Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13065

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
2,952,329	+				+0.2
2,952,330	-				+0.8
2,953,280	+				+1.8
2,953,281	-				+0.1
2,953,281	-				+1.1
2,953,284	+				-1.2
2,953,284	+				-2.0
2,953,284	+				-0.3
2,953,284	+				-0.3
2,953,284	+				+1.2
2,953,284	+				+0.4
2,953,285	-				+0.0
2,953,285	-				+1.4
2,953,285	-				+1.0
2,953,320	-				-0.9
2,953,350	+				+0.5
2,953,571	+		PFLU_RS13065	0.32	+0.4
2,953,571	+		PFLU_RS13065	0.32	-0.7
2,953,571	+		PFLU_RS13065	0.32	+1.6
2,953,571	+		PFLU_RS13065	0.32	+1.6
2,953,571	+		PFLU_RS13065	0.32	-0.5
2,953,571	+		PFLU_RS13065	0.32	+0.7
2,953,572	-		PFLU_RS13065	0.32	-0.2
2,953,659	+		PFLU_RS13065	0.41	+1.7
2,953,659	+		PFLU_RS13065	0.41	+0.2
2,953,660	-		PFLU_RS13065	0.41	-0.2
2,953,660	-		PFLU_RS13065	0.41	+0.8
2,953,660	-		PFLU_RS13065	0.41	+2.2
2,953,660	-		PFLU_RS13065	0.41	+0.5
2,953,660	-		PFLU_RS13065	0.41	+0.4
2,953,660	-		PFLU_RS13065	0.41	-0.7
2,953,660	-		PFLU_RS13065	0.41	-0.2
2,953,941	+		PFLU_RS13065	0.70	+0.3
2,953,942	-		PFLU_RS13065	0.70	+0.7
2,953,992	-		PFLU_RS13065	0.75	+0.8
2,954,032	-		PFLU_RS13065	0.79	+1.8
2,954,067	+		PFLU_RS13065	0.83	+1.0
2,954,067	+		PFLU_RS13065	0.83	+0.5
2,954,121	+		PFLU_RS13065	0.88	+0.8
2,954,121	+		PFLU_RS13065	0.88	+1.4
2,954,121	+		PFLU_RS13065	0.88	+1.3
2,954,136	+		PFLU_RS13065	0.90	+1.2
2,954,137	-				-0.2
2,954,137	-				-1.3
2,954,586	+		PFLU_RS13070	0.23	-0.4
2,954,778	-		PFLU_RS13070	0.37	+0.4
2,954,814	-		PFLU_RS13070	0.40	+0.2
2,954,892	+		PFLU_RS13070	0.46	+0.9
2,954,990	+		PFLU_RS13070	0.53	+1.4
2,954,990	+		PFLU_RS13070	0.53	-0.7
2,954,990	+		PFLU_RS13070	0.53	+0.2
2,954,991	-		PFLU_RS13070	0.53	-0.3
2,954,991	-		PFLU_RS13070	0.53	-0.8
2,954,991	-		PFLU_RS13070	0.53	-0.3
2,954,994	+		PFLU_RS13070	0.53	+0.5
2,954,994	+		PFLU_RS13070	0.53	-0.9
2,954,994	+		PFLU_RS13070	0.53	-0.5
2,954,994	+		PFLU_RS13070	0.53	-0.3
2,954,994	+		PFLU_RS13070	0.53	+0.5
2,954,994	+		PFLU_RS13070	0.53	-0.2
2,954,994	+		PFLU_RS13070	0.53	-1.1
2,954,994	+		PFLU_RS13070	0.53	+0.8
2,954,994	+		PFLU_RS13070	0.53	+0.6
2,954,994	+		PFLU_RS13070	0.53	-1.0
2,954,994	+		PFLU_RS13070	0.53	+0.2
2,954,994	+		PFLU_RS13070	0.53	+1.0
2,954,994	+		PFLU_RS13070	0.53	-0.3
2,954,994	+		PFLU_RS13070	0.53	+0.3
2,954,994	+		PFLU_RS13070	0.53	+0.2
2,954,994	+		PFLU_RS13070	0.53	-0.4
2,954,994	+		PFLU_RS13070	0.53	+0.3
2,954,994	+		PFLU_RS13070	0.53	-0.2
2,954,995	-		PFLU_RS13070	0.53	+0.2
2,954,995	-		PFLU_RS13070	0.53	+1.4
2,954,995	-		PFLU_RS13070	0.53	+0.5
2,954,995	-		PFLU_RS13070	0.53	+0.1
2,954,995	-		PFLU_RS13070	0.53	-0.5
2,954,995	-		PFLU_RS13070	0.53	+1.1
2,954,995	-		PFLU_RS13070	0.53	+0.4
2,954,995	-		PFLU_RS13070	0.53	+0.1
2,954,995	-		PFLU_RS13070	0.53	-1.2
2,954,995	-		PFLU_RS13070	0.53	-1.5
2,954,995	-		PFLU_RS13070	0.53	+0.6
2,954,995	-		PFLU_RS13070	0.53	+0.6
2,954,995	-		PFLU_RS13070	0.53	-0.8
2,954,995	-		PFLU_RS13070	0.53	-0.7
2,954,995	-		PFLU_RS13070	0.53	+1.2
2,954,995	-		PFLU_RS13070	0.53	+1.6
2,954,995	-		PFLU_RS13070	0.53	+1.1
2,954,995	-		PFLU_RS13070	0.53	+1.6
2,954,995	-		PFLU_RS13070	0.53	+0.8
2,954,995	-		PFLU_RS13070	0.53	-1.2
2,954,995	-		PFLU_RS13070	0.53	+2.2
2,954,995	-		PFLU_RS13070	0.53	-0.5
2,954,995	-		PFLU_RS13070	0.53	+0.3
2,954,995	-		PFLU_RS13070	0.53	-0.2
2,954,995	-		PFLU_RS13070	0.53	-0.5
2,954,995	-		PFLU_RS13070	0.53	+1.8
2,954,995	-		PFLU_RS13070	0.53	-1.5
2,954,995	-		PFLU_RS13070	0.53	+0.2
2,955,108	-		PFLU_RS13070	0.62	+0.1
2,955,168	-		PFLU_RS13070	0.66	+1.4
2,955,168	-		PFLU_RS13070	0.66	+1.6
2,955,187	+		PFLU_RS13070	0.68	-0.3
2,955,187	+		PFLU_RS13070	0.68	+0.6