Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10285

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
2,266,990	+				-0.7
2,266,990	+				-0.6
2,266,990	+				+1.0
2,266,990	+				-0.1
2,266,991	-				-1.3
2,266,991	-				+0.5
2,266,991	-				+0.2
2,267,075	+		PFLU_RS10280	0.17	-1.1
2,267,075	+		PFLU_RS10280	0.17	-0.3
2,267,076	-		PFLU_RS10280	0.17	-0.4
2,267,076	-		PFLU_RS10280	0.17	+0.4
2,267,178	+		PFLU_RS10280	0.28	+1.8
2,267,178	+		PFLU_RS10280	0.28	+0.4
2,267,178	+		PFLU_RS10280	0.28	-0.1
2,267,178	+		PFLU_RS10280	0.28	+0.5
2,267,178	+		PFLU_RS10280	0.28	+1.3
2,267,178	+		PFLU_RS10280	0.28	-0.3
2,267,178	+		PFLU_RS10280	0.28	+0.3
2,267,178	+		PFLU_RS10280	0.28	+0.0
2,267,178	+		PFLU_RS10280	0.28	+0.7
2,267,178	+		PFLU_RS10280	0.28	+0.8
2,267,178	+		PFLU_RS10280	0.28	-0.3
2,267,178	+		PFLU_RS10280	0.28	-1.9
2,267,178	+		PFLU_RS10280	0.28	-0.0
2,267,178	+		PFLU_RS10280	0.28	-0.6
2,267,179	-		PFLU_RS10280	0.28	-0.6
2,267,179	-		PFLU_RS10280	0.28	+1.0
2,267,179	-		PFLU_RS10280	0.28	-0.2
2,267,179	-		PFLU_RS10280	0.28	+0.0
2,267,179	-		PFLU_RS10280	0.28	-1.2
2,267,179	-		PFLU_RS10280	0.28	+1.0
2,267,179	-		PFLU_RS10280	0.28	-0.2
2,267,179	-		PFLU_RS10280	0.28	-1.0
2,267,179	-		PFLU_RS10280	0.28	+0.0
2,267,179	-		PFLU_RS10280	0.28	+1.0
2,267,179	-		PFLU_RS10280	0.28	-1.1
2,267,179	-		PFLU_RS10280	0.28	-0.3
2,267,179	-		PFLU_RS10280	0.28	+0.1
2,267,179	-		PFLU_RS10280	0.28	-2.3
2,267,179	-		PFLU_RS10280	0.28	-0.6
2,267,179	-		PFLU_RS10280	0.28	-0.9
2,267,179	-		PFLU_RS10280	0.28	-2.6
2,267,179	-		PFLU_RS10280	0.28	-2.8
2,267,197	-		PFLU_RS10280	0.30	+1.6
2,267,256	+		PFLU_RS10280	0.37	-1.0
2,267,256	+		PFLU_RS10280	0.37	-1.0
2,267,257	-		PFLU_RS10280	0.37	+0.0
2,267,303	+		PFLU_RS10280	0.42	+1.0
2,267,303	+		PFLU_RS10280	0.42	+0.0
2,267,303	+		PFLU_RS10280	0.42	+0.0
2,267,303	+		PFLU_RS10280	0.42	+0.8
2,267,303	+		PFLU_RS10280	0.42	-0.2
2,267,303	+		PFLU_RS10280	0.42	+0.9
2,267,303	+		PFLU_RS10280	0.42	+1.5
2,267,303	+		PFLU_RS10280	0.42	-0.2
2,267,303	+		PFLU_RS10280	0.42	-0.2
2,267,303	+		PFLU_RS10280	0.42	-1.3
2,267,304	-		PFLU_RS10280	0.42	+0.6
2,267,304	-		PFLU_RS10280	0.42	-0.1
2,267,304	-		PFLU_RS10280	0.42	+1.5
2,267,304	-		PFLU_RS10280	0.42	+0.2
2,267,304	-		PFLU_RS10280	0.42	+1.0
2,267,304	-		PFLU_RS10280	0.42	+0.1
2,267,304	-		PFLU_RS10280	0.42	-0.6
2,267,304	-		PFLU_RS10280	0.42	-1.5
2,267,304	-		PFLU_RS10280	0.42	+0.2
2,267,304	-		PFLU_RS10280	0.42	+1.1
2,267,304	-		PFLU_RS10280	0.42	-0.6
2,267,304	-		PFLU_RS10280	0.42	-0.2
2,267,364	+		PFLU_RS10280	0.49	+0.0
2,267,364	+		PFLU_RS10280	0.49	+0.3
2,267,364	+		PFLU_RS10280	0.49	-0.2
2,267,365	-		PFLU_RS10280	0.49	+1.1
2,267,365	-		PFLU_RS10280	0.49	-0.6
2,267,365	-		PFLU_RS10280	0.49	+0.2
2,267,374	-		PFLU_RS10280	0.50	-0.6
2,267,439	+		PFLU_RS10280	0.57	-0.3
2,267,439	+		PFLU_RS10280	0.57	+0.5
2,267,439	+		PFLU_RS10280	0.57	+0.2
2,267,439	+		PFLU_RS10280	0.57	+0.6
2,267,439	+		PFLU_RS10280	0.57	+1.5
2,267,439	+		PFLU_RS10280	0.57	-0.3
2,267,440	-		PFLU_RS10280	0.57	-0.3
2,267,440	-		PFLU_RS10280	0.57	+1.0
2,267,494	+		PFLU_RS10280	0.63	+1.0
2,267,495	-		PFLU_RS10280	0.63	-0.8
2,267,495	-		PFLU_RS10280	0.63	-0.1
2,267,495	-		PFLU_RS10280	0.63	-0.3
2,267,623	+		PFLU_RS10280	0.77	+0.4
2,267,623	+		PFLU_RS10280	0.77	-0.2
2,267,706	+		PFLU_RS10280	0.86	-0.2
2,267,778	+				-1.1
2,267,778	+				-0.0
2,267,778	+				+0.2
2,267,778	+				-0.3
2,267,779	-				-0.1
2,267,779	-				-1.0
2,267,779	-				+0.2
2,267,779	-				-0.9
2,267,779	-				+0.0
2,267,993	+				-0.2
2,267,993	+				-1.0
2,267,993	+				-1.6
2,267,994	-				+0.7
2,267,994	-				+1.0
2,268,050	+				-0.1
2,268,050	+				-0.2
2,268,050	+				+1.9
2,268,051	-				+2.0
2,268,091	+				+2.0
2,268,092	-				+2.0
2,268,181	+		PFLU_RS10285	0.12	-0.3
2,268,181	+		PFLU_RS10285	0.12	+0.1
2,268,260	-		PFLU_RS10285	0.17	-1.4
2,268,267	-		PFLU_RS10285	0.17	-1.1
2,268,267	-		PFLU_RS10285	0.17	-0.2
2,268,276	+		PFLU_RS10285	0.17	-0.4
2,268,277	-		PFLU_RS10285	0.17	-0.5
2,268,390	-		PFLU_RS10285	0.24	+0.1
2,268,445	+		PFLU_RS10285	0.27	-0.3
2,268,445	+		PFLU_RS10285	0.27	+0.0
2,268,446	-		PFLU_RS10285	0.27	-1.3
2,268,446	-		PFLU_RS10285	0.27	+1.4
2,268,446	-		PFLU_RS10285	0.27	+0.0
2,268,694	+		PFLU_RS10285	0.40	+0.6
2,268,695	-		PFLU_RS10285	0.40	+0.2
2,268,695	-		PFLU_RS10285	0.40	+0.0
2,268,695	-		PFLU_RS10285	0.40	+0.9
2,268,718	+		PFLU_RS10285	0.42	+1.2
2,268,718	+		PFLU_RS10285	0.42	+1.6
2,268,718	+		PFLU_RS10285	0.42	+0.3
2,268,718	+		PFLU_RS10285	0.42	+0.1
2,268,718	+		PFLU_RS10285	0.42	+1.0
2,268,718	+		PFLU_RS10285	0.42	+1.0
2,268,718	+		PFLU_RS10285	0.42	+2.4
2,268,718	+		PFLU_RS10285	0.42	-0.6
2,268,718	+		PFLU_RS10285	0.42	+0.0
2,268,718	+		PFLU_RS10285	0.42	-0.1
2,268,718	+		PFLU_RS10285	0.42	+0.1
2,268,718	+		PFLU_RS10285	0.42	-0.4
2,268,718	+		PFLU_RS10285	0.42	+0.2
2,268,718	+		PFLU_RS10285	0.42	+0.0
2,268,718	+		PFLU_RS10285	0.42	-0.7
2,268,718	+		PFLU_RS10285	0.42	+0.6
2,268,718	+		PFLU_RS10285	0.42	-0.1
2,268,719	-		PFLU_RS10285	0.42	+1.0
2,268,719	-		PFLU_RS10285	0.42	+0.7
2,268,719	-		PFLU_RS10285	0.42	+0.3
2,268,719	-		PFLU_RS10285	0.42	+2.8
2,268,719	-		PFLU_RS10285	0.42	+0.0
2,268,719	-		PFLU_RS10285	0.42	-0.2
2,268,719	-		PFLU_RS10285	0.42	+0.9
2,268,719	-		PFLU_RS10285	0.42	+0.4
2,268,719	-		PFLU_RS10285	0.42	-0.9
2,268,838	+		PFLU_RS10285	0.48	+0.2
2,268,845	+		PFLU_RS10285	0.49	+1.0
2,268,846	-		PFLU_RS10285	0.49	-1.3
2,268,902	+		PFLU_RS10285	0.52	-0.3
2,268,902	+		PFLU_RS10285	0.52	+0.4
2,268,902	+		PFLU_RS10285	0.52	-0.3
2,268,902	+		PFLU_RS10285	0.52	-1.3
2,268,903	-		PFLU_RS10285	0.52	-0.1
2,268,903	-		PFLU_RS10285	0.52	+0.6
2,268,903	-		PFLU_RS10285	0.52	+1.0
2,268,903	-		PFLU_RS10285	0.52	-0.5
2,268,904	+		PFLU_RS10285	0.52	+0.3
2,268,904	+		PFLU_RS10285	0.52	+0.7
2,268,904	+		PFLU_RS10285	0.52	+0.2
2,268,904	+		PFLU_RS10285	0.52	-0.4
2,268,904	+		PFLU_RS10285	0.52	-0.4
2,268,905	-		PFLU_RS10285	0.52	-0.5
2,268,905	-		PFLU_RS10285	0.52	-0.1
2,268,905	-		PFLU_RS10285	0.52	+0.3
2,268,905	-		PFLU_RS10285	0.52	+0.6
2,268,905	-		PFLU_RS10285	0.52	-0.3
2,268,905	-		PFLU_RS10285	0.52	-1.1
2,268,980	-		PFLU_RS10285	0.56	-0.3
2,268,986	-		PFLU_RS10285	0.56	-0.5
2,268,986	-		PFLU_RS10285	0.56	-0.8
2,269,123	+		PFLU_RS10285	0.64	-0.3
2,269,124	-		PFLU_RS10285	0.64	-0.3
2,269,124	-		PFLU_RS10285	0.64	+0.2
2,269,124	-		PFLU_RS10285	0.64	-1.2
2,269,124	-		PFLU_RS10285	0.64	-2.4
2,269,387	+		PFLU_RS10285	0.78	-0.5
2,269,388	-		PFLU_RS10285	0.78	-0.8
2,269,388	-		PFLU_RS10285	0.78	+1.7
2,269,388	-		PFLU_RS10285	0.78	+1.0
2,269,437	+		PFLU_RS10285	0.81	-0.8
2,269,564	+		PFLU_RS10285	0.88	-0.1
2,269,564	+		PFLU_RS10285	0.88	+0.4
2,269,564	+		PFLU_RS10285	0.88	+0.4
2,269,564	+		PFLU_RS10285	0.88	+0.0
2,269,564	+		PFLU_RS10285	0.88	-1.3
2,269,564	+		PFLU_RS10285	0.88	-0.4
2,269,564	+		PFLU_RS10285	0.88	+1.6
2,269,564	+		PFLU_RS10285	0.88	+0.0
2,269,564	+		PFLU_RS10285	0.88	+0.0
2,269,564	+		PFLU_RS10285	0.88	+0.9
2,269,565	-		PFLU_RS10285	0.88	+0.0
2,269,565	-		PFLU_RS10285	0.88	-1.0
2,269,565	-		PFLU_RS10285	0.88	-0.7
2,269,704	+				+3.3
2,269,705	-				+0.4
2,269,841	-				-0.2
2,269,847	+				+0.1
2,269,847	+				-0.4
2,269,848	-				-0.7
2,269,848	-				+0.2
2,269,848	-				-0.4
2,269,848	-				-0.4
2,270,084	+		PFLU_RS10290	0.38	+0.8
2,270,084	+		PFLU_RS10290	0.38	-0.1
2,270,084	+		PFLU_RS10290	0.38	+1.2
2,270,084	+		PFLU_RS10290	0.38	-0.4
2,270,085	-		PFLU_RS10290	0.38	+1.3
2,270,374	+		PFLU_RS10290	0.75	+0.3
2,270,374	+		PFLU_RS10290	0.75	+0.6
2,270,374	+		PFLU_RS10290	0.75	-1.0
2,270,374	+		PFLU_RS10290	0.75	+0.3
2,270,375	-		PFLU_RS10290	0.75	-0.1
2,270,375	-		PFLU_RS10290	0.75	-1.5
2,270,375	-		PFLU_RS10290	0.75	+1.0
2,270,465	+		PFLU_RS10290	0.86	+0.1
2,270,465	+		PFLU_RS10290	0.86	+0.0
2,270,465	+		PFLU_RS10290	0.86	-2.2
2,270,465	+		PFLU_RS10290	0.86	-0.9
2,270,465	+		PFLU_RS10290	0.86	+0.7
2,270,466	-		PFLU_RS10290	0.86	-0.9
2,270,466	-		PFLU_RS10290	0.86	+0.7
2,270,571	+				+2.0
2,270,571	+				-1.2
2,270,571	+				+0.4
2,270,571	+				+0.0
2,270,571	+				-0.5
2,270,572	-				+0.3
2,270,572	-				+0.9
2,270,572	-				+0.0
2,270,572	-				+0.5
2,270,572	-				+2.6
2,270,572	-				-0.1
2,270,592	-				+0.3
2,270,592	-				-0.0
2,270,592	-				-0.8
2,270,595	+				+1.0
2,270,595	+				-0.6
2,270,595	+				+0.4
2,270,595	+				+0.0
2,270,595	+				+0.0
2,270,595	+				-0.4
2,270,596	-				+0.0
2,270,596	-				-1.0
2,270,596	-				-0.5
2,270,596	-				-1.2
2,270,596	-				+0.3
2,270,596	-				+1.0
2,270,596	-				-1.0
2,270,609	+				-0.6
2,270,609	+				+0.5
2,270,610	-				-0.3
2,270,653	-				+0.9
2,270,659	+				+1.4
2,270,659	+				+1.0
2,270,660	-				+0.4
2,270,660	-				-1.5
2,270,706	+				+1.7
2,270,761	+				+1.2
2,270,761	+				+1.6
2,270,762	-				-1.0
2,270,763	+				+0.0
2,270,763	+				-1.0
2,270,763	+				-0.3
2,270,763	+				+0.5
2,270,764	-				-0.5
2,270,764	-				-0.3
2,270,764	-				+0.2
2,270,764	-				+0.0
2,270,764	-				+0.6