Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12615

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
2,848,234	+		PFLU_RS12610	0.16	-0.1
2,848,418	-		PFLU_RS12610	0.34	+0.7
2,848,561	+		PFLU_RS12610	0.48	-1.3
2,848,561	+		PFLU_RS12610	0.48	-1.4
2,848,561	+		PFLU_RS12610	0.48	-0.9
2,848,561	+		PFLU_RS12610	0.48	+0.4
2,848,561	+		PFLU_RS12610	0.48	-1.3
2,848,561	+		PFLU_RS12610	0.48	-0.4
2,848,561	+		PFLU_RS12610	0.48	+0.4
2,848,562	-		PFLU_RS12610	0.48	-1.1
2,848,562	-		PFLU_RS12610	0.48	-0.5
2,848,562	-		PFLU_RS12610	0.48	-0.8
2,848,562	-		PFLU_RS12610	0.48	-0.2
2,848,562	-		PFLU_RS12610	0.48	-1.0
2,848,562	-		PFLU_RS12610	0.48	-2.3
2,848,562	-		PFLU_RS12610	0.48	+2.9
2,848,610	+		PFLU_RS12610	0.53	+0.8
2,848,610	+		PFLU_RS12610	0.53	+0.1
2,848,610	+		PFLU_RS12610	0.53	-1.2
2,848,610	+		PFLU_RS12610	0.53	-1.7
2,848,610	+		PFLU_RS12610	0.53	-0.0
2,848,611	-		PFLU_RS12610	0.53	+0.2
2,848,611	-		PFLU_RS12610	0.53	-1.0
2,848,636	+		PFLU_RS12610	0.56	-0.5
2,848,636	+		PFLU_RS12610	0.56	-0.7
2,848,636	+		PFLU_RS12610	0.56	-0.1
2,848,636	+		PFLU_RS12610	0.56	-0.1
2,848,636	+		PFLU_RS12610	0.56	+0.5
2,848,636	+		PFLU_RS12610	0.56	-0.7
2,848,636	+		PFLU_RS12610	0.56	-0.1
2,848,636	+		PFLU_RS12610	0.56	-2.1
2,848,637	-		PFLU_RS12610	0.56	+0.5
2,848,637	-		PFLU_RS12610	0.56	+0.0
2,848,637	-		PFLU_RS12610	0.56	+0.0
2,848,637	-		PFLU_RS12610	0.56	-0.1
2,848,637	-		PFLU_RS12610	0.56	-0.6
2,848,637	-		PFLU_RS12610	0.56	+0.9
2,848,637	-		PFLU_RS12610	0.56	-0.2
2,848,637	-		PFLU_RS12610	0.56	-0.7
2,848,637	-		PFLU_RS12610	0.56	+0.9
2,848,637	-		PFLU_RS12610	0.56	+0.4
2,848,637	-		PFLU_RS12610	0.56	-0.7
2,848,774	+		PFLU_RS12610	0.69	+0.7
2,848,775	-		PFLU_RS12610	0.70	+0.0
2,848,793	+		PFLU_RS12610	0.71	+0.9
2,848,793	+		PFLU_RS12610	0.71	-0.1
2,848,794	-		PFLU_RS12610	0.71	+0.3
2,848,794	-		PFLU_RS12610	0.71	-0.7
2,848,909	+		PFLU_RS12610	0.83	+1.1
2,848,909	+		PFLU_RS12610	0.83	-1.4
2,848,909	+		PFLU_RS12610	0.83	+0.9
2,848,909	+		PFLU_RS12610	0.83	-0.5
2,848,909	+		PFLU_RS12610	0.83	-0.5
2,848,909	+		PFLU_RS12610	0.83	-2.5
2,848,910	-		PFLU_RS12610	0.83	+1.1
2,848,910	-		PFLU_RS12610	0.83	+0.4
2,848,910	-		PFLU_RS12610	0.83	+1.2
2,849,013	+				+0.0
2,849,014	-				+1.4
2,849,074	+				-0.0
2,849,075	-				+1.2
2,849,102	-				-1.7
2,849,102	-				+0.7
2,849,102	-				-0.1
2,849,177	+				-0.3
2,849,177	+				-0.8
2,849,177	+				+1.2
2,849,178	-				+0.0
2,849,178	-				+1.0
2,849,178	-				+0.7
2,849,192	-				-0.4
2,849,393	+		PFLU_RS12615	0.21	-0.1
2,849,411	-		PFLU_RS12615	0.23	+0.3
2,849,559	+		PFLU_RS12615	0.37	+0.0
2,849,634	+		PFLU_RS12615	0.44	+0.9
2,849,732	-		PFLU_RS12615	0.54	-0.7
2,849,757	+		PFLU_RS12615	0.56	+0.5
2,849,758	-		PFLU_RS12615	0.56	+1.9
2,849,758	-		PFLU_RS12615	0.56	-0.6
2,849,758	-		PFLU_RS12615	0.56	+0.1
2,849,898	+		PFLU_RS12615	0.70	+0.7
2,849,899	-		PFLU_RS12615	0.70	+2.0
2,850,120	+				+0.6
2,850,121	-				-1.8
2,850,121	-				+0.1
2,850,121	-				-2.4
2,850,121	-				+0.4
2,850,143	+				-0.1
2,850,143	+				+1.2
2,850,143	+				+0.2
2,850,143	+				+0.7
2,850,143	+				+0.0
2,850,143	+				+0.0
2,850,143	+				+1.1
2,850,144	-				-0.5
2,850,144	-				-2.0
2,850,144	-				+0.3
2,850,144	-				-0.8
2,850,144	-				-1.0
2,850,144	-				-1.5
2,850,144	-				+1.9
2,850,144	-				+0.2
2,850,144	-				+1.3
2,850,265	+				-0.6
2,850,265	+				+2.4
2,850,265	+				-1.1
2,850,266	-				+0.1
2,850,266	-				-1.6
2,850,266	-				-0.4
2,850,266	-				+1.3
2,850,266	-				-0.3
2,850,266	-				+0.9
2,850,266	-				-0.3
2,850,270	+				+0.1
2,850,270	+				-0.1
2,850,270	+				-0.5
2,850,270	+				-1.5
2,850,270	+				+0.2
2,850,271	-				-0.8
2,850,271	-				+0.3
2,850,271	-				-0.8
2,850,271	-				+0.0
2,850,353	+				-0.7
2,850,353	+				+2.1
2,850,353	+				+0.1
2,850,353	+				+1.9
2,850,412	+				-1.1
2,850,413	-				-0.9
2,850,426	+				-1.3
2,850,426	+				+0.4
2,850,427	-				+1.9
2,850,641	+				-0.7
2,850,641	+				-0.7
2,850,682	+		PFLU_RS12620	0.13	+0.9
2,850,683	-		PFLU_RS12620	0.13	+0.3
2,850,683	-		PFLU_RS12620	0.13	-0.3
2,850,718	+		PFLU_RS12620	0.17	-0.3
2,850,801	+		PFLU_RS12620	0.26	+0.4
2,850,802	-		PFLU_RS12620	0.26	+0.6
2,850,802	-		PFLU_RS12620	0.26	+0.5
2,850,994	+		PFLU_RS12620	0.46	-0.0
2,850,994	+		PFLU_RS12620	0.46	+0.2
2,850,994	+		PFLU_RS12620	0.46	+0.3
2,850,994	+		PFLU_RS12620	0.46	+0.0
2,850,994	+		PFLU_RS12620	0.46	+0.7
2,850,994	+		PFLU_RS12620	0.46	+0.9
2,850,995	-		PFLU_RS12620	0.47	-0.1
2,850,995	-		PFLU_RS12620	0.47	+0.6
2,850,995	-		PFLU_RS12620	0.47	-1.5
2,850,995	-		PFLU_RS12620	0.47	+1.4
2,851,106	-		PFLU_RS12620	0.58	-1.8