Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09680

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
2,137,115	+				+1.5
2,137,357	-		PFLU_RS09670	0.55	-0.1
2,137,463	-		PFLU_RS09670	0.76	-0.2
2,137,463	-		PFLU_RS09670	0.76	-0.5
2,137,490	+		PFLU_RS09670	0.81	+0.1
2,137,514	-		PFLU_RS09670	0.86	-1.2
2,137,559	+				+0.5
2,137,559	+				+0.5
2,137,560	-				-1.2
2,137,560	-				-0.2
2,137,560	-				+0.3
2,137,662	+		PFLU_RS09675	0.15	+0.9
2,137,662	+		PFLU_RS09675	0.15	+0.5
2,137,662	+		PFLU_RS09675	0.15	-0.1
2,137,663	-		PFLU_RS09675	0.15	-0.3
2,137,663	-		PFLU_RS09675	0.15	-0.3
2,137,663	-		PFLU_RS09675	0.15	+0.4
2,137,663	-		PFLU_RS09675	0.15	+0.2
2,137,663	-		PFLU_RS09675	0.15	-0.6
2,137,663	-		PFLU_RS09675	0.15	+0.1
2,137,663	-		PFLU_RS09675	0.15	-1.2
2,137,663	-		PFLU_RS09675	0.15	-1.3
2,137,664	+		PFLU_RS09675	0.15	+0.3
2,137,664	+		PFLU_RS09675	0.15	+1.2
2,137,664	+		PFLU_RS09675	0.15	+0.8
2,137,664	+		PFLU_RS09675	0.15	-0.3
2,137,664	+		PFLU_RS09675	0.15	-1.6
2,137,665	-		PFLU_RS09675	0.15	-0.1
2,137,665	-		PFLU_RS09675	0.15	-1.2
2,137,665	-		PFLU_RS09675	0.15	-1.7
2,137,665	-		PFLU_RS09675	0.15	+0.4
2,137,665	-		PFLU_RS09675	0.15	+0.6
2,137,701	+		PFLU_RS09675	0.22	-0.9
2,138,012	+		PFLU_RS09675	0.79	-0.3
2,138,012	+		PFLU_RS09675	0.79	+0.1
2,138,012	+		PFLU_RS09675	0.79	-1.0
2,138,013	-		PFLU_RS09675	0.79	-0.1
2,138,013	-		PFLU_RS09675	0.79	-1.4
2,138,013	-		PFLU_RS09675	0.79	-0.3
2,138,013	-		PFLU_RS09675	0.79	-0.7
2,138,013	-		PFLU_RS09675	0.79	-0.8
2,138,013	-		PFLU_RS09675	0.79	-0.5
2,138,105	+				-2.3
2,138,105	+				-0.1
2,138,207	+		PFLU_RS09680	0.13	+0.2
2,138,208	-		PFLU_RS09680	0.13	+0.4
2,138,266	+		PFLU_RS09680	0.22	-0.4
2,138,304	+		PFLU_RS09680	0.27	-0.2
2,138,304	+		PFLU_RS09680	0.27	-0.5
2,138,304	+		PFLU_RS09680	0.27	+0.6
2,138,304	+		PFLU_RS09680	0.27	+0.2
2,138,304	+		PFLU_RS09680	0.27	+1.5
2,138,305	-		PFLU_RS09680	0.27	-0.6
2,138,305	-		PFLU_RS09680	0.27	+1.5
2,138,305	-		PFLU_RS09680	0.27	-0.8
2,138,305	-		PFLU_RS09680	0.27	+1.5
2,138,305	-		PFLU_RS09680	0.27	-0.3
2,138,308	+		PFLU_RS09680	0.27	-0.0
2,138,481	+		PFLU_RS09680	0.51	+0.1
2,138,481	+		PFLU_RS09680	0.51	-2.2
2,138,481	+		PFLU_RS09680	0.51	-0.7
2,138,481	+		PFLU_RS09680	0.51	-0.6
2,138,482	-		PFLU_RS09680	0.52	+0.7
2,138,482	-		PFLU_RS09680	0.52	+1.5
2,138,482	-		PFLU_RS09680	0.52	+0.5
2,138,498	+		PFLU_RS09680	0.54	-0.2
2,138,498	+		PFLU_RS09680	0.54	-1.0
2,138,531	+		PFLU_RS09680	0.58	-0.6
2,138,532	-		PFLU_RS09680	0.58	-1.2
2,138,537	+		PFLU_RS09680	0.59	-0.5
2,138,538	-		PFLU_RS09680	0.59	+0.3
2,138,548	-		PFLU_RS09680	0.61	-0.6
2,139,228	-		PFLU_RS09685	0.58	+0.6
2,139,266	-		PFLU_RS09685	0.63	-0.2
2,139,407	+		PFLU_RS09685	0.84	-0.0
2,139,407	+		PFLU_RS09685	0.84	-0.7
2,139,407	+		PFLU_RS09685	0.84	-0.5
2,139,408	-		PFLU_RS09685	0.85	+0.4
2,139,426	+		PFLU_RS09685	0.87	-0.0
2,139,427	-		PFLU_RS09685	0.87	+1.7
2,139,435	+		PFLU_RS09685	0.89	+0.6
2,139,436	-		PFLU_RS09685	0.89	-0.0
2,139,436	-		PFLU_RS09685	0.89	-0.9
2,139,436	-		PFLU_RS09685	0.89	-0.4
2,139,646	+		PFLU_RS09690	0.25	+0.5
2,139,646	+		PFLU_RS09690	0.25	-0.2
2,139,646	+		PFLU_RS09690	0.25	-0.1
2,139,646	+		PFLU_RS09690	0.25	+0.5
2,139,646	+		PFLU_RS09690	0.25	-0.4
2,139,763	+		PFLU_RS09690	0.47	+0.6
2,139,763	+		PFLU_RS09690	0.47	+0.1
2,139,763	+		PFLU_RS09690	0.47	+0.1
2,139,763	+		PFLU_RS09690	0.47	-0.0
2,139,763	+		PFLU_RS09690	0.47	-0.5
2,139,764	-		PFLU_RS09690	0.47	-0.6
2,139,764	-		PFLU_RS09690	0.47	+0.2
2,139,764	-		PFLU_RS09690	0.47	+0.8
2,139,767	+		PFLU_RS09690	0.48	+0.4
2,139,767	+		PFLU_RS09690	0.48	-0.3
2,139,767	+		PFLU_RS09690	0.48	+1.1
2,139,768	-		PFLU_RS09690	0.48	-2.7
2,139,787	+		PFLU_RS09690	0.51	-1.4