Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11380

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
2,523,836	+		PFLU_RS11375	0.69	+0.6
2,523,837	-		PFLU_RS11375	0.69	-1.4
2,523,960	-		PFLU_RS11375	0.73	+0.3
2,523,960	-		PFLU_RS11375	0.73	-0.2
2,523,960	-		PFLU_RS11375	0.73	-0.2
2,523,989	+		PFLU_RS11375	0.74	+0.1
2,523,989	+		PFLU_RS11375	0.74	-1.7
2,523,989	+		PFLU_RS11375	0.74	-0.7
2,523,989	+		PFLU_RS11375	0.74	+0.1
2,523,989	+		PFLU_RS11375	0.74	+0.0
2,523,989	+		PFLU_RS11375	0.74	+1.6
2,523,990	-		PFLU_RS11375	0.74	-1.1
2,523,990	-		PFLU_RS11375	0.74	+0.0
2,523,990	-		PFLU_RS11375	0.74	-1.7
2,524,247	+		PFLU_RS11375	0.83	+0.7
2,524,247	+		PFLU_RS11375	0.83	-0.1
2,524,247	+		PFLU_RS11375	0.83	+0.2
2,524,248	-		PFLU_RS11375	0.83	-0.2
2,524,248	-		PFLU_RS11375	0.83	+1.2
2,524,260	-		PFLU_RS11375	0.84	+1.9
2,524,260	-		PFLU_RS11375	0.84	+0.7
2,524,260	-		PFLU_RS11375	0.84	+0.8
2,524,260	-		PFLU_RS11375	0.84	-0.1
2,524,260	-		PFLU_RS11375	0.84	-0.3
2,524,262	+		PFLU_RS11375	0.84	-0.7
2,524,352	+		PFLU_RS11375	0.87	+1.3
2,524,353	-		PFLU_RS11375	0.87	+0.3
2,524,365	-		PFLU_RS11375	0.87	-0.1
2,524,365	-		PFLU_RS11375	0.87	-0.0
2,524,367	+		PFLU_RS11375	0.88	+0.7
2,524,368	-		PFLU_RS11375	0.88	+0.6
2,524,368	-		PFLU_RS11375	0.88	+0.3
2,524,368	-		PFLU_RS11375	0.88	-0.7
2,524,489	+				+0.9
2,524,492	+				+2.2
2,524,492	+				-0.4
2,524,492	+				-0.8
2,524,492	+				-0.3
2,524,493	-				-0.8
2,524,493	-				+0.6
2,524,493	-				+1.4
2,524,493	-				-1.5
2,524,493	-				-0.7
2,524,571	+				+0.9
2,524,571	+				-0.2
2,524,572	-				+0.7
2,524,572	-				-2.0
2,524,840	+		PFLU_RS11380	0.38	+1.2
2,524,906	+		PFLU_RS11380	0.60	+1.9
2,524,906	+		PFLU_RS11380	0.60	+0.0
2,525,219	+		PFLU_RS11385	0.15	+0.2
2,525,219	+		PFLU_RS11385	0.15	-0.8
2,525,219	+		PFLU_RS11385	0.15	+0.3
2,525,220	-		PFLU_RS11385	0.15	+0.9
2,525,220	-		PFLU_RS11385	0.15	+0.5
2,525,256	-		PFLU_RS11385	0.18	-0.4
2,525,444	+		PFLU_RS11385	0.33	+0.4
2,525,445	-		PFLU_RS11385	0.33	+1.9
2,525,445	-		PFLU_RS11385	0.33	+0.1
2,525,445	-		PFLU_RS11385	0.33	-0.5
2,525,445	-		PFLU_RS11385	0.33	-0.9
2,525,467	+		PFLU_RS11385	0.35	-0.3
2,525,468	-		PFLU_RS11385	0.35	+1.7
2,525,468	-		PFLU_RS11385	0.35	-0.6
2,525,808	+		PFLU_RS11385	0.62	+1.8
2,525,951	+		PFLU_RS11385	0.74	+0.9
2,525,951	+		PFLU_RS11385	0.74	+1.4
2,525,951	+		PFLU_RS11385	0.74	+0.3
2,525,951	+		PFLU_RS11385	0.74	-0.1
2,525,951	+		PFLU_RS11385	0.74	-0.4
2,525,951	+		PFLU_RS11385	0.74	+2.9
2,525,951	+		PFLU_RS11385	0.74	-0.8
2,525,952	-		PFLU_RS11385	0.74	+0.5
2,525,952	-		PFLU_RS11385	0.74	+0.8
2,525,952	-		PFLU_RS11385	0.74	-0.4