Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12170

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
2,698,098	+		PFLU_RS12160	0.71	+0.2
2,698,111	+		PFLU_RS12160	0.72	+0.4
2,698,509	+				-1.7
2,698,575	+				-1.2
2,698,576	-				+0.6
2,698,837	+				+0.5
2,698,837	+				-0.1
2,698,837	+				+0.0
2,698,837	+				-1.0
2,698,838	-				+0.5
2,698,838	-				+0.9
2,698,848	-				+0.4
2,698,857	+				+1.5
2,698,857	+				+0.9
2,698,857	+				-0.2
2,698,861	+				-1.2
2,698,861	+				+0.1
2,698,861	+				+0.0
2,698,861	+				-0.9
2,698,861	+				+0.7
2,698,861	+				-1.2
2,698,861	+				-0.7
2,698,861	+				+0.6
2,698,861	+				-1.3
2,698,861	+				+1.2
2,698,862	-				+0.1
2,698,862	-				-0.4
2,698,862	-				+0.2
2,698,862	-				-0.1
2,698,862	-				-0.4
2,698,862	-				-0.7
2,698,862	-				-0.3
2,698,863	+				+1.2
2,698,863	+				-1.5
2,698,863	+				-1.5
2,698,863	+				-0.0
2,698,863	+				+0.1
2,698,863	+				-0.0
2,698,863	+				+0.3
2,698,863	+				+1.6
2,698,863	+				-0.3
2,698,863	+				+1.3
2,698,863	+				+0.6
2,698,864	-				-1.2
2,698,864	-				+0.1
2,698,864	-				-0.4
2,698,864	-				-0.5
2,698,864	-				-0.5
2,698,864	-				+0.6
2,698,864	-				-2.5
2,698,873	+				-1.5
2,698,873	+				+0.9
2,698,873	+				-0.1
2,698,874	-				-1.6
2,698,874	-				-0.7
2,698,874	-				+2.2
2,698,879	+				-0.8
2,698,879	+				-0.4
2,698,886	-				-0.7
2,698,925	-				+0.3
2,699,029	+		PFLU_RS12170	0.33	+0.3
2,699,030	-		PFLU_RS12170	0.34	+0.4
2,699,030	-		PFLU_RS12170	0.34	-0.2
2,699,049	+		PFLU_RS12170	0.38	+2.1
2,699,050	-		PFLU_RS12170	0.39	-0.7
2,699,055	+		PFLU_RS12170	0.40	+0.0
2,699,071	+		PFLU_RS12170	0.44	-0.5
2,699,071	+		PFLU_RS12170	0.44	+0.3
2,699,071	+		PFLU_RS12170	0.44	+1.1
2,699,072	-		PFLU_RS12170	0.44	+1.0
2,699,072	-		PFLU_RS12170	0.44	+0.1
2,699,072	-		PFLU_RS12170	0.44	-0.2
2,699,091	+		PFLU_RS12170	0.49	-1.1
2,699,100	+		PFLU_RS12170	0.51	+0.9
2,699,100	+		PFLU_RS12170	0.51	+1.3
2,699,145	+		PFLU_RS12170	0.63	+0.4
2,699,232	+		PFLU_RS12170	0.85	+1.1
2,699,233	-		PFLU_RS12170	0.85	-0.2
2,699,233	-		PFLU_RS12170	0.85	+0.1
2,699,233	-		PFLU_RS12170	0.85	-0.5
2,699,233	-		PFLU_RS12170	0.85	+1.5
2,699,267	+				-1.8
2,699,267	+				+2.0
2,699,267	+				+0.9
2,699,267	+				-1.1
2,699,268	-				+0.1
2,699,292	+				+0.3
2,699,293	-				-0.1
2,699,298	+				+0.7
2,699,298	+				+0.7
2,699,298	+				+0.3
2,699,298	+				+0.0
2,699,299	-				+0.6
2,699,299	-				+0.3
2,699,299	-				+1.5
2,699,366	+				+0.5
2,699,366	+				+1.5
2,699,366	+				+2.5
2,699,366	+				-0.9
2,699,366	+				-0.2
2,699,367	-				+0.7
2,699,367	-				+0.5
2,699,367	-				+0.7
2,699,369	+				+0.4
2,699,369	+				-2.5
2,699,369	+				-0.5
2,699,369	+				-1.5
2,699,370	-				+0.0
2,699,370	-				+0.3
2,699,373	+				+0.7
2,699,373	+				+0.7
2,699,373	+				-0.9
2,699,373	+				+0.4
2,699,374	-				-1.7
2,699,374	-				-0.6
2,699,374	-				-0.3
2,699,386	+				-0.9
2,699,386	+				+1.3
2,699,387	-				-1.5
2,699,387	-				+0.3
2,699,387	-				-1.1
2,699,397	+				-1.1
2,699,397	+				+0.1
2,699,397	+				-0.1
2,699,397	+				-0.0
2,699,397	+				+1.1
2,699,397	+				+0.6
2,699,397	+				+0.7
2,699,398	-				-0.2
2,699,398	-				+1.9
2,699,398	-				-1.1
2,699,398	-				+0.4
2,699,411	+				-0.1
2,699,426	-				+0.7