Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12260

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
2,720,532	-		PFLU_RS30730	0.51	-1.7
2,720,549	-		PFLU_RS30730	0.53	+1.9
2,720,604	+		PFLU_RS30730	0.59	-0.1
2,720,667	-		PFLU_RS30730	0.65	+0.1
2,720,714	+		PFLU_RS30730	0.70	+0.9
2,720,825	+		PFLU_RS30730	0.82	+0.2
2,720,884	-		PFLU_RS30730	0.88	-0.5
2,720,971	-				+1.2
2,720,993	+				-1.1
2,720,993	+				-0.1
2,720,994	-				+0.5
2,721,008	+				+1.1
2,721,112	-				-0.3
2,721,142	-				-1.6
2,721,200	+				-0.3
2,721,230	+				-1.1
2,721,377	+		PFLU_RS12260	0.52	+1.2
2,721,416	+		PFLU_RS12260	0.66	+0.9
2,721,416	+		PFLU_RS12260	0.66	-0.0
2,721,417	-		PFLU_RS12260	0.66	+0.1
2,721,519	+				+0.5
2,721,519	+				-2.1
2,721,520	-				-0.1
2,721,520	-				-0.6
2,721,520	-				+0.5
2,721,525	+				+1.9
2,721,564	+				-1.6
2,721,565	-				+0.2
2,721,618	+				-0.1
2,721,618	+				+2.0
2,721,697	+				+1.3
2,721,697	+				+0.5
2,721,697	+				-0.7
2,721,698	-				+1.3
2,721,698	-				-0.8
2,721,725	+				-0.1
2,721,726	-				+0.4
2,721,734	+				-0.1
2,721,734	+				+0.2
2,721,735	-				-0.5
2,721,740	+				+0.6
2,721,740	+				+1.3
2,721,769	+				+0.5
2,721,780	+				-1.5
2,721,780	+				-0.7
2,721,800	+				-0.1
2,721,800	+				-0.1
2,721,800	+				-0.7
2,721,801	-				+0.5
2,721,827	+				-0.7
2,721,836	+				+0.5
2,721,850	-				-1.5
2,721,862	+		PFLU_RS12265	0.11	-1.3
2,721,862	+		PFLU_RS12265	0.11	-0.5
2,721,862	+		PFLU_RS12265	0.11	+0.3
2,721,862	+		PFLU_RS12265	0.11	-0.7
2,721,866	+		PFLU_RS12265	0.11	-0.1
2,721,867	-		PFLU_RS12265	0.11	+0.1
2,721,869	+		PFLU_RS12265	0.11	+0.5
2,721,869	+		PFLU_RS12265	0.11	-0.3
2,721,869	+		PFLU_RS12265	0.11	-1.7
2,721,869	+		PFLU_RS12265	0.11	+0.1
2,721,869	+		PFLU_RS12265	0.11	-0.3
2,721,869	+		PFLU_RS12265	0.11	-0.1
2,721,869	+		PFLU_RS12265	0.11	-1.9
2,721,869	+		PFLU_RS12265	0.11	+1.9
2,721,869	+		PFLU_RS12265	0.11	-0.7
2,721,870	-		PFLU_RS12265	0.11	+0.9
2,721,904	+		PFLU_RS12265	0.13	-0.8
2,721,904	+		PFLU_RS12265	0.13	-0.1
2,721,904	+		PFLU_RS12265	0.13	+0.7
2,721,904	+		PFLU_RS12265	0.13	-1.5
2,721,904	+		PFLU_RS12265	0.13	+1.5
2,721,904	+		PFLU_RS12265	0.13	+0.7
2,721,905	-		PFLU_RS12265	0.13	+0.9
2,721,905	-		PFLU_RS12265	0.13	+0.8
2,721,905	-		PFLU_RS12265	0.13	+1.5
2,721,905	-		PFLU_RS12265	0.13	+1.5
2,721,905	-		PFLU_RS12265	0.13	+0.7
2,721,905	-		PFLU_RS12265	0.13	-0.9
2,721,905	-		PFLU_RS12265	0.13	+0.2
2,721,905	-		PFLU_RS12265	0.13	-0.4
2,721,905	-		PFLU_RS12265	0.13	-1.7
2,721,905	-		PFLU_RS12265	0.13	-0.7
2,721,905	-		PFLU_RS12265	0.13	+0.5
2,721,905	-		PFLU_RS12265	0.13	+1.2
2,721,905	-		PFLU_RS12265	0.13	+0.5
2,721,923	+		PFLU_RS12265	0.13	-1.4
2,721,941	+		PFLU_RS12265	0.14	+0.3
2,721,942	-		PFLU_RS12265	0.14	+0.6
2,721,942	-		PFLU_RS12265	0.14	+1.3
2,721,985	-		PFLU_RS12265	0.16	+0.4
2,721,985	-		PFLU_RS12265	0.16	-0.4
2,722,009	+		PFLU_RS12265	0.18	+1.9
2,722,032	-		PFLU_RS12265	0.19	+0.5
2,722,150	-		PFLU_RS12265	0.24	-0.1
2,722,179	-		PFLU_RS12265	0.26	-1.2
2,722,195	+		PFLU_RS12265	0.27	-1.2
2,722,276	+		PFLU_RS12265	0.30	+0.9
2,722,276	+		PFLU_RS12265	0.30	+2.0
2,722,276	+		PFLU_RS12265	0.30	+0.3
2,722,276	+		PFLU_RS12265	0.30	-0.9
2,722,276	+		PFLU_RS12265	0.30	+0.9
2,722,276	+		PFLU_RS12265	0.30	-0.5
2,722,276	+		PFLU_RS12265	0.30	-0.7
2,722,277	-		PFLU_RS12265	0.30	-0.9
2,722,277	-		PFLU_RS12265	0.30	+0.1
2,722,277	-		PFLU_RS12265	0.30	+0.4
2,722,277	-		PFLU_RS12265	0.30	-0.3
2,722,283	+		PFLU_RS12265	0.31	-1.3
2,722,283	+		PFLU_RS12265	0.31	-0.4
2,722,283	+		PFLU_RS12265	0.31	+1.9
2,722,284	-		PFLU_RS12265	0.31	-0.5
2,722,284	-		PFLU_RS12265	0.31	-1.5
2,722,284	-		PFLU_RS12265	0.31	+0.3
2,722,314	+		PFLU_RS12265	0.32	-0.5
2,722,314	+		PFLU_RS12265	0.32	-2.1
2,722,314	+		PFLU_RS12265	0.32	-0.5
2,722,315	-		PFLU_RS12265	0.32	-0.1
2,722,315	-		PFLU_RS12265	0.32	-2.4
2,722,315	-		PFLU_RS12265	0.32	+1.2
2,722,315	-		PFLU_RS12265	0.32	+0.9
2,722,315	-		PFLU_RS12265	0.32	+0.8
2,722,315	-		PFLU_RS12265	0.32	+1.5
2,722,331	+		PFLU_RS12265	0.33	-1.5
2,722,331	+		PFLU_RS12265	0.33	+1.1
2,722,332	-		PFLU_RS12265	0.33	-0.1
2,722,332	-		PFLU_RS12265	0.33	+1.0
2,722,332	-		PFLU_RS12265	0.33	-0.1
2,722,359	-		PFLU_RS12265	0.34	+0.6
2,722,410	-		PFLU_RS12265	0.37	-1.2
2,722,431	+		PFLU_RS12265	0.38	+1.4
2,722,432	-		PFLU_RS12265	0.38	-1.3