024,685	-				-0.3
3,024,692	+				-1.2
3,024,692	+				+0.1
3,024,692	+				+1.8
3,024,693	-				+0.2
3,024,701	+				-1.2
3,024,801	-				+2.8
3,024,928	+		PFLU_RS13390	0.20	-2.4
3,024,928	+		PFLU_RS13390	0.20	-0.2
3,024,928	+		PFLU_RS13390	0.20	+0.2
3,024,929	-		PFLU_RS13390	0.20	-1.2
3,024,929	-		PFLU_RS13390	0.20	-0.8
3,024,929	-		PFLU_RS13390	0.20	+0.4
3,025,154	+		PFLU_RS13390	0.40	+0.8
3,025,154	+		PFLU_RS13390	0.40	+0.3
3,025,154	+		PFLU_RS13390	0.40	-1.2
3,025,154	+		PFLU_RS13390	0.40	-1.0
3,025,155	-		PFLU_RS13390	0.41	+0.3
3,025,155	-		PFLU_RS13390	0.41	-0.9
3,025,253	+		PFLU_RS13390	0.49	-1.2
3,025,253	+		PFLU_RS13390	0.49	-1.8
3,025,253	+		PFLU_RS13390	0.49	+0.6
3,025,253	+		PFLU_RS13390	0.49	-0.4
3,025,253	+		PFLU_RS13390	0.49	-0.8
3,025,253	+		PFLU_RS13390	0.49	+1.0
3,025,253	+		PFLU_RS13390	0.49	-0.9
3,025,253	+		PFLU_RS13390	0.49	-0.8
3,025,253	+		PFLU_RS13390	0.49	+0.8
3,025,253	+		PFLU_RS13390	0.49	-0.2
3,025,253	+		PFLU_RS13390	0.49	-0.9
3,025,253	+		PFLU_RS13390	0.49	-1.1
3,025,254	-		PFLU_RS13390	0.49	-0.2
3,025,254	-		PFLU_RS13390	0.49	+1.6
3,025,254	-		PFLU_RS13390	0.49	+0.5
3,025,254	-		PFLU_RS13390	0.49	+0.3
3,025,254	-		PFLU_RS13390	0.49	-0.0
3,025,254	-		PFLU_RS13390	0.49	-0.9
3,025,278	+		PFLU_RS13390	0.52	+0.4
3,025,279	-		PFLU_RS13390	0.52	-0.4
3,025,431	+		PFLU_RS13390	0.65	-0.0
3,025,559	+		PFLU_RS13390	0.77	-1.0
3,025,568	+		PFLU_RS13390	0.78	+0.6
3,025,568	+		PFLU_RS13390	0.78	-0.5
3,025,569	-		PFLU_RS13390	0.78	-0.5