Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13205

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
2,986,187	+		PFLU_RS13200	0.11	+1.0
2,986,230	+		PFLU_RS13200	0.16	+0.2
2,986,258	+		PFLU_RS13200	0.18	+0.4
2,986,258	+		PFLU_RS13200	0.18	+0.1
2,986,258	+		PFLU_RS13200	0.18	+1.2
2,986,258	+		PFLU_RS13200	0.18	+0.3
2,986,259	-		PFLU_RS13200	0.18	+0.0
2,986,840	-		PFLU_RS13200	0.74	-0.9
2,987,162	+				-1.0
2,987,191	-		PFLU_RS13205	0.11	+0.7
2,987,242	+		PFLU_RS13205	0.26	+0.8
2,987,243	-		PFLU_RS13205	0.27	+1.0
2,987,243	-		PFLU_RS13205	0.27	-0.3
2,987,243	-		PFLU_RS13205	0.27	-0.8
2,987,243	-		PFLU_RS13205	0.27	+0.3
2,987,243	-		PFLU_RS13205	0.27	+1.4
2,987,243	-		PFLU_RS13205	0.27	-0.2
2,987,243	-		PFLU_RS13205	0.27	-0.6
2,987,496	+				-0.4
2,987,496	+				+2.4
2,987,496	+				+1.8
2,987,496	+				+0.6
2,987,496	+				+0.2
2,987,497	-				+0.2
2,987,497	-				+0.8
2,987,598	+				-1.7
2,987,598	+				+0.3
2,987,598	+				+0.9
2,987,598	+				+0.9
2,987,598	+				+1.2
2,987,598	+				+0.5
2,987,598	+				-1.0
2,987,599	-				+1.5
2,987,599	-				-1.0
2,987,599	-				+0.5
2,987,599	-				-0.0
2,987,599	-				+0.6
2,987,599	-				+0.2
2,987,599	-				-0.1
2,987,599	-				-0.8
2,987,599	-				-0.4
2,987,599	-				-0.4
2,987,599	-				+0.2
2,987,605	+				-0.9
2,987,605	+				+0.1
2,987,605	+				-0.6
2,987,605	+				-0.1
2,987,606	-				-1.1
2,987,606	-				-1.0
2,987,606	-				-1.4
2,987,606	-				-0.6
2,987,606	-				-2.3
2,987,606	-				+0.2
2,987,606	-				-0.6
2,987,606	-				+0.5
2,987,606	-				-2.0
2,987,606	-				+1.0
2,987,606	-				-1.7
2,987,606	-				+0.4
2,987,617	+				+0.5
2,987,618	-				+1.4
2,987,618	-				-0.9
2,987,618	-				+0.0
2,987,618	-				-1.1
2,987,618	-				-0.0
2,987,633	-				+1.2
2,987,633	-				+0.4
2,987,633	-				+1.6
2,987,633	-				-0.7
2,987,633	-				+0.8
2,987,710	+		PFLU_RS13210	0.27	-0.3
2,987,711	-		PFLU_RS13210	0.27	-0.8
2,987,893	+				+0.8
2,987,893	+				-0.2
2,987,894	-				+0.5
2,987,894	-				+0.6
2,988,276	+		PFLU_RS13215	0.44	-0.3
2,988,343	+		PFLU_RS13215	0.52	+1.8