Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12520

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
2,824,281	+				-1.1
2,824,281	+				-1.0
2,824,281	+				-1.1
2,824,282	-				+1.0
2,824,282	-				-0.4
2,824,282	-				-0.1
2,824,282	-				-0.1
2,824,289	+				+0.7
2,824,526	-		PFLU_RS12515	0.32	-0.7
2,824,594	+		PFLU_RS12515	0.46	+0.6
2,824,594	+		PFLU_RS12515	0.46	-0.3
2,824,595	-		PFLU_RS12515	0.46	+0.4
2,824,595	-		PFLU_RS12515	0.46	+1.3
2,824,595	-		PFLU_RS12515	0.46	+1.4
2,824,595	-		PFLU_RS12515	0.46	+0.6
2,824,609	+		PFLU_RS12515	0.49	+0.4
2,824,610	-		PFLU_RS12515	0.50	-1.6
2,824,675	+		PFLU_RS12515	0.63	+0.6
2,824,675	+		PFLU_RS12515	0.63	+0.5
2,824,675	+		PFLU_RS12515	0.63	-0.6
2,824,675	+		PFLU_RS12515	0.63	+0.5
2,824,676	-		PFLU_RS12515	0.64	+0.3
2,824,676	-		PFLU_RS12515	0.64	-1.5
2,824,676	-		PFLU_RS12515	0.64	-0.1
2,824,713	+		PFLU_RS12515	0.72	+0.9
2,824,713	+		PFLU_RS12515	0.72	+0.9
2,824,713	+		PFLU_RS12515	0.72	+0.1
2,824,714	-		PFLU_RS12515	0.72	-0.1
2,824,714	-		PFLU_RS12515	0.72	-0.7
2,824,717	+		PFLU_RS12515	0.72	-0.1
2,824,717	+		PFLU_RS12515	0.72	+0.1
2,824,717	+		PFLU_RS12515	0.72	+0.2
2,824,718	-		PFLU_RS12515	0.73	+0.0
2,824,718	-		PFLU_RS12515	0.73	-0.5
2,824,718	-		PFLU_RS12515	0.73	+0.3
2,824,787	+		PFLU_RS12515	0.87	-0.2
2,824,802	+				-0.4
2,824,803	-				-0.3
2,824,804	+				+1.3
2,824,804	+				-0.6
2,824,804	+				+0.1
2,824,804	+				-0.3
2,824,804	+				-1.1
2,824,805	-				-2.5
2,824,805	-				-0.1
2,824,805	-				-0.7
2,824,829	-				-0.1
2,824,857	+				-2.9
2,824,857	+				-0.7
2,824,857	+				+0.0
2,824,857	+				+0.6
2,824,857	+				+0.7
2,824,857	+				-2.1
2,824,857	+				-1.6
2,824,857	+				+0.5
2,824,857	+				+0.4
2,824,857	+				+0.3
2,824,857	+				+0.2
2,824,857	+				-0.4
2,824,857	+				+0.1
2,824,857	+				+0.7
2,824,857	+				-0.9
2,824,857	+				-0.0
2,824,857	+				-0.1
2,824,857	+				-0.9
2,824,857	+				-0.0
2,824,857	+				-0.6
2,824,857	+				+0.9
2,824,857	+				+0.5
2,824,857	+				-0.1
2,824,857	+				+0.4
2,824,857	+				-0.5
2,824,857	+				-0.1
2,824,857	+				+1.0
2,824,857	+				+0.3
2,824,857	+				+1.9
2,824,857	+				+0.9
2,824,857	+				+0.1
2,824,857	+				-0.9
2,824,857	+				+1.3
2,824,857	+				+0.3
2,824,857	+				-0.7
2,824,857	+				-0.7
2,824,857	+				+0.5
2,824,857	+				+0.6
2,824,857	+				-1.4
2,824,857	+				+0.2
2,824,857	+				+0.5
2,824,857	+				+0.3
2,824,858	-				+0.1
2,824,858	-				+0.3
2,824,858	-				-0.1
2,824,858	-				+0.1
2,824,858	-				-0.1
2,824,858	-				+0.9
2,824,858	-				-0.7
2,824,858	-				+0.6
2,824,858	-				+0.3
2,824,858	-				+1.2
2,824,858	-				-0.1
2,824,858	-				+1.3
2,824,858	-				+0.3
2,824,858	-				+0.1
2,824,858	-				-0.7
2,824,858	-				+0.1
2,824,858	-				+0.2
2,824,858	-				+0.3
2,824,858	-				+1.1
2,824,858	-				-0.9
2,824,858	-				+1.9
2,824,858	-				+0.1
2,824,858	-				-0.7
2,824,858	-				-2.3
2,824,858	-				+0.2
2,824,858	-				-1.5
2,824,858	-				-0.4
2,824,858	-				-0.7
2,824,858	-				-0.1
2,824,861	+				-0.3
2,824,861	+				-0.1
2,824,861	+				-0.4
2,824,861	+				+0.7
2,824,861	+				-0.2
2,824,862	-				+1.9
2,824,862	-				-0.1
2,824,862	-				+1.3
2,824,862	-				-0.4
2,824,862	-				-0.1
2,824,868	+				+0.7
2,824,869	-				+0.9
2,824,869	-				+0.9
2,824,869	-				+0.9
2,824,869	-				+0.1
2,824,869	-				+0.4
2,824,869	-				-0.5
2,824,963	+				+0.3
2,824,963	+				+0.2
2,824,963	+				+1.3
2,824,966	+				+0.9
2,824,966	+				-2.1
2,824,966	+				+1.9
2,824,966	+				+0.6
2,824,966	+				-0.2
2,824,966	+				+0.6
2,824,966	+				-0.1
2,824,966	+				-0.7
2,824,967	-				-0.1
2,824,967	-				-1.6
2,824,967	-				-0.3
2,824,967	-				-1.1
2,824,967	-				+0.1
2,824,967	-				+0.1
2,824,967	-				+1.3
2,825,035	+				+0.1
2,825,035	+				+1.2
2,825,035	+				-0.3
2,825,035	+				-2.5
2,825,039	+				-0.1
2,825,039	+				+0.4
2,825,039	+				+1.0
2,825,039	+				+0.7
2,825,122	+				-1.1
2,825,122	+				+0.1
2,825,122	+				+0.6
2,825,122	+				-0.6
2,825,138	-				+1.1
2,825,138	-				+0.6
2,825,138	-				-0.7
2,825,162	+				+0.6
2,825,162	+				-0.7
2,825,162	+				-0.6
2,825,162	+				+1.9
2,825,162	+				+0.9
2,825,162	+				+0.4
2,825,162	+				+1.3
2,825,162	+				+0.1
2,825,162	+				-0.4
2,825,162	+				-0.5
2,825,163	-				+2.3
2,825,163	-				+0.1
2,825,163	-				+0.3
2,825,163	-				-0.3
2,825,163	-				-0.4
2,825,163	-				+0.9
2,825,163	-				-0.0
2,825,163	-				-0.4
2,825,163	-				-1.1
2,825,163	-				-1.4
2,825,163	-				+1.5
2,825,163	-				-0.6
2,825,163	-				-0.7
2,825,166	+				-0.6
2,825,166	+				-0.0
2,825,166	+				-0.8
2,825,166	+				-0.1
2,825,166	+				+0.1
2,825,166	+				+0.4
2,825,166	+				-1.1
2,825,167	-				-0.2
2,825,167	-				+0.9
2,825,242	+				-1.1
2,825,247	+				-0.3
2,825,247	+				+0.3
2,825,248	-				+0.4
2,825,275	-				-1.5
2,825,275	-				+0.6
2,825,303	-				-0.9
2,825,488	+		PFLU_RS12520	0.47	-0.1
2,825,488	+		PFLU_RS12520	0.47	+1.6
2,825,488	+		PFLU_RS12520	0.47	+0.2
2,825,488	+		PFLU_RS12520	0.47	+0.9
2,825,488	+		PFLU_RS12520	0.47	+0.6
2,825,488	+		PFLU_RS12520	0.47	+0.4
2,825,488	+		PFLU_RS12520	0.47	+0.0
2,825,489	-		PFLU_RS12520	0.47	+1.7
2,825,489	-		PFLU_RS12520	0.47	+0.5
2,825,489	-		PFLU_RS12520	0.47	+0.1
2,825,489	-		PFLU_RS12520	0.47	-1.9
2,825,489	-		PFLU_RS12520	0.47	-0.3
2,825,489	-		PFLU_RS12520	0.47	+0.5
2,825,489	-		PFLU_RS12520	0.47	+0.2
2,825,489	-		PFLU_RS12520	0.47	-0.3
2,825,716	+				+0.5
2,825,716	+				-1.3
2,825,717	-				-1.0
2,825,717	-				+0.6
2,825,717	-				+0.0
2,825,717	-				-0.1
2,825,723	+				+1.5
2,825,724	-				-0.9
2,825,777	+				+0.3
2,825,777	+				+0.5
2,825,777	+				+0.4
2,825,778	-				-0.6
2,825,778	-				-1.5
2,825,778	-				-0.5
2,825,778	-				+0.0
2,825,778	-				-2.5
2,825,792	+				-2.1
2,825,792	+				-0.9
2,825,792	+				+0.4
2,825,792	+				-0.1
2,825,792	+				-0.1
2,825,793	-				+0.9
2,825,793	-				-1.6
2,825,793	-				+0.4
2,825,813	+				-1.7
2,825,861	+				-1.0
2,825,862	-				+1.3
2,825,910	-				+1.3
2,825,960	+		PFLU_RS12525	0.11	-0.4
2,825,961	-		PFLU_RS12525	0.11	+0.9
2,825,961	-		PFLU_RS12525	0.11	-1.1
2,825,961	-		PFLU_RS12525	0.11	+0.2
2,825,961	-		PFLU_RS12525	0.11	-2.1
2,826,008	+		PFLU_RS12525	0.13	+0.4
2,826,008	+		PFLU_RS12525	0.13	-1.3
2,826,008	+		PFLU_RS12525	0.13	+0.2
2,826,008	+		PFLU_RS12525	0.13	+0.7
2,826,008	+		PFLU_RS12525	0.13	+0.4
2,826,017	+		PFLU_RS12525	0.14	+0.0
2,826,017	+		PFLU_RS12525	0.14	-0.4
2,826,065	+		PFLU_RS12525	0.16	+0.0
2,826,197	+		PFLU_RS12525	0.22	+0.7
2,826,197	+		PFLU_RS12525	0.22	-0.7
2,826,197	+		PFLU_RS12525	0.22	+0.1
2,826,197	+		PFLU_RS12525	0.22	+1.6
2,826,198	-		PFLU_RS12525	0.22	-0.9
2,826,198	-		PFLU_RS12525	0.22	+0.2
2,826,198	-		PFLU_RS12525	0.22	+0.3
2,826,198	-		PFLU_RS12525	0.22	-0.4
2,826,198	-		PFLU_RS12525	0.22	+0.3
2,826,198	-		PFLU_RS12525	0.22	+0.2
2,826,198	-		PFLU_RS12525	0.22	-1.8
2,826,198	-		PFLU_RS12525	0.22	-3.5
2,826,236	+		PFLU_RS12525	0.24	+0.3
2,826,290	+		PFLU_RS12525	0.26	-0.4
2,826,290	+		PFLU_RS12525	0.26	+0.1
2,826,290	+		PFLU_RS12525	0.26	-1.0
2,826,290	+		PFLU_RS12525	0.26	+0.3
2,826,291	-		PFLU_RS12525	0.26	-1.4
2,826,291	-		PFLU_RS12525	0.26	+0.9
2,826,291	-		PFLU_RS12525	0.26	-1.2
2,826,291	-		PFLU_RS12525	0.26	-0.0
2,826,396	-		PFLU_RS12525	0.31	-1.7
2,826,405	-		PFLU_RS12525	0.32	+0.9
2,826,431	+		PFLU_RS12525	0.33	-0.7
2,826,431	+		PFLU_RS12525	0.33	-1.5
2,826,431	+		PFLU_RS12525	0.33	-2.1
2,826,431	+		PFLU_RS12525	0.33	-1.1
2,826,432	-		PFLU_RS12525	0.33	+0.9
2,826,461	+		PFLU_RS12525	0.34	-0.3
2,826,461	+		PFLU_RS12525	0.34	+0.0
2,826,461	+		PFLU_RS12525	0.34	-1.7
2,826,461	+		PFLU_RS12525	0.34	-0.0
2,826,461	+		PFLU_RS12525	0.34	-0.3
2,826,461	+		PFLU_RS12525	0.34	+0.2
2,826,462	-		PFLU_RS12525	0.34	-0.8
2,826,462	-		PFLU_RS12525	0.34	+0.3
2,826,462	-		PFLU_RS12525	0.34	+0.5
2,826,462	-		PFLU_RS12525	0.34	-0.3
2,826,462	-		PFLU_RS12525	0.34	+1.5
2,826,462	-		PFLU_RS12525	0.34	+2.0
2,826,462	-		PFLU_RS12525	0.34	+0.8
2,826,462	-		PFLU_RS12525	0.34	+0.9
2,826,594	-		PFLU_RS12525	0.40	+1.3